RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 LRRC53A6NM62 1247 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 AKR1B10O60218 316 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 PPP1R11O60927 126 aaPredicted RBP9.27□□□□□ -0.93
CSTF3-208ENST00000528865 MOCS3O95396 460 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 USP11P51784 963 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 IRX5P78411 483 aaPredicted RBP9.27□□□□□ -0.93
CSTF3-208ENST00000528865 COASYQ13057 564 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 CCDC96Q2M329 555 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 GPATCH4Q5T3I0 446 aaKnown RBP9.27□□□□□ -0.93
CSTF3-208ENST00000528865 KLHDC7AQ5VTJ3 777 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 LEKR1Q6ZMV7 388 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 FAM196AQ6ZSG2 479 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 RRAGAQ7L523 313 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 DYMQ7RTS9 669 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 TRIM59Q8IWR1 403 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 ADGRF4Q8IZF3 695 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 SPATA4Q8NEY3 305 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 CAGE1Q8TC20 777 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 MKL1Q969V6 931 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 CCDC102AQ96A19 550 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 CAPZA3Q96KX2 299 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 OSBPL9Q96SU4 736 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 TLR10Q9BXR5 811 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 COA1Q9GZY4 146 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 NT5C3AQ9H0P0 336 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 MLXIPQ9HAP2 919 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 BMP2KQ9NSY1 1161 aaPredicted RBP9.27□□□□□ -0.93
CSTF3-208ENST00000528865 PANK4Q9NVE7 773 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 AIPL1Q9NZN9 384 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 DDX25Q9UHL0 483 aaKnown RBP9.27□□□□□ -0.93
CSTF3-208ENST00000528865 COL4A3BPQ9Y5P4 624 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 CAPN6Q9Y6Q1 641 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 FRMPD2Q68DX3 1309 aaPredicted RBP9.27□□□□□ -0.93
CSTF3-208ENST00000528865 KDM3AQ9Y4C1 1321 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 LY75O60449 1722 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 POTEMA6NI47 508 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 BTNL10A8MVZ5 291 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 ZBTB5O15062 677 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 TLR2O60603 784 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 SHOX2O60902 331 aaPredicted RBP9.26□□□□□ -0.93
CSTF3-208ENST00000528865 RNF40O75150 1001 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 SERPINB2P05120 415 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 SERPING1P05155 500 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 MYBL2P10244 700 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 EPB41P11171 864 aaKnown RBP9.26□□□□□ -0.93
CSTF3-208ENST00000528865 CAPN2P17655 700 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 SHMT1P34896 483 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 C2orf54Q08AI8 447 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 RAD51AP2Q09MP3 1159 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 NNTQ13423 1086 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 SLC9C1Q4G0N8 1177 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 FAM26FQ5R3K3 315 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 SFMBT2Q5VUG0 894 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 ALS2CLQ60I27 953 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 MCTP2Q6DN12 878 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 DPY19L2P1Q6NXN4 242 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 EMBQ6PCB8 327 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 LRRC31Q6UY01 552 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 DPP8Q6V1X1 898 aaPredicted RBP9.26□□□□□ -0.93
CSTF3-208ENST00000528865 CCDC65Q8IXS2 484 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 AFAP1L1Q8TED9 768 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 SMCR8Q8TEV9 937 aaPredicted RBP9.26□□□□□ -0.93
CSTF3-208ENST00000528865 CUL5Q93034 780 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 CAVIN3Q969G5 261 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 EEF2KMTQ96G04 330 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 NOX5Q96PH1 765 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 ALS2CR12Q96Q35 445 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 SH3GL2Q99962 352 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 LRRC1Q9BTT6 524 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 SELENOOQ9BVL4 669 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 MRIQ9BWK5 157 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 KCTD10Q9H3F6 313 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 KCNMB3Q9NPA1 279 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 GPCPD1Q9NPB8 672 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 JADE2Q9NQC1 790 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 FAM207AQ9NSI2 230 aaPredicted RBP9.26□□□□□ -0.93
CSTF3-208ENST00000528865 SALL4Q9UJQ4 1053 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 PITPNM2Q9BZ72 1349 aa9.26□□□□□ -0.93
CSTF3-208ENST00000528865 GRID2IPA4D2P6 1211 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 CES2O00748 559 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 PLA2G4BP0C869 781 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 GYS1P13807 737 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 GGCXP38435 758 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 PAFAH1B1P43034 410 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 MMP14P50281 582 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 LRRC41Q15345 812 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 NAB2Q15742 525 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 EDRF1Q3B7T1 1238 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 FAM83BQ5T0W9 1011 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 C10orf76Q5T2E6 689 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 HAUS3Q68CZ6 603 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 TTBK2Q6IQ55 1244 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 HHIPL2Q6UWX4 724 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 LRRC47Q8N1G4 583 aaKnown RBP9.25□□□□□ -0.93
CSTF3-208ENST00000528865 KCTD17Q8N5Z5 321 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 GOLGA6L1Q8N7Z2 621 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 CRYGNQ8WXF5 182 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 NGLY1Q96IV0 654 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 CCDC17Q96LX7 622 aa9.25□□□□□ -0.93
CSTF3-208ENST00000528865 EHD4Q9H223 541 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms