RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 NDST4Q9H3R1 872 aa13.69□□□□□ -0.22
TSKU-203ENST00000527881 SH3BP1Q9Y3L3 701 aa13.69□□□□□ -0.22
TSKU-203ENST00000527881 PXDNQ92626 1479 aa13.69□□□□□ -0.22
TSKU-203ENST00000527881 KRIT1O00522 736 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 HIP1RO75146 1068 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 PLEKHA8P1O95397 391 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 PRPHP41219 470 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 RANBP1P43487 201 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 RAB27AP51159 221 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 CASP7P55210 303 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 IFIT5Q13325 482 aaKnown RBP13.68□□□□□ -0.22
TSKU-203ENST00000527881 USP38Q8NB14 1042 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 FAM129AQ9BZQ8 928 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 A0A0G2JS52 829 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 CCNE1P24864 410 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 CDK17Q00537 523 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 SLC9C1Q4G0N8 1177 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 CHADLQ6NUI6 762 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 LDHAL6AQ6ZMR3 332 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 HOOK3Q86VS8 718 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 LMNTD2Q8IXW0 634 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 STAG2Q8N3U4 1231 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 HPS3Q969F9 1004 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 IFT74Q96LB3 600 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 STRBPQ96SI9 672 aaKnown RBP13.68□□□□□ -0.22
TSKU-203ENST00000527881 DUSP9Q99956 384 aaKnown RBP13.68□□□□□ -0.22
TSKU-203ENST00000527881 DISC1Q9NRI5 854 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 AMACRQ9UHK6 382 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 SART1O43290 800 aaKnown RBP13.68□□□□□ -0.22
TSKU-203ENST00000527881 GSTA1P08263 222 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 ATP4AP20648 1035 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 HLFQ16534 295 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 DTHD1Q6ZMT9 781 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 CATIPQ7Z7H3 387 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 RNF10Q8N5U6 811 aaKnown RBP13.68□□□□□ -0.22
TSKU-203ENST00000527881 DHTKD1Q96HY7 919 aaPredicted RBP13.68□□□□□ -0.22
TSKU-203ENST00000527881 PRMT1Q99873 361 aaKnown RBP13.68□□□□□ -0.22
TSKU-203ENST00000527881 SLC52A2Q9HAB3 445 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 NLRP2Q9NX02 1062 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 AGAP1Q9UPQ3 857 aa13.68□□□□□ -0.22
TSKU-203ENST00000527881 GRID2IPA4D2P6 1211 aa13.67□□□□□ -0.22
TSKU-203ENST00000527881 CIAO1O76071 339 aa13.67□□□□□ -0.22
TSKU-203ENST00000527881 KLRC1P26715 233 aa13.67□□□□□ -0.22
TSKU-203ENST00000527881 POLE2P56282 527 aa13.67□□□□□ -0.22
TSKU-203ENST00000527881 PRPF4BQ13523 1007 aaKnown RBP13.67□□□□□ -0.22
TSKU-203ENST00000527881 RAPGEF1Q13905 1077 aa13.67□□□□□ -0.22
TSKU-203ENST00000527881 PDCD2Q16342 344 aaPredicted RBP13.67□□□□□ -0.22
TSKU-203ENST00000527881 CCDC84Q86UT8 332 aaPredicted RBP13.67□□□□□ -0.22
TSKU-203ENST00000527881 MIGA1Q8NAN2 632 aa13.67□□□□□ -0.22
TSKU-203ENST00000527881 FBF1Q8TES7 1133 aa13.67□□□□□ -0.22
TSKU-203ENST00000527881 PHF20Q9BVI0 1012 aa13.67□□□□□ -0.22
TSKU-203ENST00000527881 NEUROG2Q9H2A3 272 aa13.67□□□□□ -0.22
TSKU-203ENST00000527881 THRAP3Q9Y2W1 955 aaKnown RBP13.67□□□□□ -0.22
TSKU-203ENST00000527881 SOS2Q07890 1332 aaPredicted RBP13.67□□□□□ -0.22
TSKU-203ENST00000527881 BAZ2BQ9UIF8 2168 aaKnown RBP13.67□□□□□ -0.22
TSKU-203ENST00000527881 STXBP3O00186 592 aa13.67□□□□□ -0.22
TSKU-203ENST00000527881 RGS16O15492 202 aaPredicted RBP13.67□□□□□ -0.22
TSKU-203ENST00000527881 SLCO1A2P46721 670 aa13.67□□□□□ -0.22
TSKU-203ENST00000527881 RIPK1Q13546 671 aa13.67□□□□□ -0.22
TSKU-203ENST00000527881 BLMHQ13867 455 aa13.67□□□□□ -0.22
TSKU-203ENST00000527881 TBC1D5Q92609 795 aa13.67□□□□□ -0.22
TSKU-203ENST00000527881 L3MBTL3Q96JM7 780 aaPredicted RBP13.67□□□□□ -0.22
TSKU-203ENST00000527881 SLC5A4Q9NY91 659 aa13.67□□□□□ -0.22
TSKU-203ENST00000527881 IQSEC3Q9UPP2 1182 aaPredicted RBP13.67□□□□□ -0.22
TSKU-203ENST00000527881 TNKSO95271 1327 aa13.67□□□□□ -0.22
TSKU-203ENST00000527881 HEG1Q9ULI3 1381 aa13.67□□□□□ -0.22
TSKU-203ENST00000527881 A0A1W2PQJ5 194 aa13.67□□□□□ -0.22
TSKU-203ENST00000527881 NKRFO15226 690 aaKnown RBP eCLIP13.67□□□□□ -0.22
TSKU-203ENST00000527881 LAMB3Q13751 1172 aa13.67□□□□□ -0.22
TSKU-203ENST00000527881 ERMARDQ5T6L9 678 aa13.67□□□□□ -0.22
TSKU-203ENST00000527881 ERGIC2Q96RQ1 377 aa13.67□□□□□ -0.22
TSKU-203ENST00000527881 EPB41L4AQ9HCS5 686 aaPredicted RBP13.67□□□□□ -0.22
TSKU-203ENST00000527881 LINGO3P0C6S8 592 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 FCER1AP12319 257 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 IFI16Q16666 785 aaKnown RBP13.66□□□□□ -0.22
TSKU-203ENST00000527881 VWA3BQ502W6 1294 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 TEKT4Q8WW24 435 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 NAF1Q96HR8 494 aaKnown RBP13.66□□□□□ -0.22
TSKU-203ENST00000527881 UTP11Q9Y3A2 253 aaKnown RBP13.66□□□□□ -0.22
TSKU-203ENST00000527881 C4AP0C0L4 1744 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 C4BP0C0L5 1744 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 H0YGN5 161 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 IFIT1BQ5T764 474 aaKnown RBP13.66□□□□□ -0.22
TSKU-203ENST00000527881 NBPF10Q6P3W6 841 aaKnown RBP13.66□□□□□ -0.22
TSKU-203ENST00000527881 ADAT2Q7Z6V5 191 aaKnown RBP13.66□□□□□ -0.22
TSKU-203ENST00000527881 PPP1R12CQ9BZL4 782 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 TRIM4Q9C037 500 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 ADAMTS1Q9UHI8 967 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 SLC12A4Q9UP95 1085 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 NFS1Q9Y697 457 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 FAM170AA1A519 330 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 ANKRD33BA6NCL7 494 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 AHCYL1O43865 530 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 FERP16591 822 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 STK4Q13043 487 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 UBE3CQ15386 1083 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 IL17AQ16552 155 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 MIIPQ5JXC2 388 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 SFMBT2Q5VUG0 894 aa13.66□□□□□ -0.22
TSKU-203ENST00000527881 DAAM2Q86T65 1068 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms