RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 RARBP10826 455 aa12.97□□□□□ -0.33
CHD7-209ENST00000529472 SMPD1P17405 629 aa12.97□□□□□ -0.33
CHD7-209ENST00000529472 SEMA3FQ13275 785 aa12.97□□□□□ -0.33
CHD7-209ENST00000529472 LY6KQ17RY6 165 aa12.97□□□□□ -0.33
CHD7-209ENST00000529472 FOXD4L5Q5VV16 416 aaPredicted RBP12.97□□□□□ -0.33
CHD7-209ENST00000529472 IQSEC1Q6DN90 963 aa12.97□□□□□ -0.33
CHD7-209ENST00000529472 FOXD4L4Q8WXT5 416 aaPredicted RBP12.97□□□□□ -0.33
CHD7-209ENST00000529472 GPRASP2Q96D09 838 aa12.97□□□□□ -0.33
CHD7-209ENST00000529472 DOCK5Q9H7D0 1870 aa12.97□□□□□ -0.33
CHD7-209ENST00000529472 IGLV3-22A0A075B6J6 115 aa12.96□□□□□ -0.33
CHD7-209ENST00000529472 SPATA31C2B4DYI2 1134 aa12.96□□□□□ -0.33
CHD7-209ENST00000529472 MEIS1O00470 390 aa12.96□□□□□ -0.33
CHD7-209ENST00000529472 WNT7AO00755 349 aa12.96□□□□□ -0.33
CHD7-209ENST00000529472 MSCO60682 206 aa12.96□□□□□ -0.33
CHD7-209ENST00000529472 MYCNP04198 464 aaPredicted RBP12.96□□□□□ -0.33
CHD7-209ENST00000529472 ARP10275 920 aa12.96□□□□□ -0.33
CHD7-209ENST00000529472 UBA1P22314 1058 aaKnown RBP12.96□□□□□ -0.33
CHD7-209ENST00000529472 CIITAP33076 1130 aa12.96□□□□□ -0.33
CHD7-209ENST00000529472 SETQ01105 290 aaPredicted RBP12.96□□□□□ -0.33
CHD7-209ENST00000529472 PKP1Q13835 747 aa12.96□□□□□ -0.33
CHD7-209ENST00000529472 DUSP28Q4G0W2 176 aa12.96□□□□□ -0.33
CHD7-209ENST00000529472 CCDC62Q6P9F0 684 aa12.96□□□□□ -0.33
CHD7-209ENST00000529472 TLK2Q86UE8 772 aa12.96□□□□□ -0.33
CHD7-209ENST00000529472 PLA2G4DQ86XP0 818 aa12.96□□□□□ -0.33
CHD7-209ENST00000529472 COPS5Q92905 334 aa12.96□□□□□ -0.33
CHD7-209ENST00000529472 LENG9Q96B70 501 aa12.96□□□□□ -0.33
CHD7-209ENST00000529472 ABHD8Q96I13 439 aa12.96□□□□□ -0.33
CHD7-209ENST00000529472 CDHR1Q96JP9 859 aa12.96□□□□□ -0.33
CHD7-209ENST00000529472 TMEM106CQ9BVX2 250 aa12.96□□□□□ -0.33
CHD7-209ENST00000529472 XPNPEP3Q9NQH7 507 aa12.96□□□□□ -0.33
CHD7-209ENST00000529472 KCNH7Q9NS40 1196 aa12.96□□□□□ -0.33
CHD7-209ENST00000529472 DDX25Q9UHL0 483 aaKnown RBP12.96□□□□□ -0.33
CHD7-209ENST00000529472 DDX41Q9UJV9 622 aaKnown RBP12.96□□□□□ -0.33
CHD7-209ENST00000529472 NOL7Q9UMY1 257 aaKnown RBP12.96□□□□□ -0.33
CHD7-209ENST00000529472 SYNRGQ9UMZ2 1314 aa12.95□□□□□ -0.34
CHD7-209ENST00000529472 CYP3A7-CYP3A51PA0A087WV96 503 aa12.95□□□□□ -0.34
CHD7-209ENST00000529472 DYNC1LI2O43237 492 aaPredicted RBP12.95□□□□□ -0.34
CHD7-209ENST00000529472 SLC37A4O43826 429 aa12.95□□□□□ -0.34
CHD7-209ENST00000529472 DUSP11O75319 330 aaKnown RBP12.95□□□□□ -0.34
CHD7-209ENST00000529472 GGPS1O95749 300 aa12.95□□□□□ -0.34
CHD7-209ENST00000529472 PGK1P00558 417 aa12.95□□□□□ -0.34
CHD7-209ENST00000529472 CYP3A7P24462 503 aa12.95□□□□□ -0.34
CHD7-209ENST00000529472 ICAM3P32942 547 aa12.95□□□□□ -0.34
CHD7-209ENST00000529472 SP2Q02086 613 aa12.95□□□□□ -0.34
CHD7-209ENST00000529472 RESTQ13127 1097 aa12.95□□□□□ -0.34
CHD7-209ENST00000529472 NBR1Q14596 966 aa12.95□□□□□ -0.34
CHD7-209ENST00000529472 LHX8Q68G74 356 aa12.95□□□□□ -0.34
CHD7-209ENST00000529472 KCNV1Q6PIU1 500 aa12.95□□□□□ -0.34
CHD7-209ENST00000529472 NIPA1Q7RTP0 329 aa12.95□□□□□ -0.34
CHD7-209ENST00000529472 OR6J1Q8NGC5 347 aa12.95□□□□□ -0.34
CHD7-209ENST00000529472 NAP1L4Q99733 375 aaKnown RBP12.95□□□□□ -0.34
CHD7-209ENST00000529472 AGO4Q9HCK5 861 aaKnown RBP12.95□□□□□ -0.34
CHD7-209ENST00000529472 GNEQ9Y223 722 aaKnown RBP12.95□□□□□ -0.34
CHD7-209ENST00000529472 NKRFO15226 690 aaKnown RBP eCLIP12.94□□□□□ -0.34
CHD7-209ENST00000529472 ATP9AO75110 1047 aa12.94□□□□□ -0.34
CHD7-209ENST00000529472 GJB1P08034 283 aa12.94□□□□□ -0.34
CHD7-209ENST00000529472 C6orf222P0C671 652 aaPredicted RBP12.94□□□□□ -0.34
CHD7-209ENST00000529472 ZSCAN22P10073 491 aaPredicted RBP12.94□□□□□ -0.34
CHD7-209ENST00000529472 TGFB3P10600 412 aa12.94□□□□□ -0.34
CHD7-209ENST00000529472 GCFC2P16383 781 aaKnown RBP12.94□□□□□ -0.34
CHD7-209ENST00000529472 KCNA2P16389 499 aa12.94□□□□□ -0.34
CHD7-209ENST00000529472 MCM7P33993 719 aa12.94□□□□□ -0.34
CHD7-209ENST00000529472 TRAPPC10P48553 1259 aa12.94□□□□□ -0.34
CHD7-209ENST00000529472 IRX5P78411 483 aaPredicted RBP12.94□□□□□ -0.34
CHD7-209ENST00000529472 SP4Q02446 784 aa12.94□□□□□ -0.34
CHD7-209ENST00000529472 ARHGAP1Q07960 439 aa12.94□□□□□ -0.34
CHD7-209ENST00000529472 Q4G0T1 1027 aa12.94□□□□□ -0.34
CHD7-209ENST00000529472 TTC38Q5R3I4 469 aa12.94□□□□□ -0.34
CHD7-209ENST00000529472 PPP4R3AQ6IN85 833 aa12.94□□□□□ -0.34
CHD7-209ENST00000529472 MOXD1Q6UVY6 613 aa12.94□□□□□ -0.34
CHD7-209ENST00000529472 CYFIP1Q7L576 1253 aa12.94□□□□□ -0.34
CHD7-209ENST00000529472 BRAPQ7Z569 592 aa12.94□□□□□ -0.34
CHD7-209ENST00000529472 DHX37Q8IY37 1157 aaKnown RBP12.94□□□□□ -0.34
CHD7-209ENST00000529472 U2AF1L4Q8WU68 220 aaKnown RBP12.94□□□□□ -0.34
CHD7-209ENST00000529472 GJA10Q969M2 543 aa12.94□□□□□ -0.34
CHD7-209ENST00000529472 MBOAT7Q96N66 472 aa12.94□□□□□ -0.34
CHD7-209ENST00000529472 ZNF577Q9BSK1 485 aa12.94□□□□□ -0.34
CHD7-209ENST00000529472 AP5M1Q9H0R1 490 aa12.94□□□□□ -0.34
CHD7-209ENST00000529472 BCAS3Q9H6U6 928 aa12.94□□□□□ -0.34
CHD7-209ENST00000529472 KIAA0100Q14667 2235 aaKnown RBP12.94□□□□□ -0.34
CHD7-209ENST00000529472 MYADML2A6NDP7 307 aa12.93□□□□□ -0.34
CHD7-209ENST00000529472 CCDC85CA6NKD9 419 aa12.93□□□□□ -0.34
CHD7-209ENST00000529472 DDX39AO00148 427 aaKnown RBP12.93□□□□□ -0.34
CHD7-209ENST00000529472 IPO5O00410 1097 aaKnown RBP12.93□□□□□ -0.34
CHD7-209ENST00000529472 MSH4O15457 936 aa12.93□□□□□ -0.34
CHD7-209ENST00000529472 NEMFO60524 1076 aa12.93□□□□□ -0.34
CHD7-209ENST00000529472 GH1P01241 217 aa12.93□□□□□ -0.34
CHD7-209ENST00000529472 TFRCP02786 760 aaKnown RBP12.93□□□□□ -0.34
CHD7-209ENST00000529472 TOB1P50616 345 aaPredicted RBP12.93□□□□□ -0.34
CHD7-209ENST00000529472 ITGB3BPQ13352 177 aaPredicted RBP12.93□□□□□ -0.34
CHD7-209ENST00000529472 NEDD9Q14511 834 aa12.93□□□□□ -0.34
CHD7-209ENST00000529472 ZNF174Q15697 407 aa12.93□□□□□ -0.34
CHD7-209ENST00000529472 CELF3Q5SZQ8 465 aaKnown RBP12.93□□□□□ -0.34
CHD7-209ENST00000529472 SPATA33Q96N06 139 aa12.93□□□□□ -0.34
CHD7-209ENST00000529472 SENP7Q9BQF6 1050 aa12.93□□□□□ -0.34
CHD7-209ENST00000529472 SDF4Q9BRK5 362 aa12.93□□□□□ -0.34
CHD7-209ENST00000529472 MLXIPQ9HAP2 919 aa12.93□□□□□ -0.34
CHD7-209ENST00000529472 SPC25Q9HBM1 224 aa12.93□□□□□ -0.34
CHD7-209ENST00000529472 MYH15Q9Y2K3 1946 aa12.92□□□□□ -0.34
CHD7-209ENST00000529472 POTEFA5A3E0 1075 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms