RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 MCM3APO60318 1980 aa8.5□□□□□ -1.05
VPS26B-204ENST00000527586 LAMTOR5O43504 91 aa8.5□□□□□ -1.05
VPS26B-204ENST00000527586 NARSO43776 548 aaKnown RBP8.5□□□□□ -1.05
VPS26B-204ENST00000527586 KPNA6O60684 536 aa8.5□□□□□ -1.05
VPS26B-204ENST00000527586 LRP3O75074 770 aa8.5□□□□□ -1.05
VPS26B-204ENST00000527586 TOP3BO95985 862 aaKnown RBP8.5□□□□□ -1.05
VPS26B-204ENST00000527586 PRB1P04280 392 aa8.5□□□□□ -1.05
VPS26B-204ENST00000527586 GLULP15104 373 aa8.5□□□□□ -1.05
VPS26B-204ENST00000527586 HOXB8P17481 243 aaPredicted RBP8.5□□□□□ -1.05
VPS26B-204ENST00000527586 BTG3Q14201 252 aaPredicted RBP8.5□□□□□ -1.05
VPS26B-204ENST00000527586 NAALADL2Q58DX5 795 aa8.5□□□□□ -1.05
VPS26B-204ENST00000527586 PLEKHG4Q58EX7 1191 aa8.5□□□□□ -1.05
VPS26B-204ENST00000527586 CES5AQ6NT32 575 aa8.5□□□□□ -1.05
VPS26B-204ENST00000527586 LLGL2Q6P1M3 1020 aa8.5□□□□□ -1.05
VPS26B-204ENST00000527586 KLHL23Q8NBE8 558 aa8.5□□□□□ -1.05
VPS26B-204ENST00000527586 SEPT8Q92599 483 aa8.5□□□□□ -1.05
VPS26B-204ENST00000527586 EHD4Q9H223 541 aa8.5□□□□□ -1.05
VPS26B-204ENST00000527586 CYP26B1Q9NR63 512 aa8.5□□□□□ -1.05
VPS26B-204ENST00000527586 SPATA6Q9NWH7 488 aaPredicted RBP8.5□□□□□ -1.05
VPS26B-204ENST00000527586 RAB23Q9ULC3 237 aa8.5□□□□□ -1.05
VPS26B-204ENST00000527586 CA14Q9ULX7 337 aa8.5□□□□□ -1.05
VPS26B-204ENST00000527586 WASF3Q9UPY6 502 aa8.5□□□□□ -1.05
VPS26B-204ENST00000527586 AKAP13Q12802 2813 aa8.49□□□□□ -1.05
VPS26B-204ENST00000527586 USP17L12C9JPN9 530 aa8.49□□□□□ -1.05
VPS26B-204ENST00000527586 USP17L21D6R901 530 aa8.49□□□□□ -1.05
VPS26B-204ENST00000527586 RETP07949 1114 aa8.49□□□□□ -1.05
VPS26B-204ENST00000527586 PPP4CP60510 307 aa8.49□□□□□ -1.05
VPS26B-204ENST00000527586 KCNC3Q14003 757 aa8.49□□□□□ -1.05
VPS26B-204ENST00000527586 CSRP2Q16527 193 aa8.49□□□□□ -1.05
VPS26B-204ENST00000527586 TRIM71Q2Q1W2 868 aaKnown RBP8.49□□□□□ -1.05
VPS26B-204ENST00000527586 LAIR1Q6GTX8 287 aa8.49□□□□□ -1.05
VPS26B-204ENST00000527586 PSAPL1Q6NUJ1 521 aa8.49□□□□□ -1.05
VPS26B-204ENST00000527586 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.49□□□□□ -1.05
VPS26B-204ENST00000527586 SESTD1Q86VW0 696 aa8.49□□□□□ -1.05
VPS26B-204ENST00000527586 CPXCR1Q8N123 301 aa8.49□□□□□ -1.05
VPS26B-204ENST00000527586 WNT8BQ93098 351 aa8.49□□□□□ -1.05
VPS26B-204ENST00000527586 WDR11Q9BZH6 1224 aa8.49□□□□□ -1.05
VPS26B-204ENST00000527586 CEP126Q9P2H0 1117 aa8.49□□□□□ -1.05
VPS26B-204ENST00000527586 TMX2Q9Y320 296 aa8.49□□□□□ -1.05
VPS26B-204ENST00000527586 RAI2Q9Y5P3 530 aa8.49□□□□□ -1.05
VPS26B-204ENST00000527586 MYO9AB2RTY4 2548 aa8.49□□□□□ -1.05
VPS26B-204ENST00000527586 ADAMTS20P59510 1910 aa8.48□□□□□ -1.05
VPS26B-204ENST00000527586 SCN10AQ9Y5Y9 1956 aa8.48□□□□□ -1.05
VPS26B-204ENST00000527586 ABCA12Q86UK0 2595 aa8.48□□□□□ -1.05
VPS26B-204ENST00000527586 TEX15Q9BXT5 2789 aa8.48□□□□□ -1.05
VPS26B-204ENST00000527586 PPFIA3O75145 1194 aa8.48□□□□□ -1.05
VPS26B-204ENST00000527586 WEE2P0C1S8 567 aa8.48□□□□□ -1.05
VPS26B-204ENST00000527586 NBPF7P0C2Y1 421 aaPredicted RBP8.48□□□□□ -1.05
VPS26B-204ENST00000527586 MTHFRP42898 656 aa8.48□□□□□ -1.05
VPS26B-204ENST00000527586 PTK7Q13308 1070 aa8.48□□□□□ -1.05
VPS26B-204ENST00000527586 TPRNQ4KMQ1 711 aa8.48□□□□□ -1.05
VPS26B-204ENST00000527586 PHLDB3Q6NSJ2 640 aa8.48□□□□□ -1.05
VPS26B-204ENST00000527586 SLC4A10Q6U841 1118 aa8.48□□□□□ -1.05
VPS26B-204ENST00000527586 CLEC10AQ8IUN9 316 aa8.48□□□□□ -1.05
VPS26B-204ENST00000527586 SIAH1Q8IUQ4 282 aa8.48□□□□□ -1.05
VPS26B-204ENST00000527586 SCNM1Q9BWG6 230 aa8.48□□□□□ -1.05
VPS26B-204ENST00000527586 ADAM7Q9H2U9 754 aa8.48□□□□□ -1.05
VPS26B-204ENST00000527586 SH2D4AQ9H788 454 aa8.48□□□□□ -1.05
VPS26B-204ENST00000527586 KCNK12Q9HB15 430 aa8.48□□□□□ -1.05
VPS26B-204ENST00000527586 RC3H2Q9HBD1 1191 aaKnown RBP8.48□□□□□ -1.05
VPS26B-204ENST00000527586 ARHGEF10LQ9HCE6 1279 aa8.48□□□□□ -1.05
VPS26B-204ENST00000527586 VTA1Q9NP79 307 aa8.48□□□□□ -1.05
VPS26B-204ENST00000527586 FBXO40Q9UH90 709 aa8.48□□□□□ -1.05
VPS26B-204ENST00000527586 DBR1Q9UK59 544 aaKnown RBP8.48□□□□□ -1.05
VPS26B-204ENST00000527586 USTQ9Y2C2 406 aa8.48□□□□□ -1.05
VPS26B-204ENST00000527586 RSPH10B2B2RC85 870 aa8.47□□□□□ -1.05
VPS26B-204ENST00000527586 LRRN2O75325 713 aa8.47□□□□□ -1.05
VPS26B-204ENST00000527586 EOMESO95936 686 aa8.47□□□□□ -1.05
VPS26B-204ENST00000527586 RSPH10BP0C881 870 aa8.47□□□□□ -1.05
VPS26B-204ENST00000527586 LIMK1P53667 647 aa8.47□□□□□ -1.05
VPS26B-204ENST00000527586 ITIH3Q06033 890 aa8.47□□□□□ -1.05
VPS26B-204ENST00000527586 SRSF1Q07955 248 aaKnown RBP eCLIP8.47□□□□□ -1.05
VPS26B-204ENST00000527586 AASDHQ4L235 1098 aaPredicted RBP8.47□□□□□ -1.05
VPS26B-204ENST00000527586 FAM83BQ5T0W9 1011 aa8.47□□□□□ -1.05
VPS26B-204ENST00000527586 NAA16Q6N069 864 aaPredicted RBP8.47□□□□□ -1.05
VPS26B-204ENST00000527586 PI16Q6UXB8 463 aa8.47□□□□□ -1.05
VPS26B-204ENST00000527586 ZNF605Q86T29 641 aa8.47□□□□□ -1.05
VPS26B-204ENST00000527586 TTC6Q86TZ1 520 aa8.47□□□□□ -1.05
VPS26B-204ENST00000527586 CHST13Q8NET6 341 aa8.47□□□□□ -1.05
VPS26B-204ENST00000527586 SPATA18Q8TC71 538 aa8.47□□□□□ -1.05
VPS26B-204ENST00000527586 RAVER2Q9HCJ3 691 aaKnown RBP8.47□□□□□ -1.05
VPS26B-204ENST00000527586 HMG20BQ9P0W2 317 aa8.47□□□□□ -1.05
VPS26B-204ENST00000527586 LRP2BPQ9P2M1 347 aa8.47□□□□□ -1.05
VPS26B-204ENST00000527586 MRPL42Q9Y6G3 142 aaKnown RBP8.47□□□□□ -1.05
VPS26B-204ENST00000527586 RAD50Q92878 1312 aa8.47□□□□□ -1.05
VPS26B-204ENST00000527586 DOPEY1Q5JWR5 2465 aa8.46□□□□□ -1.05
VPS26B-204ENST00000527586 A6NJR5 290 aa8.46□□□□□ -1.06
VPS26B-204ENST00000527586 ATP2A1O14983 1001 aa8.46□□□□□ -1.06
VPS26B-204ENST00000527586 RAD21O60216 631 aa8.46□□□□□ -1.06
VPS26B-204ENST00000527586 FOXD2O60548 495 aaPredicted RBP8.46□□□□□ -1.06
VPS26B-204ENST00000527586 ALDH1L1O75891 902 aa8.46□□□□□ -1.06
VPS26B-204ENST00000527586 C1QL1O75973 258 aa8.46□□□□□ -1.06
VPS26B-204ENST00000527586 XRRA1Q6P2D8 792 aa8.46□□□□□ -1.06
VPS26B-204ENST00000527586 TMEM179Q6ZVK1 233 aa8.46□□□□□ -1.06
VPS26B-204ENST00000527586 ADGRA1Q86SQ6 560 aa8.46□□□□□ -1.06
VPS26B-204ENST00000527586 PJA1Q8NG27 643 aa8.46□□□□□ -1.06
VPS26B-204ENST00000527586 NELL1Q92832 810 aa8.46□□□□□ -1.06
VPS26B-204ENST00000527586 RUNDC1Q96C34 613 aa8.46□□□□□ -1.06
VPS26B-204ENST00000527586 ZNF689Q96CS4 500 aaPredicted RBP8.46□□□□□ -1.06
VPS26B-204ENST00000527586 PURBQ96QR8 312 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms