RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 NFRKBQ6P4R8 1299 aa17.78■□□□□ 0.44
CCDC90B-215ENST00000529745 USP17L6PQ6QN14 398 aa17.78■□□□□ 0.44
CCDC90B-215ENST00000529745 CCDC82Q8N4S0 544 aa17.78■□□□□ 0.44
CCDC90B-215ENST00000529745 IL17RAQ96F46 866 aa17.78■□□□□ 0.44
CCDC90B-215ENST00000529745 CDH23Q9H251 3354 aa17.77■□□□□ 0.44
CCDC90B-215ENST00000529745 hCG_1642624A0A1W2PR95 340 aa17.77■□□□□ 0.44
CCDC90B-215ENST00000529745 EIF5BO60841 1220 aaKnown RBP17.77■□□□□ 0.44
CCDC90B-215ENST00000529745 MYL3P08590 195 aa17.77■□□□□ 0.44
CCDC90B-215ENST00000529745 GNPTABQ3T906 1256 aa17.77■□□□□ 0.44
CCDC90B-215ENST00000529745 MYSM1Q5VVJ2 828 aa17.77■□□□□ 0.44
CCDC90B-215ENST00000529745 WWC2Q6AWC2 1192 aa17.77■□□□□ 0.44
CCDC90B-215ENST00000529745 PPTC7Q8NI37 304 aa17.77■□□□□ 0.44
CCDC90B-215ENST00000529745 AFG1LQ8WV93 481 aa17.77■□□□□ 0.44
CCDC90B-215ENST00000529745 FAM161BQ96MY7 647 aa17.77■□□□□ 0.44
CCDC90B-215ENST00000529745 ALDH8A1Q9H2A2 487 aaPredicted RBP17.77■□□□□ 0.44
CCDC90B-215ENST00000529745 BARHL2Q9NY43 387 aa17.77■□□□□ 0.44
CCDC90B-215ENST00000529745 ADD1P35611 737 aaKnown RBP17.76■□□□□ 0.43
CCDC90B-215ENST00000529745 ANAPC15P60006 121 aa17.76■□□□□ 0.43
CCDC90B-215ENST00000529745 PSMC6P62333 389 aa17.76■□□□□ 0.43
CCDC90B-215ENST00000529745 TOB2Q14106 344 aaPredicted RBP17.76■□□□□ 0.43
CCDC90B-215ENST00000529745 NTRK3Q16288 839 aa17.76■□□□□ 0.43
CCDC90B-215ENST00000529745 CELF3Q5SZQ8 465 aaKnown RBP17.76■□□□□ 0.43
CCDC90B-215ENST00000529745 MFSD5Q6N075 450 aa17.76■□□□□ 0.43
CCDC90B-215ENST00000529745 TYW1BQ6NUM6 668 aa17.76■□□□□ 0.43
CCDC90B-215ENST00000529745 HEATR3Q7Z4Q2 680 aa17.76■□□□□ 0.43
CCDC90B-215ENST00000529745 SESTD1Q86VW0 696 aa17.76■□□□□ 0.43
CCDC90B-215ENST00000529745 DHX37Q8IY37 1157 aaKnown RBP17.76■□□□□ 0.43
CCDC90B-215ENST00000529745 GLT8D2Q9H1C3 349 aa17.76■□□□□ 0.43
CCDC90B-215ENST00000529745 RIC8AQ9NPQ8 531 aa17.76■□□□□ 0.43
CCDC90B-215ENST00000529745 RAPGEFL1Q9UHV5 662 aa17.76■□□□□ 0.43
CCDC90B-215ENST00000529745 CYP46A1Q9Y6A2 500 aa17.76■□□□□ 0.43
CCDC90B-215ENST00000529745 V9GY48 417 aaPredicted RBP17.76■□□□□ 0.43
CCDC90B-215ENST00000529745 SPATA31C2B4DYI2 1134 aa17.75■□□□□ 0.43
CCDC90B-215ENST00000529745 STXBP3O00186 592 aa17.75■□□□□ 0.43
CCDC90B-215ENST00000529745 FIBPO43427 364 aa17.75■□□□□ 0.43
CCDC90B-215ENST00000529745 B4GALT4O60513 344 aa17.75■□□□□ 0.43
CCDC90B-215ENST00000529745 SUPT20HL2P0C7V6 817 aa17.75■□□□□ 0.43
CCDC90B-215ENST00000529745 UBA1P22314 1058 aaKnown RBP17.75■□□□□ 0.43
CCDC90B-215ENST00000529745 SP2Q02086 613 aa17.75■□□□□ 0.43
CCDC90B-215ENST00000529745 FPGSQ05932 587 aa17.75■□□□□ 0.43
CCDC90B-215ENST00000529745 SEMA3FQ13275 785 aa17.75■□□□□ 0.43
CCDC90B-215ENST00000529745 DGKDQ16760 1214 aa17.75■□□□□ 0.43
CCDC90B-215ENST00000529745 PFKFB3Q16875 520 aaPredicted RBP17.75■□□□□ 0.43
CCDC90B-215ENST00000529745 NBPF20Q3BBV1 942 aa17.75■□□□□ 0.43
CCDC90B-215ENST00000529745 KAT2BQ92831 832 aa17.75■□□□□ 0.43
CCDC90B-215ENST00000529745 GPKOWQ92917 476 aaPredicted RBP eCLIP17.75■□□□□ 0.43
CCDC90B-215ENST00000529745 SENP7Q9BQF6 1050 aa17.75■□□□□ 0.43
CCDC90B-215ENST00000529745 ESYT2A0FGR8 921 aa17.74■□□□□ 0.43
CCDC90B-215ENST00000529745 HAS3O00219 553 aa17.74■□□□□ 0.43
CCDC90B-215ENST00000529745 PRPF3O43395 683 aaKnown RBP17.74■□□□□ 0.43
CCDC90B-215ENST00000529745 PPFIA4O75335 1185 aa17.74■□□□□ 0.43
CCDC90B-215ENST00000529745 GGPS1O95749 300 aa17.74■□□□□ 0.43
CCDC90B-215ENST00000529745 F2P00734 622 aa17.74■□□□□ 0.43
CCDC90B-215ENST00000529745 IFNAR1P17181 557 aa17.74■□□□□ 0.43
CCDC90B-215ENST00000529745 PDIA3P30101 505 aaKnown RBP17.74■□□□□ 0.43
CCDC90B-215ENST00000529745 PLA2G5P39877 138 aa17.74■□□□□ 0.43
CCDC90B-215ENST00000529745 CLK2P49760 499 aaKnown RBP17.74■□□□□ 0.43
CCDC90B-215ENST00000529745 NAPAP54920 295 aa17.74■□□□□ 0.43
CCDC90B-215ENST00000529745 SYMPKQ92797 1274 aaKnown RBP17.74■□□□□ 0.43
CCDC90B-215ENST00000529745 GPRASP2Q96D09 838 aa17.74■□□□□ 0.43
CCDC90B-215ENST00000529745 ZNF274Q96GC6 653 aaPredicted RBP17.74■□□□□ 0.43
CCDC90B-215ENST00000529745 RNF26Q9BY78 433 aaPredicted RBP17.74■□□□□ 0.43
CCDC90B-215ENST00000529745 SPDYE3A6NKU9 549 aa17.73■□□□□ 0.43
CCDC90B-215ENST00000529745 FOSP01100 380 aaPredicted RBP17.73■□□□□ 0.43
CCDC90B-215ENST00000529745 SCG2P13521 617 aa17.73■□□□□ 0.43
CCDC90B-215ENST00000529745 NEDD9Q14511 834 aa17.73■□□□□ 0.43
CCDC90B-215ENST00000529745 PKN1Q16512 942 aa17.73■□□□□ 0.43
CCDC90B-215ENST00000529745 UBE2SQ16763 222 aa17.73■□□□□ 0.43
CCDC90B-215ENST00000529745 HSDL1Q3SXM5 330 aa17.73■□□□□ 0.43
CCDC90B-215ENST00000529745 MAFAQ8NHW3 353 aaPredicted RBP17.73■□□□□ 0.43
CCDC90B-215ENST00000529745 NOC4LQ9BVI4 516 aaKnown RBP17.73■□□□□ 0.43
CCDC90B-215ENST00000529745 KATNAL1Q9BW62 490 aa17.73■□□□□ 0.43
CCDC90B-215ENST00000529745 TRPV6Q9H1D0 765 aa17.73■□□□□ 0.43
CCDC90B-215ENST00000529745 EHMT1Q9H9B1 1298 aa17.73■□□□□ 0.43
CCDC90B-215ENST00000529745 PCDHA6Q9UN73 950 aa17.73■□□□□ 0.43
CCDC90B-215ENST00000529745 PCDHA8Q9Y5H6 950 aa17.73■□□□□ 0.43
CCDC90B-215ENST00000529745 UBIAD1Q9Y5Z9 338 aa17.73■□□□□ 0.43
CCDC90B-215ENST00000529745 TRIP12Q14669 1992 aaPredicted RBP17.72■□□□□ 0.43
CCDC90B-215ENST00000529745 MAFGO15525 162 aa17.72■□□□□ 0.43
CCDC90B-215ENST00000529745 EPHB4P54760 987 aa17.72■□□□□ 0.43
CCDC90B-215ENST00000529745 AP3B2Q13367 1082 aa17.72■□□□□ 0.43
CCDC90B-215ENST00000529745 PPIGQ13427 754 aaKnown RBP eCLIP17.72■□□□□ 0.43
CCDC90B-215ENST00000529745 SHHQ15465 462 aa17.72■□□□□ 0.43
CCDC90B-215ENST00000529745 C9orf50Q5SZB4 431 aa17.72■□□□□ 0.43
CCDC90B-215ENST00000529745 MCTP2Q6DN12 878 aa17.72■□□□□ 0.43
CCDC90B-215ENST00000529745 METTL7BQ6UX53 244 aa17.72■□□□□ 0.43
CCDC90B-215ENST00000529745 NLRX1Q86UT6 975 aa17.72■□□□□ 0.43
CCDC90B-215ENST00000529745 TMEM199Q8N511 208 aa17.72■□□□□ 0.43
CCDC90B-215ENST00000529745 GIMAP8Q8ND71 665 aaPredicted RBP17.72■□□□□ 0.43
CCDC90B-215ENST00000529745 CDHR1Q96JP9 859 aa17.72■□□□□ 0.43
CCDC90B-215ENST00000529745 ZMYND12Q9H0C1 365 aa17.72■□□□□ 0.43
CCDC90B-215ENST00000529745 HIPK3Q9H422 1215 aa17.72■□□□□ 0.43
CCDC90B-215ENST00000529745 NAP1L2Q9ULW6 460 aaPredicted RBP17.72■□□□□ 0.43
CCDC90B-215ENST00000529745 SCN5AQ14524 2016 aa17.71■□□□□ 0.43
CCDC90B-215ENST00000529745 SMCO2A6NFE2 343 aa17.71■□□□□ 0.43
CCDC90B-215ENST00000529745 ADCY7P51828 1080 aa17.71■□□□□ 0.43
CCDC90B-215ENST00000529745 ZFP91Q96JP5 570 aaPredicted RBP17.71■□□□□ 0.43
CCDC90B-215ENST00000529745 SPATA33Q96N06 139 aa17.71■□□□□ 0.43
CCDC90B-215ENST00000529745 PITPNM1O00562 1244 aa17.7■□□□□ 0.42
CCDC90B-215ENST00000529745 ITGB5P18084 799 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms