RNA–Protein interactions for RNA: ENST00000527047.5

PSMD13-206, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 1 (best)

Gene PSMD13, Length 1,284 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-206ENST00000527047 FAM184AQ8NB25 1140 aa13.51□□□□□ -0.25
PSMD13-206ENST00000527047 FBXO18Q8NFZ0 1043 aa13.51□□□□□ -0.25
PSMD13-206ENST00000527047 BICD2Q8TD16 824 aa13.51□□□□□ -0.25
PSMD13-206ENST00000527047 NSUN6Q8TEA1 469 aaKnown RBP13.51□□□□□ -0.25
PSMD13-206ENST00000527047 CRYGNQ8WXF5 182 aa13.51□□□□□ -0.25
PSMD13-206ENST00000527047 RMDN3Q96TC7 470 aa13.51□□□□□ -0.25
PSMD13-206ENST00000527047 TINF2Q9BSI4 451 aa13.51□□□□□ -0.25
PSMD13-206ENST00000527047 PXMP2Q9NR77 195 aa13.51□□□□□ -0.25
PSMD13-206ENST00000527047 TMEM260Q9NX78 707 aa13.51□□□□□ -0.25
PSMD13-206ENST00000527047 ASB14A6NK59 587 aa13.5□□□□□ -0.25
PSMD13-206ENST00000527047 SNAI1O95863 264 aaPredicted RBP13.5□□□□□ -0.25
PSMD13-206ENST00000527047 FOSP01100 380 aaPredicted RBP13.5□□□□□ -0.25
PSMD13-206ENST00000527047 HMGCRP04035 888 aa13.5□□□□□ -0.25
PSMD13-206ENST00000527047 GRK4P32298 578 aa13.5□□□□□ -0.25
PSMD13-206ENST00000527047 AP3B2Q13367 1082 aa13.5□□□□□ -0.25
PSMD13-206ENST00000527047 MCTP2Q6DN12 878 aa13.5□□□□□ -0.25
PSMD13-206ENST00000527047 ARMCX2Q7L311 632 aa13.5□□□□□ -0.25
PSMD13-206ENST00000527047 PACS2Q86VP3 889 aa13.5□□□□□ -0.25
PSMD13-206ENST00000527047 TNFRSF25Q93038 417 aa13.5□□□□□ -0.25
PSMD13-206ENST00000527047 C8orf76Q96K31 380 aa13.5□□□□□ -0.25
PSMD13-206ENST00000527047 IWS1Q96ST2 819 aa13.5□□□□□ -0.25
PSMD13-206ENST00000527047 PDCD2LQ9BRP1 358 aa13.5□□□□□ -0.25
PSMD13-206ENST00000527047 KATNBL1Q9H079 304 aa13.5□□□□□ -0.25
PSMD13-206ENST00000527047 BIN2Q9UBW5 565 aaPredicted RBP13.5□□□□□ -0.25
PSMD13-206ENST00000527047 PCDHA6Q9UN73 950 aa13.5□□□□□ -0.25
PSMD13-206ENST00000527047 KIF3AQ9Y496 699 aa13.5□□□□□ -0.25
PSMD13-206ENST00000527047 PCDHA8Q9Y5H6 950 aa13.5□□□□□ -0.25
PSMD13-206ENST00000527047 DDX49Q9Y6V7 483 aaKnown RBP13.5□□□□□ -0.25
PSMD13-206ENST00000527047 SPDYE3A6NKU9 549 aa13.49□□□□□ -0.25
PSMD13-206ENST00000527047 CYP2C19P33261 490 aa13.49□□□□□ -0.25
PSMD13-206ENST00000527047 SREBF1P36956 1147 aa13.49□□□□□ -0.25
PSMD13-206ENST00000527047 TRIM32Q13049 653 aa13.49□□□□□ -0.25
PSMD13-206ENST00000527047 PGM5Q15124 567 aa13.49□□□□□ -0.25
PSMD13-206ENST00000527047 VSIG10LQ86VR7 867 aa13.49□□□□□ -0.25
PSMD13-206ENST00000527047 IL31RAQ8NI17 732 aa13.49□□□□□ -0.25
PSMD13-206ENST00000527047 RASGRP4Q8TDF6 673 aa13.49□□□□□ -0.25
PSMD13-206ENST00000527047 ARMC5Q96C12 935 aa13.49□□□□□ -0.25
PSMD13-206ENST00000527047 NRBP1Q9UHY1 535 aa13.49□□□□□ -0.25
PSMD13-206ENST00000527047 EDIL3O43854 480 aa13.48□□□□□ -0.25
PSMD13-206ENST00000527047 NR3C2P08235 984 aa13.48□□□□□ -0.25
PSMD13-206ENST00000527047 CYBAP13498 195 aa13.48□□□□□ -0.25
PSMD13-206ENST00000527047 EIF2AK2P19525 551 aaKnown RBP13.48□□□□□ -0.25
PSMD13-206ENST00000527047 CACNB2Q08289 660 aaPredicted RBP13.48□□□□□ -0.25
PSMD13-206ENST00000527047 TRIM29Q14134 588 aa13.48□□□□□ -0.25
PSMD13-206ENST00000527047 BECN1Q14457 450 aa13.48□□□□□ -0.25
PSMD13-206ENST00000527047 ARHGEF16Q5VV41 709 aa13.48□□□□□ -0.25
PSMD13-206ENST00000527047 JAKMIP3Q5VZ66 844 aa13.48□□□□□ -0.25
PSMD13-206ENST00000527047 MFSD14CQ5VZR4 134 aa13.48□□□□□ -0.25
PSMD13-206ENST00000527047 PCNX4Q63HM2 1172 aa13.48□□□□□ -0.25
PSMD13-206ENST00000527047 PGBD1Q96JS3 809 aa13.48□□□□□ -0.25
PSMD13-206ENST00000527047 ANO3Q9BYT9 981 aa13.48□□□□□ -0.25
PSMD13-206ENST00000527047 MCOLN1Q9GZU1 580 aa13.48□□□□□ -0.25
PSMD13-206ENST00000527047 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.48□□□□□ -0.25
PSMD13-206ENST00000527047 KIAA0100Q14667 2235 aaKnown RBP13.47□□□□□ -0.25
PSMD13-206ENST00000527047 BTBD18B2RXH4 712 aa13.47□□□□□ -0.25
PSMD13-206ENST00000527047 B4DLN1 442 aa13.47□□□□□ -0.25
PSMD13-206ENST00000527047 INHAP05111 366 aa13.47□□□□□ -0.25
PSMD13-206ENST00000527047 ZNF865P0CJ78 1059 aaPredicted RBP13.47□□□□□ -0.25
PSMD13-206ENST00000527047 KRT2P35908 639 aa13.47□□□□□ -0.25
PSMD13-206ENST00000527047 MRPS9P82933 396 aaKnown RBP13.47□□□□□ -0.25
PSMD13-206ENST00000527047 GUCY1B3Q02153 619 aa13.47□□□□□ -0.25
PSMD13-206ENST00000527047 NR5A1Q13285 461 aa13.47□□□□□ -0.25
PSMD13-206ENST00000527047 SLC9C1Q4G0N8 1177 aa13.47□□□□□ -0.25
PSMD13-206ENST00000527047 COL13A1Q5TAT6 717 aaPredicted RBP13.47□□□□□ -0.25
PSMD13-206ENST00000527047 LARP1BQ659C4 914 aaKnown RBP13.47□□□□□ -0.25
PSMD13-206ENST00000527047 XRRA1Q6P2D8 792 aa13.47□□□□□ -0.25
PSMD13-206ENST00000527047 DIS3L2Q8IYB7 885 aaKnown RBP13.47□□□□□ -0.25
PSMD13-206ENST00000527047 TRPV1Q8NER1 839 aa13.47□□□□□ -0.25
PSMD13-206ENST00000527047 SH3TC2Q8TF17 1288 aa13.47□□□□□ -0.25
PSMD13-206ENST00000527047 ABHD16BQ9H3Z7 469 aa13.47□□□□□ -0.25
PSMD13-206ENST00000527047 NPDC1Q9NQX5 325 aaPredicted RBP13.47□□□□□ -0.25
PSMD13-206ENST00000527047 EIF3JO75822 258 aaKnown RBP13.46□□□□□ -0.25
PSMD13-206ENST00000527047 STAM2O75886 525 aa13.46□□□□□ -0.25
PSMD13-206ENST00000527047 RGS20O76081 388 aa13.46□□□□□ -0.25
PSMD13-206ENST00000527047 CYP3A4P08684 503 aa13.46□□□□□ -0.25
PSMD13-206ENST00000527047 PDCP20941 246 aa13.46□□□□□ -0.25
PSMD13-206ENST00000527047 U2AF2P26368 475 aaKnown RBP eCLIP13.46□□□□□ -0.254e-11■■■■■ 35.9
PSMD13-206ENST00000527047 UBXN2AP68543 259 aa13.46□□□□□ -0.25
PSMD13-206ENST00000527047 ARHGAP4P98171 946 aa13.46□□□□□ -0.25
PSMD13-206ENST00000527047 PDE4DQ08499 809 aa13.46□□□□□ -0.25
PSMD13-206ENST00000527047 ACVR2BQ13705 512 aa13.46□□□□□ -0.25
PSMD13-206ENST00000527047 STXBP2Q15833 593 aa13.46□□□□□ -0.25
PSMD13-206ENST00000527047 EARS2Q5JPH6 523 aaKnown RBP13.46□□□□□ -0.25
PSMD13-206ENST00000527047 PRAMEF19Q5SWL8 479 aa13.46□□□□□ -0.25
PSMD13-206ENST00000527047 TAPT1Q6NXT6 567 aa13.46□□□□□ -0.25
PSMD13-206ENST00000527047 KRT25Q7Z3Z0 450 aa13.46□□□□□ -0.25
PSMD13-206ENST00000527047 ZNF333Q96JL9 665 aa13.46□□□□□ -0.25
PSMD13-206ENST00000527047 INPP4AQ96PE3 977 aaPredicted RBP13.46□□□□□ -0.25
PSMD13-206ENST00000527047 MPHOSPH6Q99547 160 aaKnown RBP13.46□□□□□ -0.25
PSMD13-206ENST00000527047 FOXP1Q9H334 677 aaPredicted RBP13.46□□□□□ -0.25
PSMD13-206ENST00000527047 EHMT1Q9H9B1 1298 aa13.46□□□□□ -0.25
PSMD13-206ENST00000527047 VTA1Q9NP79 307 aa13.46□□□□□ -0.25
PSMD13-206ENST00000527047 CENPFP49454 3210 aa13.46□□□□□ -0.26
PSMD13-206ENST00000527047 FRMPD3Q5JV73 1810 aa13.46□□□□□ -0.26
PSMD13-206ENST00000527047 RBM47A0AV96 593 aaKnown RBP13.45□□□□□ -0.26
PSMD13-206ENST00000527047 SYT1P21579 422 aa13.45□□□□□ -0.26
PSMD13-206ENST00000527047 CCND2P30279 289 aa13.45□□□□□ -0.26
PSMD13-206ENST00000527047 CIITAP33076 1130 aa13.45□□□□□ -0.26
PSMD13-206ENST00000527047 SAFBQ15424 915 aaKnown RBP eCLIP13.45□□□□□ -0.26
PSMD13-206ENST00000527047 BRMS1Q9HCU9 246 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms