RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 CD19P15391 556 aa16.58■□□□□ 0.25
USP47-207ENST00000527733 SMC1AQ14683 1233 aaKnown RBP16.58■□□□□ 0.25
USP47-207ENST00000527733 POTEDQ86YR6 584 aa16.58■□□□□ 0.25
USP47-207ENST00000527733 ACCSQ96QU6 501 aa16.58■□□□□ 0.25
USP47-207ENST00000527733 HPS5Q9UPZ3 1129 aa16.58■□□□□ 0.25
USP47-207ENST00000527733 DDIT3P35638 169 aa16.58■□□□□ 0.25
USP47-207ENST00000527733 LRMPQ12912 555 aa16.58■□□□□ 0.25
USP47-207ENST00000527733 MTERF2Q49AM1 385 aa16.58■□□□□ 0.25
USP47-207ENST00000527733 KMT5BQ4FZB7 885 aa16.58■□□□□ 0.25
USP47-207ENST00000527733 LIN9Q5TKA1 542 aa16.58■□□□□ 0.25
USP47-207ENST00000527733 LEKR1Q6ZMV7 388 aa16.58■□□□□ 0.25
USP47-207ENST00000527733 RWDD2AQ9UIY3 292 aa16.58■□□□□ 0.25
USP47-207ENST00000527733 CTNND1O60716 968 aaKnown RBP16.58■□□□□ 0.24
USP47-207ENST00000527733 PRPF6O94906 941 aaKnown RBP16.58■□□□□ 0.24
USP47-207ENST00000527733 TDP2O95551 362 aa16.58■□□□□ 0.24
USP47-207ENST00000527733 FDPSP14324 419 aaKnown RBP16.58■□□□□ 0.24
USP47-207ENST00000527733 CAPZA3Q96KX2 299 aa16.58■□□□□ 0.24
USP47-207ENST00000527733 TMEM206Q9H813 350 aa16.58■□□□□ 0.24
USP47-207ENST00000527733 PRR12Q9ULL5 1215 aa16.58■□□□□ 0.24
USP47-207ENST00000527733 ABCC6O95255 1503 aa16.58■□□□□ 0.24
USP47-207ENST00000527733 WDR64B1ANS9 1081 aa16.58■□□□□ 0.24
USP47-207ENST00000527733 PRELPP51888 382 aa16.58■□□□□ 0.24
USP47-207ENST00000527733 KRT76Q01546 638 aa16.58■□□□□ 0.24
USP47-207ENST00000527733 TYW1BQ6NUM6 668 aa16.58■□□□□ 0.24
USP47-207ENST00000527733 PPP1R9BQ96SB3 815 aa16.58■□□□□ 0.24
USP47-207ENST00000527733 ELP3Q9H9T3 547 aa16.58■□□□□ 0.24
USP47-207ENST00000527733 ABCD1P33897 745 aa16.57■□□□□ 0.24
USP47-207ENST00000527733 COPB2P35606 906 aa16.57■□□□□ 0.24
USP47-207ENST00000527733 PRAMEF18Q5VWM3 479 aa16.57■□□□□ 0.24
USP47-207ENST00000527733 GPIHBP1Q8IV16 184 aa16.57■□□□□ 0.24
USP47-207ENST00000527733 COBLO75128 1261 aa16.57■□□□□ 0.24
USP47-207ENST00000527733 DLATP10515 647 aaKnown RBP16.57■□□□□ 0.24
USP47-207ENST00000527733 P4HA1P13674 534 aa16.57■□□□□ 0.24
USP47-207ENST00000527733 GINM1Q9NU53 330 aa16.57■□□□□ 0.24
USP47-207ENST00000527733 CNTNAP5Q8WYK1 1306 aa16.57■□□□□ 0.24
USP47-207ENST00000527733 DISP2A7MBM2 1401 aa16.57■□□□□ 0.24
USP47-207ENST00000527733 DYNC1I1O14576 645 aa16.57■□□□□ 0.24
USP47-207ENST00000527733 SPOPO43791 374 aa16.57■□□□□ 0.24
USP47-207ENST00000527733 CTDNEP1O95476 244 aa16.57■□□□□ 0.24
USP47-207ENST00000527733 YWHAEP62258 255 aaKnown RBP16.57■□□□□ 0.24
USP47-207ENST00000527733 CCDC50Q8IVM0 306 aa16.57■□□□□ 0.24
USP47-207ENST00000527733 GOLGA1Q92805 767 aa16.57■□□□□ 0.24
USP47-207ENST00000527733 SCAF8Q9UPN6 1271 aaKnown RBP16.57■□□□□ 0.24
USP47-207ENST00000527733 CD2APQ9Y5K6 639 aa16.57■□□□□ 0.24
USP47-207ENST00000527733 PSMC2P35998 433 aaKnown RBP16.57■□□□□ 0.24
USP47-207ENST00000527733 SECISBP2LQ93073 1101 aaKnown RBP16.57■□□□□ 0.24
USP47-207ENST00000527733 TEX13BQ9BXU2 312 aa16.57■□□□□ 0.24
USP47-207ENST00000527733 VPS33BQ9H267 617 aa16.57■□□□□ 0.24
USP47-207ENST00000527733 ANKFY1Q9P2R3 1169 aa16.57■□□□□ 0.24
USP47-207ENST00000527733 RASAL2Q9UJF2 1139 aa16.57■□□□□ 0.24
USP47-207ENST00000527733 FSD2A1L4K1 749 aa16.56■□□□□ 0.24
USP47-207ENST00000527733 INO80B-WBP1J3KQ70 363 aa16.56■□□□□ 0.24
USP47-207ENST00000527733 C15orf52Q6ZUT6 534 aaKnown RBP16.56■□□□□ 0.24
USP47-207ENST00000527733 GIMAP8Q8ND71 665 aaPredicted RBP16.56■□□□□ 0.24
USP47-207ENST00000527733 NEK9Q8TD19 979 aa16.56■□□□□ 0.24
USP47-207ENST00000527733 FAM163AQ96GL9 167 aaPredicted RBP16.56■□□□□ 0.24
USP47-207ENST00000527733 NAPGQ99747 312 aaPredicted RBP16.56■□□□□ 0.24
USP47-207ENST00000527733 INO80BQ9C086 356 aaPredicted RBP16.56■□□□□ 0.24
USP47-207ENST00000527733 EHD4Q9H223 541 aa16.56■□□□□ 0.24
USP47-207ENST00000527733 GOLPH3LQ9H4A5 285 aa16.56■□□□□ 0.24
USP47-207ENST00000527733 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.56■□□□□ 0.24
USP47-207ENST00000527733 FAM184BQ9ULE4 1060 aa16.56■□□□□ 0.24
USP47-207ENST00000527733 SNX16P57768 344 aa16.56■□□□□ 0.24
USP47-207ENST00000527733 EXOC3L4Q17RC7 722 aa16.56■□□□□ 0.24
USP47-207ENST00000527733 UNC13DQ70J99 1090 aa16.56■□□□□ 0.24
USP47-207ENST00000527733 ZNF215Q9UL58 517 aaPredicted RBP16.56■□□□□ 0.24
USP47-207ENST00000527733 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.56■□□□□ 0.24
USP47-207ENST00000527733 IPO5O00410 1097 aaKnown RBP16.56■□□□□ 0.24
USP47-207ENST00000527733 TNNC2P02585 160 aa16.56■□□□□ 0.24
USP47-207ENST00000527733 PLCB3Q01970 1234 aa16.56■□□□□ 0.24
USP47-207ENST00000527733 FAM186BQ8IYM0 893 aa16.56■□□□□ 0.24
USP47-207ENST00000527733 DDX12PQ92771 950 aa16.56■□□□□ 0.24
USP47-207ENST00000527733 C1orf112Q9NSG2 853 aa16.56■□□□□ 0.24
USP47-207ENST00000527733 ZNF142P52746 1687 aaPredicted RBP16.56■□□□□ 0.24
USP47-207ENST00000527733 COL14A1Q05707 1796 aaKnown RBP16.55■□□□□ 0.24
USP47-207ENST00000527733 MAN2A1Q16706 1144 aa16.55■□□□□ 0.24
USP47-207ENST00000527733 CEP55Q53EZ4 464 aa16.55■□□□□ 0.24
USP47-207ENST00000527733 PIGOQ8TEQ8 1089 aa16.55■□□□□ 0.24
USP47-207ENST00000527733 CTTNBP2NLQ9P2B4 639 aa16.55■□□□□ 0.24
USP47-207ENST00000527733 AKT3Q9Y243 479 aa16.55■□□□□ 0.24
USP47-207ENST00000527733 IFIH1Q9BYX4 1025 aaKnown RBP16.55■□□□□ 0.24
USP47-207ENST00000527733 JMJD4Q9H9V9 463 aa16.55■□□□□ 0.24
USP47-207ENST00000527733 TMEM191BP0C7N4 346 aa16.55■□□□□ 0.24
USP47-207ENST00000527733 POLR2FP61218 127 aaKnown RBP16.55■□□□□ 0.24
USP47-207ENST00000527733 CUL4BQ13620 913 aa16.55■□□□□ 0.24
USP47-207ENST00000527733 MTUS1Q9ULD2 1270 aa16.55■□□□□ 0.24
USP47-207ENST00000527733 PHLPP1O60346 1717 aa16.55■□□□□ 0.24
USP47-207ENST00000527733 ALCAMQ13740 583 aa16.55■□□□□ 0.24
USP47-207ENST00000527733 STXBP3O00186 592 aa16.54■□□□□ 0.24
USP47-207ENST00000527733 LRRC63Q05C16 580 aa16.54■□□□□ 0.24
USP47-207ENST00000527733 SHC4Q6S5L8 630 aa16.54■□□□□ 0.24
USP47-207ENST00000527733 CCDC113Q9H0I3 377 aa16.54■□□□□ 0.24
USP47-207ENST00000527733 SFNP31947 248 aa16.54■□□□□ 0.24
USP47-207ENST00000527733 YARSP54577 528 aaKnown RBP16.54■□□□□ 0.24
USP47-207ENST00000527733 NEDD9Q14511 834 aa16.54■□□□□ 0.24
USP47-207ENST00000527733 PNMA8AQ86V59 439 aaPredicted RBP16.54■□□□□ 0.24
USP47-207ENST00000527733 SAMSN1Q9NSI8 373 aaKnown RBP16.54■□□□□ 0.24
USP47-207ENST00000527733 PVALEFA0A1B0GWK0 134 aa16.54■□□□□ 0.24
USP47-207ENST00000527733 TUBB2AQ13885 445 aa16.54■□□□□ 0.24
USP47-207ENST00000527733 DACT2Q5SW24 774 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms