RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 STK11IPQ8N1F8 1099 aa10.04□□□□□ -0.8
SSBP3-212ENST00000528930 SLC43A3Q8NBI5 491 aa10.04□□□□□ -0.8
SSBP3-212ENST00000528930 RILPL2Q969X0 211 aa10.04□□□□□ -0.8
SSBP3-212ENST00000528930 AGBL1Q96MI9 1066 aa10.04□□□□□ -0.8
SSBP3-212ENST00000528930 SH2B1Q9NRF2 756 aaPredicted RBP10.04□□□□□ -0.8
SSBP3-212ENST00000528930 SLC5A4Q9NY91 659 aa10.04□□□□□ -0.8
SSBP3-212ENST00000528930 TMX2Q9Y320 296 aa10.04□□□□□ -0.8
SSBP3-212ENST00000528930 ASH1LQ9NR48 2969 aaKnown RBP10.04□□□□□ -0.8
SSBP3-212ENST00000528930 WDR87Q6ZQQ6 2873 aa10.04□□□□□ -0.8
SSBP3-212ENST00000528930 IGKV6D-41A0A0C4DH26 115 aa10.03□□□□□ -0.8
SSBP3-212ENST00000528930 KIF28PB7ZC32 967 aa10.03□□□□□ -0.8
SSBP3-212ENST00000528930 ASGR1P07306 291 aa10.03□□□□□ -0.8
SSBP3-212ENST00000528930 EEF2P13639 858 aaKnown RBP10.03□□□□□ -0.8
SSBP3-212ENST00000528930 TAL1P17542 331 aaPredicted RBP10.03□□□□□ -0.8
SSBP3-212ENST00000528930 SDSP20132 328 aa10.03□□□□□ -0.8
SSBP3-212ENST00000528930 ICA1Q05084 483 aa10.03□□□□□ -0.8
SSBP3-212ENST00000528930 NMIQ13287 307 aaPredicted RBP10.03□□□□□ -0.8
SSBP3-212ENST00000528930 MCMDC2Q4G0Z9 681 aa10.03□□□□□ -0.8
SSBP3-212ENST00000528930 ZNF589Q86UQ0 364 aaPredicted RBP10.03□□□□□ -0.8
SSBP3-212ENST00000528930 ABRAQ8N0Z2 381 aa10.03□□□□□ -0.8
SSBP3-212ENST00000528930 SHCBP1Q8NEM2 672 aa10.03□□□□□ -0.8
SSBP3-212ENST00000528930 NACAP1Q9BZK3 213 aa10.03□□□□□ -0.8
SSBP3-212ENST00000528930 NAPBQ9H115 298 aa10.03□□□□□ -0.8
SSBP3-212ENST00000528930 RPAP3Q9H6T3 665 aaPredicted RBP10.03□□□□□ -0.8
SSBP3-212ENST00000528930 KANSL2Q9H9L4 492 aa10.03□□□□□ -0.8
SSBP3-212ENST00000528930 MKNK2Q9HBH9 465 aa10.03□□□□□ -0.8
SSBP3-212ENST00000528930 TRIP12Q14669 1992 aaPredicted RBP10.03□□□□□ -0.8
SSBP3-212ENST00000528930 MBTPS2O43462 519 aa10.02□□□□□ -0.81
SSBP3-212ENST00000528930 PRDM1O75626 825 aa10.02□□□□□ -0.81
SSBP3-212ENST00000528930 LTBRP36941 435 aa10.02□□□□□ -0.81
SSBP3-212ENST00000528930 PPARAQ07869 468 aa10.02□□□□□ -0.81
SSBP3-212ENST00000528930 ALX1Q15699 326 aa10.02□□□□□ -0.81
SSBP3-212ENST00000528930 PCSK9Q8NBP7 692 aaKnown RBP10.02□□□□□ -0.81
SSBP3-212ENST00000528930 MRPL38Q96DV4 380 aaKnown RBP10.02□□□□□ -0.81
SSBP3-212ENST00000528930 SCLYQ96I15 445 aa10.02□□□□□ -0.81
SSBP3-212ENST00000528930 MOV10L1Q9BXT6 1211 aaKnown RBP10.02□□□□□ -0.81
SSBP3-212ENST00000528930 VCPKMTQ9H867 229 aa10.02□□□□□ -0.81
SSBP3-212ENST00000528930 ARHGEF10LQ9HCE6 1279 aa10.02□□□□□ -0.81
SSBP3-212ENST00000528930 GMPR2Q9P2T1 348 aaKnown RBP10.02□□□□□ -0.81
SSBP3-212ENST00000528930 MICAL3Q7RTP6 2002 aa10.02□□□□□ -0.81
SSBP3-212ENST00000528930 FGAP02671 866 aa10.01□□□□□ -0.81
SSBP3-212ENST00000528930 FGRP09769 529 aa10.01□□□□□ -0.81
SSBP3-212ENST00000528930 HSPD1P10809 573 aaKnown RBP10.01□□□□□ -0.81
SSBP3-212ENST00000528930 GSPT1P15170 499 aaKnown RBP10.01□□□□□ -0.81
SSBP3-212ENST00000528930 CTDSPL2Q05D32 466 aa10.01□□□□□ -0.81
SSBP3-212ENST00000528930 CBX2Q14781 532 aaPredicted RBP10.01□□□□□ -0.81
SSBP3-212ENST00000528930 TIGD5Q53EQ6 642 aa10.01□□□□□ -0.81
SSBP3-212ENST00000528930 KIAA2013Q8IYS2 634 aa10.01□□□□□ -0.81
SSBP3-212ENST00000528930 ZNF444Q8N0Y2 327 aaPredicted RBP10.01□□□□□ -0.81
SSBP3-212ENST00000528930 SPICE1Q8N0Z3 855 aa10.01□□□□□ -0.81
SSBP3-212ENST00000528930 MKL1Q969V6 931 aa10.01□□□□□ -0.81
SSBP3-212ENST00000528930 TGS1Q96RS0 853 aaKnown RBP10.01□□□□□ -0.81
SSBP3-212ENST00000528930 TINF2Q9BSI4 451 aa10.01□□□□□ -0.81
SSBP3-212ENST00000528930 UPF3AQ9H1J1 476 aaKnown RBP10.01□□□□□ -0.81
SSBP3-212ENST00000528930 INCENPQ9NQS7 918 aa10.01□□□□□ -0.81
SSBP3-212ENST00000528930 NYAP2Q9P242 653 aa10.01□□□□□ -0.81
SSBP3-212ENST00000528930 ANAPC4Q9UJX5 808 aa10.01□□□□□ -0.81
SSBP3-212ENST00000528930 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.01□□□□□ -0.81
SSBP3-212ENST00000528930 FCF1Q9Y324 198 aaKnown RBP10.01□□□□□ -0.81
SSBP3-212ENST00000528930 NAV2Q8IVL1 2488 aa10□□□□□ -0.81
SSBP3-212ENST00000528930 LOC730098B7Z3J9 87 aa10□□□□□ -0.81
SSBP3-212ENST00000528930 STXBP3O00186 592 aa10□□□□□ -0.81
SSBP3-212ENST00000528930 WDR46O15213 610 aaKnown RBP10□□□□□ -0.81
SSBP3-212ENST00000528930 DUSP11O75319 330 aaKnown RBP10□□□□□ -0.81
SSBP3-212ENST00000528930 ACTN1P12814 892 aa10□□□□□ -0.81
SSBP3-212ENST00000528930 PDE4BQ07343 736 aa10□□□□□ -0.81
SSBP3-212ENST00000528930 COG2Q14746 738 aa10□□□□□ -0.81
SSBP3-212ENST00000528930 TTC22Q5TAA0 569 aa10□□□□□ -0.81
SSBP3-212ENST00000528930 NEDD1Q8NHV4 660 aa10□□□□□ -0.81
SSBP3-212ENST00000528930 SH2D4AQ9H788 454 aa10□□□□□ -0.81
SSBP3-212ENST00000528930 ZNF287Q9HBT7 754 aa10□□□□□ -0.81
SSBP3-212ENST00000528930 HOXC10Q9NYD6 342 aa10□□□□□ -0.81
SSBP3-212ENST00000528930 GCN1Q92616 2671 aaKnown RBP10□□□□□ -0.81
SSBP3-212ENST00000528930 ZMYM6O95789 1325 aa10□□□□□ -0.81
SSBP3-212ENST00000528930 CCDC171Q6TFL3 1326 aa10□□□□□ -0.81
SSBP3-212ENST00000528930 PLIN4Q96Q06 1357 aa10□□□□□ -0.81
SSBP3-212ENST00000528930 SOBPA7XYQ1 873 aa9.99□□□□□ -0.81
SSBP3-212ENST00000528930 PDGFBP01127 241 aaPredicted RBP9.99□□□□□ -0.81
SSBP3-212ENST00000528930 SLC3A2P08195 630 aaKnown RBP9.99□□□□□ -0.81
SSBP3-212ENST00000528930 ERCC3P19447 782 aa9.99□□□□□ -0.81
SSBP3-212ENST00000528930 NKX3-2P78367 333 aa9.99□□□□□ -0.81
SSBP3-212ENST00000528930 TFAP4Q01664 338 aa9.99□□□□□ -0.81
SSBP3-212ENST00000528930 SMAD4Q13485 552 aaKnown RBP9.99□□□□□ -0.81
SSBP3-212ENST00000528930 CTC1Q2NKJ3 1217 aa9.99□□□□□ -0.81
SSBP3-212ENST00000528930 CWC27Q6UX04 472 aaKnown RBP9.99□□□□□ -0.81
SSBP3-212ENST00000528930 TMEM105Q8N8V8 129 aa9.99□□□□□ -0.81
SSBP3-212ENST00000528930 NLRP7Q8WX94 980 aa9.99□□□□□ -0.81
SSBP3-212ENST00000528930 CEP95Q96GE4 821 aa9.99□□□□□ -0.81
SSBP3-212ENST00000528930 TANGO6Q9C0B7 1094 aa9.99□□□□□ -0.81
SSBP3-212ENST00000528930 TOR4AQ9NXH8 423 aa9.99□□□□□ -0.81
SSBP3-212ENST00000528930 MTMR4Q9NYA4 1195 aa9.99□□□□□ -0.81
SSBP3-212ENST00000528930 CLIP2Q9UDT6 1046 aa9.99□□□□□ -0.81
SSBP3-212ENST00000528930 MTUS1Q9ULD2 1270 aa9.99□□□□□ -0.81
SSBP3-212ENST00000528930 ADAMTS5Q9UNA0 930 aa9.99□□□□□ -0.81
SSBP3-212ENST00000528930 ASPMQ8IZT6 3477 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 MYH4Q9Y623 1939 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 LINC01553A4QN01 128 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 F5H6K3 240 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 HIP1O00291 1037 aa9.98□□□□□ -0.81
SSBP3-212ENST00000528930 CTAGE5O15320 804 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms