RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 TRIB2Q92519 343 aa13.79□□□□□ -0.2
TRAF3IP2-211ENST00000528599 UIMC1Q96RL1 719 aa13.79□□□□□ -0.2
TRAF3IP2-211ENST00000528599 KATNBL1Q9H079 304 aa13.79□□□□□ -0.2
TRAF3IP2-211ENST00000528599 SYNGAP1Q96PV0 1343 aa13.79□□□□□ -0.2
TRAF3IP2-211ENST00000528599 BAG4O95429 457 aaKnown RBP13.78□□□□□ -0.2
TRAF3IP2-211ENST00000528599 ELNP15502 786 aa13.78□□□□□ -0.2
TRAF3IP2-211ENST00000528599 KRT85P78386 507 aa13.78□□□□□ -0.2
TRAF3IP2-211ENST00000528599 ORC2Q13416 577 aaPredicted RBP13.78□□□□□ -0.2
TRAF3IP2-211ENST00000528599 SEPT14Q6ZU15 432 aa13.78□□□□□ -0.2
TRAF3IP2-211ENST00000528599 FBXO16Q8IX29 292 aaPredicted RBP13.78□□□□□ -0.2
TRAF3IP2-211ENST00000528599 LINC00301Q8NCQ3 95 aa13.78□□□□□ -0.2
TRAF3IP2-211ENST00000528599 GJA10Q969M2 543 aa13.78□□□□□ -0.2
TRAF3IP2-211ENST00000528599 KCNH7Q9NS40 1196 aa13.78□□□□□ -0.2
TRAF3IP2-211ENST00000528599 CFAP45Q9UL16 551 aa13.78□□□□□ -0.2
TRAF3IP2-211ENST00000528599 DNAH12Q6ZR08 3092 aa13.77□□□□□ -0.21
TRAF3IP2-211ENST00000528599 MSH4O15457 936 aa13.77□□□□□ -0.21
TRAF3IP2-211ENST00000528599 ATP2C1P98194 919 aaPredicted RBP13.77□□□□□ -0.21
TRAF3IP2-211ENST00000528599 MTMR1Q13613 665 aa13.77□□□□□ -0.21
TRAF3IP2-211ENST00000528599 SLC39A14Q15043 492 aa13.77□□□□□ -0.21
TRAF3IP2-211ENST00000528599 PRAMEF19Q5SWL8 479 aa13.77□□□□□ -0.21
TRAF3IP2-211ENST00000528599 TAPT1Q6NXT6 567 aa13.77□□□□□ -0.21
TRAF3IP2-211ENST00000528599 CLEC17AQ6ZS10 378 aa13.77□□□□□ -0.21
TRAF3IP2-211ENST00000528599 NLRX1Q86UT6 975 aa13.77□□□□□ -0.21
TRAF3IP2-211ENST00000528599 ETNPPLQ8TBG4 499 aa13.77□□□□□ -0.21
TRAF3IP2-211ENST00000528599 LEO1Q8WVC0 666 aaPredicted RBP13.77□□□□□ -0.21
TRAF3IP2-211ENST00000528599 HAS1Q92839 578 aa13.77□□□□□ -0.21
TRAF3IP2-211ENST00000528599 GPRASP2Q96D09 838 aa13.77□□□□□ -0.21
TRAF3IP2-211ENST00000528599 MTMR9Q96QG7 549 aa13.77□□□□□ -0.21
TRAF3IP2-211ENST00000528599 GDPD2Q9HCC8 539 aa13.77□□□□□ -0.21
TRAF3IP2-211ENST00000528599 KCNMB3Q9NPA1 279 aa13.77□□□□□ -0.21
TRAF3IP2-211ENST00000528599 PDGFCQ9NRA1 345 aa13.77□□□□□ -0.21
TRAF3IP2-211ENST00000528599 RCOR1Q9UKL0 485 aa13.77□□□□□ -0.21
TRAF3IP2-211ENST00000528599 TCHHQ07283 1943 aa13.77□□□□□ -0.21
TRAF3IP2-211ENST00000528599 SPATA31C2B4DYI2 1134 aa13.76□□□□□ -0.21
TRAF3IP2-211ENST00000528599 FIBPO43427 364 aa13.76□□□□□ -0.21
TRAF3IP2-211ENST00000528599 ADCY3O60266 1144 aa13.76□□□□□ -0.21
TRAF3IP2-211ENST00000528599 ATP9AO75110 1047 aa13.76□□□□□ -0.21
TRAF3IP2-211ENST00000528599 YEATS4O95619 227 aa13.76□□□□□ -0.21
TRAF3IP2-211ENST00000528599 ICAM3P32942 547 aa13.76□□□□□ -0.21
TRAF3IP2-211ENST00000528599 PRMT2P55345 433 aa13.76□□□□□ -0.21
TRAF3IP2-211ENST00000528599 SETQ01105 290 aaPredicted RBP13.76□□□□□ -0.21
TRAF3IP2-211ENST00000528599 STK38Q15208 465 aa13.76□□□□□ -0.21
TRAF3IP2-211ENST00000528599 CALCRLQ16602 461 aa13.76□□□□□ -0.21
TRAF3IP2-211ENST00000528599 GNPTABQ3T906 1256 aa13.76□□□□□ -0.21
TRAF3IP2-211ENST00000528599 RAET1EQ8TD07 263 aa13.76□□□□□ -0.21
TRAF3IP2-211ENST00000528599 ABHD16BQ9H3Z7 469 aa13.76□□□□□ -0.21
TRAF3IP2-211ENST00000528599 AGO4Q9HCK5 861 aaKnown RBP13.76□□□□□ -0.21
TRAF3IP2-211ENST00000528599 VTA1Q9NP79 307 aa13.76□□□□□ -0.21
TRAF3IP2-211ENST00000528599 CEP131Q9UPN4 1083 aa13.76□□□□□ -0.21
TRAF3IP2-211ENST00000528599 BMP15O95972 392 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 OR52Z1P0C646 297 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 MARCKSP29966 332 aaPredicted RBP13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 TRIM32Q13049 653 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 ACVR2BQ13705 512 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 IL17AQ16552 155 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 SLC9C1Q4G0N8 1177 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 TMEM63BQ5T3F8 832 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 TRMT44Q8IYL2 757 aaKnown RBP13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 ARMC5Q96C12 935 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 ZNF333Q96JL9 665 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 PKD2L1Q9P0L9 805 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 KIAA1217Q5T5P2 1943 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 TNRC18O15417 2968 aaPredicted RBP13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 RBM47A0AV96 593 aaKnown RBP13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 IPO5O00410 1097 aaKnown RBP13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 TBX3O15119 743 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 SPTLC2O15270 562 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 MAFGO15525 162 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 ARIH2O95376 493 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 MYCP01106 439 aaPredicted RBP13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 ZNF865P0CJ78 1059 aaPredicted RBP13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 GRK4P32298 578 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 SP2Q02086 613 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 ITGB3BPQ13352 177 aaPredicted RBP13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 MTFR1Q15390 333 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 CCDC62Q6P9F0 684 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 TRPV1Q8NER1 839 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 SLC5A5Q92911 643 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 SPATA32Q96LK8 384 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 FAM20AQ96MK3 541 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 ZNF577Q9BSK1 485 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 SCAND2PQ9GZW5 306 aaPredicted RBP13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 BCAS3Q9H6U6 928 aa13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 ZHX1Q9UKY1 873 aaPredicted RBP13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 MORC2Q9Y6X9 1032 aaPredicted RBP13.75□□□□□ -0.21
TRAF3IP2-211ENST00000528599 LAD1O00515 517 aa13.74□□□□□ -0.21
TRAF3IP2-211ENST00000528599 DHX15O43143 795 aaKnown RBP13.74□□□□□ -0.21
TRAF3IP2-211ENST00000528599 KCNA2P16389 499 aa13.74□□□□□ -0.21
TRAF3IP2-211ENST00000528599 PRPHP41219 470 aa13.74□□□□□ -0.21
TRAF3IP2-211ENST00000528599 ADCYAP1R1P41586 468 aa13.74□□□□□ -0.21
TRAF3IP2-211ENST00000528599 TXKP42681 527 aa13.74□□□□□ -0.21
TRAF3IP2-211ENST00000528599 GRIN1Q05586 938 aa13.74□□□□□ -0.21
TRAF3IP2-211ENST00000528599 MFSD14CQ5VZR4 134 aa13.74□□□□□ -0.21
TRAF3IP2-211ENST00000528599 PXYLP1Q8TE99 480 aa13.74□□□□□ -0.21
TRAF3IP2-211ENST00000528599 SCFD2Q8WU76 684 aa13.74□□□□□ -0.21
TRAF3IP2-211ENST00000528599 CDHR1Q96JP9 859 aa13.74□□□□□ -0.21
TRAF3IP2-211ENST00000528599 DDX41Q9UJV9 622 aaKnown RBP13.74□□□□□ -0.21
TRAF3IP2-211ENST00000528599 FBXO2Q9UK22 296 aaPredicted RBP13.74□□□□□ -0.21
TRAF3IP2-211ENST00000528599 MARCH6O60337 910 aa13.73□□□□□ -0.21
TRAF3IP2-211ENST00000528599 PPP6R2O75170 966 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms