RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 ZNF286BP0CG31 522 aa12.04□□□□□ -0.48
PRPF40B-204ENST00000527253 DNAJB2P25686 324 aa12.04□□□□□ -0.48
PRPF40B-204ENST00000527253 ICAM3P32942 547 aa12.04□□□□□ -0.48
PRPF40B-204ENST00000527253 PSEN2P49810 448 aa12.04□□□□□ -0.48
PRPF40B-204ENST00000527253 GPNMBQ14956 572 aa12.04□□□□□ -0.48
PRPF40B-204ENST00000527253 PTGISQ16647 500 aa12.04□□□□□ -0.48
PRPF40B-204ENST00000527253 DGKDQ16760 1214 aa12.04□□□□□ -0.48
PRPF40B-204ENST00000527253 APOA5Q6Q788 366 aa12.04□□□□□ -0.48
PRPF40B-204ENST00000527253 OTOP2Q7RTS6 562 aa12.04□□□□□ -0.48
PRPF40B-204ENST00000527253 DHX38Q92620 1227 aaKnown RBP12.04□□□□□ -0.48
PRPF40B-204ENST00000527253 SPATA33Q96N06 139 aa12.04□□□□□ -0.48
PRPF40B-204ENST00000527253 INPP4AQ96PE3 977 aaPredicted RBP12.04□□□□□ -0.48
PRPF40B-204ENST00000527253 ALG1Q9BT22 464 aa12.04□□□□□ -0.48
PRPF40B-204ENST00000527253 PBX4Q9BYU1 374 aa12.04□□□□□ -0.48
PRPF40B-204ENST00000527253 HDAC6Q9UBN7 1215 aa12.04□□□□□ -0.48
PRPF40B-204ENST00000527253 SEC63Q9UGP8 760 aaKnown RBP12.04□□□□□ -0.48
PRPF40B-204ENST00000527253 TET1Q8NFU7 2136 aa12.04□□□□□ -0.48
PRPF40B-204ENST00000527253 F2P00734 622 aa12.03□□□□□ -0.48
PRPF40B-204ENST00000527253 IQCF3P0C7M6 154 aa12.03□□□□□ -0.48
PRPF40B-204ENST00000527253 TGFB3P10600 412 aa12.03□□□□□ -0.48
PRPF40B-204ENST00000527253 HSPA4P34932 840 aa12.03□□□□□ -0.48
PRPF40B-204ENST00000527253 ZNF200P98182 395 aaPredicted RBP12.03□□□□□ -0.48
PRPF40B-204ENST00000527253 MFSD10Q14728 455 aa12.03□□□□□ -0.48
PRPF40B-204ENST00000527253 GRIN2CQ14957 1233 aa12.03□□□□□ -0.48
PRPF40B-204ENST00000527253 UBE2SQ16763 222 aa12.03□□□□□ -0.48
PRPF40B-204ENST00000527253 TYW1BQ6NUM6 668 aa12.03□□□□□ -0.48
PRPF40B-204ENST00000527253 KCNV1Q6PIU1 500 aa12.03□□□□□ -0.48
PRPF40B-204ENST00000527253 DEFB128Q7Z7B8 93 aa12.03□□□□□ -0.48
PRPF40B-204ENST00000527253 SMARCC2Q8TAQ2 1214 aa12.03□□□□□ -0.48
PRPF40B-204ENST00000527253 MYLIPQ8WY64 445 aa12.03□□□□□ -0.48
PRPF40B-204ENST00000527253 WNT8BQ93098 351 aa12.03□□□□□ -0.48
PRPF40B-204ENST00000527253 C16orf70Q9BSU1 422 aa12.03□□□□□ -0.48
PRPF40B-204ENST00000527253 PSTPIP2Q9H939 334 aa12.03□□□□□ -0.48
PRPF40B-204ENST00000527253 SNX14Q9Y5W7 946 aa12.03□□□□□ -0.48
PRPF40B-204ENST00000527253 CNTNAP5Q8WYK1 1306 aa12.03□□□□□ -0.48
PRPF40B-204ENST00000527253 TRIP12Q14669 1992 aaPredicted RBP12.03□□□□□ -0.48
PRPF40B-204ENST00000527253 MYO9BQ13459 2157 aa12.02□□□□□ -0.48
PRPF40B-204ENST00000527253 PPFIA4O75335 1185 aa12.02□□□□□ -0.49
PRPF40B-204ENST00000527253 CDC27P30260 824 aa12.02□□□□□ -0.49
PRPF40B-204ENST00000527253 KIAA0753Q2KHM9 967 aa12.02□□□□□ -0.49
PRPF40B-204ENST00000527253 TRIM71Q2Q1W2 868 aaKnown RBP12.02□□□□□ -0.49
PRPF40B-204ENST00000527253 PCNX4Q63HM2 1172 aa12.02□□□□□ -0.49
PRPF40B-204ENST00000527253 WWC2Q6AWC2 1192 aa12.02□□□□□ -0.49
PRPF40B-204ENST00000527253 RPUSD2Q8IZ73 545 aaKnown RBP12.02□□□□□ -0.49
PRPF40B-204ENST00000527253 SLC17A8Q8NDX2 589 aa12.02□□□□□ -0.49
PRPF40B-204ENST00000527253 TIFAQ96CG3 184 aa12.02□□□□□ -0.49
PRPF40B-204ENST00000527253 GTF2IRD1Q9UHL9 959 aa12.02□□□□□ -0.49
PRPF40B-204ENST00000527253 YBX2Q9Y2T7 364 aaKnown RBP12.02□□□□□ -0.49
PRPF40B-204ENST00000527253 TMEM265A0A087WTH1 108 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 KLF18A0A0U1RQI7 1052 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 PITPNM1O00562 1244 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 ZBTB43O43298 467 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 ATP9AO75110 1047 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 STAM2O75886 525 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 ITGB5P18084 799 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 RABGGTBP53611 331 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 KRT32Q14532 448 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 RTN1Q16799 776 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 TCTN1Q2MV58 587 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 TRAF7Q6Q0C0 670 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 SYNE3Q6ZMZ3 975 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 CYFIP1Q7L576 1253 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 HEATR3Q7Z4Q2 680 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 C7orf31Q8N865 590 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 RETREG2Q8NC44 543 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 CUL5Q93034 780 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 GPR20Q99678 358 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 ZNF576Q9H609 170 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 MLXIPQ9HAP2 919 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 NOD1Q9Y239 953 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 V9GY48 417 aaPredicted RBP12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 DOCK5Q9H7D0 1870 aa12.01□□□□□ -0.49
PRPF40B-204ENST00000527253 ADAMTS3O15072 1205 aa12□□□□□ -0.49
PRPF40B-204ENST00000527253 FIBPO43427 364 aa12□□□□□ -0.49
PRPF40B-204ENST00000527253 LGALS2P05162 132 aa12□□□□□ -0.49
PRPF40B-204ENST00000527253 MYOGP15173 224 aa12□□□□□ -0.49
PRPF40B-204ENST00000527253 ADD1P35611 737 aaKnown RBP12□□□□□ -0.49
PRPF40B-204ENST00000527253 RBL2Q08999 1139 aa12□□□□□ -0.49
PRPF40B-204ENST00000527253 APOBRQ0VD83 1088 aa12□□□□□ -0.49
PRPF40B-204ENST00000527253 BFSP2Q13515 415 aa12□□□□□ -0.49
PRPF40B-204ENST00000527253 GNPTABQ3T906 1256 aa12□□□□□ -0.49
PRPF40B-204ENST00000527253 XRRA1Q6P2D8 792 aa12□□□□□ -0.49
PRPF40B-204ENST00000527253 METTL7BQ6UX53 244 aa12□□□□□ -0.49
PRPF40B-204ENST00000527253 Q6ZUG5 572 aa12□□□□□ -0.49
PRPF40B-204ENST00000527253 JAKMIP1Q96N16 626 aaKnown RBP12□□□□□ -0.49
PRPF40B-204ENST00000527253 NKX2-4Q9H2Z4 354 aa12□□□□□ -0.49
PRPF40B-204ENST00000527253 RBM28Q9NW13 759 aaKnown RBP12□□□□□ -0.49
PRPF40B-204ENST00000527253 PCDHA6Q9UN73 950 aa12□□□□□ -0.49
PRPF40B-204ENST00000527253 PCDHA8Q9Y5H6 950 aa12□□□□□ -0.49
PRPF40B-204ENST00000527253 UBIAD1Q9Y5Z9 338 aa12□□□□□ -0.49
PRPF40B-204ENST00000527253 GOLGA8AA7E2F4 631 aa11.99□□□□□ -0.49
PRPF40B-204ENST00000527253 GOLGA8BA8MQT2 603 aa11.99□□□□□ -0.49
PRPF40B-204ENST00000527253 ZBBXA8MT70 800 aa11.99□□□□□ -0.49
PRPF40B-204ENST00000527253 STXBP3O00186 592 aa11.99□□□□□ -0.49
PRPF40B-204ENST00000527253 NBNO60934 754 aa11.99□□□□□ -0.49
PRPF40B-204ENST00000527253 PFKMP08237 780 aa11.99□□□□□ -0.49
PRPF40B-204ENST00000527253 HMGB1P09429 215 aaKnown RBP11.99□□□□□ -0.49
PRPF40B-204ENST00000527253 CKBP12277 381 aa11.99□□□□□ -0.49
PRPF40B-204ENST00000527253 SELPP16109 830 aa11.99□□□□□ -0.49
PRPF40B-204ENST00000527253 KCNA2P16389 499 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms