RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 PAFAH1B1P43034 410 aa8.21□□□□□ -1.1
SOX6-208ENST00000527619 TOB1P50616 345 aaPredicted RBP8.21□□□□□ -1.1
SOX6-208ENST00000527619 HAND2P61296 217 aa8.21□□□□□ -1.1
SOX6-208ENST00000527619 DPYDQ12882 1025 aa8.21□□□□□ -1.1
SOX6-208ENST00000527619 MEA1Q16626 185 aa8.21□□□□□ -1.1
SOX6-208ENST00000527619 FAM153CQ494X1 144 aa8.21□□□□□ -1.1
SOX6-208ENST00000527619 FKBP15Q5T1M5 1219 aa8.21□□□□□ -1.1
SOX6-208ENST00000527619 GKAP1Q5VSY0 366 aaPredicted RBP8.21□□□□□ -1.1
SOX6-208ENST00000527619 MAATS1Q7Z4T9 603 aa8.21□□□□□ -1.1
SOX6-208ENST00000527619 SH3RF1Q7Z6J0 888 aa8.21□□□□□ -1.1
SOX6-208ENST00000527619 CCDC170Q8IYT3 715 aa8.21□□□□□ -1.1
SOX6-208ENST00000527619 SYCP3Q8IZU3 236 aa8.21□□□□□ -1.1
SOX6-208ENST00000527619 CTNNBL1Q8WYA6 563 aaPredicted RBP8.21□□□□□ -1.1
SOX6-208ENST00000527619 PHKBQ93100 1093 aa8.21□□□□□ -1.1
SOX6-208ENST00000527619 PAGE5Q96GU1 130 aa8.21□□□□□ -1.1
SOX6-208ENST00000527619 L3MBTL3Q96JM7 780 aaPredicted RBP8.21□□□□□ -1.1
SOX6-208ENST00000527619 ZNF570Q96NI8 536 aa8.21□□□□□ -1.1
SOX6-208ENST00000527619 YIPF3Q9GZM5 350 aa8.21□□□□□ -1.1
SOX6-208ENST00000527619 FAM153AQ9UHL3 310 aa8.21□□□□□ -1.1
SOX6-208ENST00000527619 RWDD2AQ9UIY3 292 aa8.21□□□□□ -1.1
SOX6-208ENST00000527619 NFU1Q9UMS0 254 aa8.21□□□□□ -1.1
SOX6-208ENST00000527619 DDX58O95786 925 aaKnown RBP8.2□□□□□ -1.1
SOX6-208ENST00000527619 GSTA1P08263 222 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 FOSL1P15407 271 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 DESP17661 470 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 ATF3P18847 181 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 CARSP49589 748 aaKnown RBP8.2□□□□□ -1.1
SOX6-208ENST00000527619 MYBPC3Q14896 1274 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 RCN1Q15293 331 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 LONRF1Q17RB8 773 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 PROSER3Q2NL68 480 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 RILPL1Q5EBL4 403 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 MTHFD1LQ6UB35 978 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 LRIG3Q6UXM1 1119 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 UBE2Q1Q7Z7E8 422 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 CCDC63Q8NA47 563 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 DHX38Q92620 1227 aaKnown RBP8.2□□□□□ -1.1
SOX6-208ENST00000527619 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.2□□□□□ -1.1
SOX6-208ENST00000527619 INO80BQ9C086 356 aaPredicted RBP8.2□□□□□ -1.1
SOX6-208ENST00000527619 CSRNP2Q9H175 543 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 HOXC10Q9NYD6 342 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 SEL1LQ9UBV2 794 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 SLC12A6Q9UHW9 1150 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 CEP131Q9UPN4 1083 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 PLAAQ9Y263 795 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 DUSP10Q9Y6W6 482 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 hCG_2014768A0A024R1R8 64 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 A0A1W2PQC6 194 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 GCOM1H8Y6P7 765 aaPredicted RBP8.2□□□□□ -1.1
SOX6-208ENST00000527619 COBLO75128 1261 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 TRIM37O94972 964 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 RECKO95980 971 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 PAEPP09466 180 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 MYZAPP0CAP1 466 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 FERP16591 822 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 IARSP41252 1262 aaKnown RBP8.2□□□□□ -1.1
SOX6-208ENST00000527619 RFX5P48382 616 aaPredicted RBP8.2□□□□□ -1.1
SOX6-208ENST00000527619 ZNF132P52740 706 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 PTPN12Q05209 780 aaKnown RBP8.2□□□□□ -1.1
SOX6-208ENST00000527619 CUL3Q13618 768 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 BLMHQ13867 455 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 EPHA10Q5JZY3 1008 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 MB21D1Q8N884 522 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 CNKSR1Q969H4 720 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 CLIP3Q96DZ5 547 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 SH3GL1Q99961 368 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 OSBPL10Q9BXB5 764 aa8.2□□□□□ -1.1
SOX6-208ENST00000527619 NHEJ1Q9H9Q4 299 aaPredicted RBP8.2□□□□□ -1.1
SOX6-208ENST00000527619 PAPOLBQ9NRJ5 636 aaKnown RBP8.2□□□□□ -1.1
SOX6-208ENST00000527619 ZNHIT6Q9NWK9 470 aaKnown RBP8.2□□□□□ -1.1
SOX6-208ENST00000527619 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.2□□□□□ -1.1
SOX6-208ENST00000527619 CFAP73A6NFT4 308 aa8.19□□□□□ -1.1
SOX6-208ENST00000527619 CCT8L1PA6NM43 557 aa8.19□□□□□ -1.1
SOX6-208ENST00000527619 IFIT3O14879 490 aaKnown RBP8.19□□□□□ -1.1
SOX6-208ENST00000527619 USO1O60763 962 aaKnown RBP8.19□□□□□ -1.1
SOX6-208ENST00000527619 LINGO3P0C6S8 592 aa8.19□□□□□ -1.1
SOX6-208ENST00000527619 RRM1P23921 792 aa8.19□□□□□ -1.1
SOX6-208ENST00000527619 IL4RP24394 825 aa8.19□□□□□ -1.1
SOX6-208ENST00000527619 CASP1P29466 404 aa8.19□□□□□ -1.1
SOX6-208ENST00000527619 GUCY2FP51841 1108 aa8.19□□□□□ -1.1
SOX6-208ENST00000527619 PAK1Q13153 545 aa8.19□□□□□ -1.1
SOX6-208ENST00000527619 SAFBQ15424 915 aaKnown RBP eCLIP8.19□□□□□ -1.1
SOX6-208ENST00000527619 USP49Q70CQ1 688 aa8.19□□□□□ -1.1
SOX6-208ENST00000527619 GABPB2Q8TAK5 448 aaPredicted RBP8.19□□□□□ -1.1
SOX6-208ENST00000527619 IFT81Q8WYA0 676 aa8.19□□□□□ -1.1
SOX6-208ENST00000527619 MPHOSPH6Q99547 160 aaKnown RBP8.19□□□□□ -1.1
SOX6-208ENST00000527619 MAK16Q9BXY0 300 aaKnown RBP8.19□□□□□ -1.1
SOX6-208ENST00000527619 TAF1DQ9H5J8 278 aaPredicted RBP8.19□□□□□ -1.1
SOX6-208ENST00000527619 EPB41L5Q9HCM4 733 aa8.19□□□□□ -1.1
SOX6-208ENST00000527619 PLCB1Q9NQ66 1216 aa8.19□□□□□ -1.1
SOX6-208ENST00000527619 RBM12Q9NTZ6 932 aaKnown RBP8.19□□□□□ -1.1
SOX6-208ENST00000527619 AATFQ9NY61 560 aaKnown RBP eCLIP8.19□□□□□ -1.1
SOX6-208ENST00000527619 SPO11Q9Y5K1 396 aa8.19□□□□□ -1.1
SOX6-208ENST00000527619 A6NHS1 94 aa8.19□□□□□ -1.1
SOX6-208ENST00000527619 BTBD11A6QL63 1104 aa8.19□□□□□ -1.1
SOX6-208ENST00000527619 CYP27B1O15528 508 aa8.19□□□□□ -1.1
SOX6-208ENST00000527619 HEXIM1O94992 359 aaKnown RBP8.19□□□□□ -1.1
SOX6-208ENST00000527619 LUC7L3O95232 432 aaKnown RBP8.19□□□□□ -1.1
SOX6-208ENST00000527619 IGKV5-2P06315 115 aa8.19□□□□□ -1.1
SOX6-208ENST00000527619 GLI1P08151 1106 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms