RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 IKBKEQ14164 716 aa17.38■□□□□ 0.37
CAPN1-219ENST00000530495 KIAA0753Q2KHM9 967 aa17.38■□□□□ 0.37
CAPN1-219ENST00000530495 TCTN1Q2MV58 587 aa17.38■□□□□ 0.37
CAPN1-219ENST00000530495 TRIM71Q2Q1W2 868 aaKnown RBP17.38■□□□□ 0.37
CAPN1-219ENST00000530495 MYSM1Q5VVJ2 828 aa17.38■□□□□ 0.37
CAPN1-219ENST00000530495 KCNV1Q6PIU1 500 aa17.38■□□□□ 0.37
CAPN1-219ENST00000530495 TRAF7Q6Q0C0 670 aa17.38■□□□□ 0.37
CAPN1-219ENST00000530495 STAG2Q8N3U4 1231 aa17.38■□□□□ 0.37
CAPN1-219ENST00000530495 MTMR8Q96EF0 704 aa17.38■□□□□ 0.37
CAPN1-219ENST00000530495 RAD9AQ99638 391 aa17.38■□□□□ 0.37
CAPN1-219ENST00000530495 PDCD2LQ9BRP1 358 aa17.38■□□□□ 0.37
CAPN1-219ENST00000530495 UBAC1Q9BSL1 405 aa17.38■□□□□ 0.37
CAPN1-219ENST00000530495 COL4A4P53420 1690 aaPredicted RBP17.37■□□□□ 0.37
CAPN1-219ENST00000530495 KLRF2D3W0D1 207 aa17.37■□□□□ 0.37
CAPN1-219ENST00000530495 GJB5O95377 273 aa17.37■□□□□ 0.37
CAPN1-219ENST00000530495 IGHDP01880 384 aa17.37■□□□□ 0.37
CAPN1-219ENST00000530495 ZNF286BP0CG31 522 aa17.37■□□□□ 0.37
CAPN1-219ENST00000530495 SEC23AQ15436 765 aa17.37■□□□□ 0.37
CAPN1-219ENST00000530495 ZNF618Q5T7W0 954 aa17.37■□□□□ 0.37
CAPN1-219ENST00000530495 VSIG10LQ86VR7 867 aa17.37■□□□□ 0.37
CAPN1-219ENST00000530495 ZBTB5O15062 677 aa17.36■□□□□ 0.37
CAPN1-219ENST00000530495 PPP1R11O60927 126 aaPredicted RBP17.36■□□□□ 0.37
CAPN1-219ENST00000530495 TGFB3P10600 412 aa17.36■□□□□ 0.37
CAPN1-219ENST00000530495 MYCLP12524 364 aaPredicted RBP17.36■□□□□ 0.37
CAPN1-219ENST00000530495 ERVK-21P61565 698 aa17.36■□□□□ 0.37
CAPN1-219ENST00000530495 ZNF200P98182 395 aaPredicted RBP17.36■□□□□ 0.37
CAPN1-219ENST00000530495 HSDL1Q3SXM5 330 aa17.36■□□□□ 0.37
CAPN1-219ENST00000530495 CELF3Q5SZQ8 465 aaKnown RBP17.36■□□□□ 0.37
CAPN1-219ENST00000530495 IFIT1BQ5T764 474 aaKnown RBP17.36■□□□□ 0.37
CAPN1-219ENST00000530495 WNT8BQ93098 351 aa17.36■□□□□ 0.37
CAPN1-219ENST00000530495 SUGCTQ9HAC7 445 aa17.36■□□□□ 0.37
CAPN1-219ENST00000530495 MAD2L2Q9UI95 211 aa17.36■□□□□ 0.37
CAPN1-219ENST00000530495 PCDHA1Q9Y5I3 950 aa17.36■□□□□ 0.37
CAPN1-219ENST00000530495 PALM3A6NDB9 673 aaPredicted RBP17.35■□□□□ 0.37
CAPN1-219ENST00000530495 SP2Q02086 613 aa17.35■□□□□ 0.37
CAPN1-219ENST00000530495 HIC1Q14526 733 aa17.35■□□□□ 0.37
CAPN1-219ENST00000530495 MBTPS1Q14703 1052 aa17.35■□□□□ 0.37
CAPN1-219ENST00000530495 PGM5Q15124 567 aa17.35■□□□□ 0.37
CAPN1-219ENST00000530495 SPATA33Q96N06 139 aa17.35■□□□□ 0.37
CAPN1-219ENST00000530495 TGS1Q96RS0 853 aaKnown RBP17.35■□□□□ 0.37
CAPN1-219ENST00000530495 C16orf70Q9BSU1 422 aa17.35■□□□□ 0.37
CAPN1-219ENST00000530495 LINC01553A4QN01 128 aa17.34■□□□□ 0.37
CAPN1-219ENST00000530495 LGR5O75473 907 aa17.34■□□□□ 0.37
CAPN1-219ENST00000530495 SIP14410 1827 aa17.34■□□□□ 0.37
CAPN1-219ENST00000530495 HOXA13P31271 388 aaPredicted RBP17.34■□□□□ 0.37
CAPN1-219ENST00000530495 TRAF1Q13077 416 aa17.34■□□□□ 0.37
CAPN1-219ENST00000530495 SERINC5Q86VE9 423 aa17.34■□□□□ 0.37
CAPN1-219ENST00000530495 GDPD5Q8WTR4 605 aa17.34■□□□□ 0.37
CAPN1-219ENST00000530495 EPHX3Q9H6B9 360 aa17.34■□□□□ 0.37
CAPN1-219ENST00000530495 INSL6Q9Y581 213 aa17.34■□□□□ 0.37
CAPN1-219ENST00000530495 EMSYQ7Z589 1322 aa17.33■□□□□ 0.36
CAPN1-219ENST00000530495 GGPS1O95749 300 aa17.33■□□□□ 0.36
CAPN1-219ENST00000530495 MKRN4PQ13434 485 aaPredicted RBP17.33■□□□□ 0.36
CAPN1-219ENST00000530495 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.33■□□□□ 0.36
CAPN1-219ENST00000530495 CYB5R4Q7L1T6 521 aa17.33■□□□□ 0.36
CAPN1-219ENST00000530495 IL31RAQ8NI17 732 aa17.33■□□□□ 0.36
CAPN1-219ENST00000530495 RIOX1Q9H6W3 641 aa17.33■□□□□ 0.36
CAPN1-219ENST00000530495 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.32■□□□□ 0.36
CAPN1-219ENST00000530495 RSPH10B2B2RC85 870 aa17.32■□□□□ 0.36
CAPN1-219ENST00000530495 GCOM1H8Y6P7 765 aaPredicted RBP17.32■□□□□ 0.36
CAPN1-219ENST00000530495 SORBS3O60504 671 aa17.32■□□□□ 0.36
CAPN1-219ENST00000530495 RSPH10BP0C881 870 aa17.32■□□□□ 0.36
CAPN1-219ENST00000530495 POLR2MP0CAP2 368 aa17.32■□□□□ 0.36
CAPN1-219ENST00000530495 CCND2P30279 289 aa17.32■□□□□ 0.36
CAPN1-219ENST00000530495 PLA2G5P39877 138 aa17.32■□□□□ 0.36
CAPN1-219ENST00000530495 THPOP40225 353 aa17.32■□□□□ 0.36
CAPN1-219ENST00000530495 DBF4BQ8NFT6 615 aa17.32■□□□□ 0.36
CAPN1-219ENST00000530495 IL25Q9H293 177 aa17.32■□□□□ 0.36
CAPN1-219ENST00000530495 MLXIPQ9HAP2 919 aa17.32■□□□□ 0.36
CAPN1-219ENST00000530495 MTUS1Q9ULD2 1270 aa17.32■□□□□ 0.36
CAPN1-219ENST00000530495 H3BRB1 525 aa17.31■□□□□ 0.36
CAPN1-219ENST00000530495 UBA1P22314 1058 aaKnown RBP17.31■□□□□ 0.36
CAPN1-219ENST00000530495 HOXC8P31273 242 aa17.31■□□□□ 0.36
CAPN1-219ENST00000530495 HTRA4P83105 476 aaPredicted RBP17.31■□□□□ 0.36
CAPN1-219ENST00000530495 GRM4Q14833 912 aa17.31■□□□□ 0.36
CAPN1-219ENST00000530495 SLC35G1Q2M3R5 365 aa17.31■□□□□ 0.36
CAPN1-219ENST00000530495 PLEKHG4Q58EX7 1191 aa17.31■□□□□ 0.36
CAPN1-219ENST00000530495 FAM117BQ6P1L5 589 aa17.31■□□□□ 0.36
CAPN1-219ENST00000530495 GPKOWQ92917 476 aaPredicted RBP eCLIP17.31■□□□□ 0.36
CAPN1-219ENST00000530495 TUT1Q9H6E5 874 aaKnown RBP17.31■□□□□ 0.36
CAPN1-219ENST00000530495 MICAL3Q7RTP6 2002 aa17.31■□□□□ 0.36
CAPN1-219ENST00000530495 C17orf102A2RUQ5 167 aa17.3■□□□□ 0.36
CAPN1-219ENST00000530495 RBAK-RBAKDNI3L0D1 243 aa17.3■□□□□ 0.36
CAPN1-219ENST00000530495 AMHP03971 560 aa17.3■□□□□ 0.36
CAPN1-219ENST00000530495 FCHSD1Q86WN1 690 aa17.3■□□□□ 0.36
CAPN1-219ENST00000530495 HOMER1Q86YM7 354 aa17.3■□□□□ 0.36
CAPN1-219ENST00000530495 SP7Q8TDD2 431 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-219ENST00000530495 ATP6V0A1Q93050 837 aa17.3■□□□□ 0.36
CAPN1-219ENST00000530495 FAM122AQ96E09 287 aa17.3■□□□□ 0.36
CAPN1-219ENST00000530495 ZFP91Q96JP5 570 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-219ENST00000530495 PIGSQ96S52 555 aa17.3■□□□□ 0.36
CAPN1-219ENST00000530495 LRFN3Q9BTN0 628 aa17.3■□□□□ 0.36
CAPN1-219ENST00000530495 BCAS3Q9H6U6 928 aa17.3■□□□□ 0.36
CAPN1-219ENST00000530495 ARIH1Q9Y4X5 557 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-219ENST00000530495 BAZ2BQ9UIF8 2168 aaKnown RBP17.29■□□□□ 0.36
CAPN1-219ENST00000530495 PNMA6FA0A0J9YX94 578 aa17.29■□□□□ 0.36
CAPN1-219ENST00000530495 CYTH3O43739 400 aa17.29■□□□□ 0.36
CAPN1-219ENST00000530495 STAM2O75886 525 aa17.29■□□□□ 0.36
CAPN1-219ENST00000530495 TRDNQ13061 729 aa17.29■□□□□ 0.36
CAPN1-219ENST00000530495 FBXO22Q8NEZ5 403 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms