RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 DEFB118Q96PH6 123 aa15.95■□□□□ 0.14
USF1-209ENST00000529476 MXRA8Q9BRK3 442 aa15.95■□□□□ 0.14
USF1-209ENST00000529476 FOXP1Q9H334 677 aaPredicted RBP15.95■□□□□ 0.14
USF1-209ENST00000529476 TSHZ2Q9NRE2 1034 aa15.95■□□□□ 0.14
USF1-209ENST00000529476 MRVI1Q9Y6F6 885 aa15.95■□□□□ 0.14
USF1-209ENST00000529476 CUL9Q8IWT3 2517 aa15.95■□□□□ 0.14
USF1-209ENST00000529476 DOCK5Q9H7D0 1870 aa15.95■□□□□ 0.14
USF1-209ENST00000529476 VPS37CA5D8V6 355 aaPredicted RBP15.94■□□□□ 0.14
USF1-209ENST00000529476 FAM86B1E9PN63 330 aa15.94■□□□□ 0.14
USF1-209ENST00000529476 FAM86B2P0C5J1 330 aa15.94■□□□□ 0.14
USF1-209ENST00000529476 TXNP10599 105 aaKnown RBP15.94■□□□□ 0.14
USF1-209ENST00000529476 U2AF2P26368 475 aaKnown RBP eCLIP15.94■□□□□ 0.14
USF1-209ENST00000529476 USP11P51784 963 aa15.94■□□□□ 0.14
USF1-209ENST00000529476 SEMA3FQ13275 785 aa15.94■□□□□ 0.14
USF1-209ENST00000529476 TTLL4Q14679 1199 aa15.94■□□□□ 0.14
USF1-209ENST00000529476 GNPTABQ3T906 1256 aa15.94■□□□□ 0.14
USF1-209ENST00000529476 DUSP28Q4G0W2 176 aa15.94■□□□□ 0.14
USF1-209ENST00000529476 CEP55Q53EZ4 464 aa15.94■□□□□ 0.14
USF1-209ENST00000529476 CCDC62Q6P9F0 684 aa15.94■□□□□ 0.14
USF1-209ENST00000529476 NLRX1Q86UT6 975 aa15.94■□□□□ 0.14
USF1-209ENST00000529476 JADE2Q9NQC1 790 aa15.94■□□□□ 0.14
USF1-209ENST00000529476 IGLV3-22A0A075B6J6 115 aa15.93■□□□□ 0.14
USF1-209ENST00000529476 SPATA31C2B4DYI2 1134 aa15.93■□□□□ 0.14
USF1-209ENST00000529476 MEIS1O00470 390 aa15.93■□□□□ 0.14
USF1-209ENST00000529476 MSCO60682 206 aa15.93■□□□□ 0.14
USF1-209ENST00000529476 TDP2O95551 362 aa15.93■□□□□ 0.14
USF1-209ENST00000529476 GJB1P08034 283 aa15.93■□□□□ 0.14
USF1-209ENST00000529476 RARBP10826 455 aa15.93■□□□□ 0.14
USF1-209ENST00000529476 ICAM3P32942 547 aa15.93■□□□□ 0.14
USF1-209ENST00000529476 CIITAP33076 1130 aa15.93■□□□□ 0.14
USF1-209ENST00000529476 ANP32AP39687 249 aaKnown RBP15.93■□□□□ 0.14
USF1-209ENST00000529476 SP2Q02086 613 aa15.93■□□□□ 0.14
USF1-209ENST00000529476 MTMR1Q13613 665 aa15.93■□□□□ 0.14
USF1-209ENST00000529476 LY6KQ17RY6 165 aa15.93■□□□□ 0.14
USF1-209ENST00000529476 LETM2Q2VYF4 491 aa15.93■□□□□ 0.14
USF1-209ENST00000529476 NEK8Q86SG6 692 aa15.93■□□□□ 0.14
USF1-209ENST00000529476 NOSTRINQ8IVI9 506 aa15.93■□□□□ 0.14
USF1-209ENST00000529476 COPS5Q92905 334 aa15.93■□□□□ 0.14
USF1-209ENST00000529476 GPRASP2Q96D09 838 aa15.93■□□□□ 0.14
USF1-209ENST00000529476 DDX41Q9UJV9 622 aaKnown RBP15.93■□□□□ 0.14
USF1-209ENST00000529476 GNEQ9Y223 722 aaKnown RBP15.93■□□□□ 0.14
USF1-209ENST00000529476 FIBPO43427 364 aa15.92■□□□□ 0.14
USF1-209ENST00000529476 SORBS3O60504 671 aa15.92■□□□□ 0.14
USF1-209ENST00000529476 DUSP11O75319 330 aaKnown RBP15.92■□□□□ 0.14
USF1-209ENST00000529476 ARP10275 920 aa15.92■□□□□ 0.14
USF1-209ENST00000529476 PRR16Q569H4 304 aa15.92■□□□□ 0.14
USF1-209ENST00000529476 KCNV1Q6PIU1 500 aa15.92■□□□□ 0.14
USF1-209ENST00000529476 NIPA1Q7RTP0 329 aa15.92■□□□□ 0.14
USF1-209ENST00000529476 PLA2G4DQ86XP0 818 aa15.92■□□□□ 0.14
USF1-209ENST00000529476 U2AF1L4Q8WU68 220 aaKnown RBP15.92■□□□□ 0.14
USF1-209ENST00000529476 XPNPEP3Q9NQH7 507 aa15.92■□□□□ 0.14
USF1-209ENST00000529476 KCNH7Q9NS40 1196 aa15.92■□□□□ 0.14
USF1-209ENST00000529476 PKD2L1Q9P0L9 805 aa15.92■□□□□ 0.14
USF1-209ENST00000529476 SYNRGQ9UMZ2 1314 aa15.92■□□□□ 0.14
USF1-209ENST00000529476 CYP3A7-CYP3A51PA0A087WV96 503 aa15.91■□□□□ 0.14
USF1-209ENST00000529476 WNT7AO00755 349 aa15.91■□□□□ 0.14
USF1-209ENST00000529476 DYNC1LI2O43237 492 aaPredicted RBP15.91■□□□□ 0.14
USF1-209ENST00000529476 STX6O43752 255 aa15.91■□□□□ 0.14
USF1-209ENST00000529476 ATP9AO75110 1047 aa15.91■□□□□ 0.14
USF1-209ENST00000529476 SGPL1O95470 568 aa15.91■□□□□ 0.14
USF1-209ENST00000529476 PGK1P00558 417 aa15.91■□□□□ 0.14
USF1-209ENST00000529476 ATP2B1P20020 1258 aa15.91■□□□□ 0.14
USF1-209ENST00000529476 UBA1P22314 1058 aaKnown RBP15.91■□□□□ 0.14
USF1-209ENST00000529476 CYP3A7P24462 503 aa15.91■□□□□ 0.14
USF1-209ENST00000529476 IRX5P78411 483 aaPredicted RBP15.91■□□□□ 0.14
USF1-209ENST00000529476 TLK2Q86UE8 772 aa15.91■□□□□ 0.14
USF1-209ENST00000529476 FERMT3Q86UX7 667 aa15.91■□□□□ 0.14
USF1-209ENST00000529476 LENG9Q96B70 501 aa15.91■□□□□ 0.14
USF1-209ENST00000529476 UIMC1Q96RL1 719 aa15.91■□□□□ 0.14
USF1-209ENST00000529476 CRISPLD2Q9H0B8 497 aa15.91■□□□□ 0.14
USF1-209ENST00000529476 BCAS3Q9H6U6 928 aa15.91■□□□□ 0.14
USF1-209ENST00000529476 MTMR6Q9Y217 621 aa15.91■□□□□ 0.14
USF1-209ENST00000529476 RBM19Q9Y4C8 960 aaKnown RBP15.91■□□□□ 0.14
USF1-209ENST00000529476 MYADML2A6NDP7 307 aa15.9■□□□□ 0.14
USF1-209ENST00000529476 NKRFO15226 690 aaKnown RBP eCLIP15.9■□□□□ 0.14
USF1-209ENST00000529476 SLC37A4O43826 429 aa15.9■□□□□ 0.14
USF1-209ENST00000529476 CCNT1O60563 726 aaKnown RBP15.9■□□□□ 0.14
USF1-209ENST00000529476 GGPS1O95749 300 aa15.9■□□□□ 0.14
USF1-209ENST00000529476 TFRCP02786 760 aaKnown RBP15.9■□□□□ 0.14
USF1-209ENST00000529476 MYCNP04198 464 aaPredicted RBP15.9■□□□□ 0.14
USF1-209ENST00000529476 TGFB3P10600 412 aa15.9■□□□□ 0.14
USF1-209ENST00000529476 KCNA2P16389 499 aa15.9■□□□□ 0.14
USF1-209ENST00000529476 GJA8P48165 433 aa15.9■□□□□ 0.14
USF1-209ENST00000529476 MOXD1Q6UVY6 613 aa15.9■□□□□ 0.14
USF1-209ENST00000529476 OR6J1Q8NGC5 347 aa15.9■□□□□ 0.14
USF1-209ENST00000529476 CDHR1Q96JP9 859 aa15.9■□□□□ 0.14
USF1-209ENST00000529476 MBOAT7Q96N66 472 aa15.9■□□□□ 0.14
USF1-209ENST00000529476 HTATIP2Q9BUP3 242 aa15.9■□□□□ 0.14
USF1-209ENST00000529476 UPF3AQ9H1J1 476 aaKnown RBP15.9■□□□□ 0.14
USF1-209ENST00000529476 AGO4Q9HCK5 861 aaKnown RBP15.9■□□□□ 0.14
USF1-209ENST00000529476 DDX25Q9UHL0 483 aaKnown RBP15.9■□□□□ 0.14
USF1-209ENST00000529476 OGDHLQ9ULD0 1010 aa15.9■□□□□ 0.14
USF1-209ENST00000529476 Q9Y3F1 56 aa15.9■□□□□ 0.14
USF1-209ENST00000529476 CTAGE5O15320 804 aa15.89■□□□□ 0.13
USF1-209ENST00000529476 MAFGO15525 162 aa15.89■□□□□ 0.13
USF1-209ENST00000529476 ADAMTS4O75173 837 aa15.89■□□□□ 0.13
USF1-209ENST00000529476 GH1P01241 217 aa15.89■□□□□ 0.13
USF1-209ENST00000529476 C6orf222P0C671 652 aaPredicted RBP15.89■□□□□ 0.13
USF1-209ENST00000529476 GCFC2P16383 781 aaKnown RBP15.89■□□□□ 0.13
USF1-209ENST00000529476 GJA9P57773 515 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms