RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 STAM2O75886 525 aa12.27□□□□□ -0.45
NEDD8-205ENST00000527046 GJB1P08034 283 aa12.27□□□□□ -0.45
NEDD8-205ENST00000527046 KCNA2P16389 499 aa12.27□□□□□ -0.45
NEDD8-205ENST00000527046 TNFAIP2Q03169 654 aa12.27□□□□□ -0.45
NEDD8-205ENST00000527046 ITGB3BPQ13352 177 aaPredicted RBP12.27□□□□□ -0.45
NEDD8-205ENST00000527046 TRIM29Q14134 588 aa12.27□□□□□ -0.45
NEDD8-205ENST00000527046 Q4G0T1 1027 aa12.27□□□□□ -0.45
NEDD8-205ENST00000527046 PPP4R3AQ6IN85 833 aa12.27□□□□□ -0.45
NEDD8-205ENST00000527046 FAM173BQ6P4H8 233 aa12.27□□□□□ -0.45
NEDD8-205ENST00000527046 MOXD1Q6UVY6 613 aa12.27□□□□□ -0.45
NEDD8-205ENST00000527046 NIPA1Q7RTP0 329 aa12.27□□□□□ -0.45
NEDD8-205ENST00000527046 KLHDC9Q8NEP7 349 aa12.27□□□□□ -0.45
NEDD8-205ENST00000527046 SCFD2Q8WU76 684 aa12.27□□□□□ -0.45
NEDD8-205ENST00000527046 GJA10Q969M2 543 aa12.27□□□□□ -0.45
NEDD8-205ENST00000527046 GPRASP2Q96D09 838 aa12.27□□□□□ -0.45
NEDD8-205ENST00000527046 DEFB118Q96PH6 123 aa12.27□□□□□ -0.45
NEDD8-205ENST00000527046 RNF208Q9H0X6 261 aa12.27□□□□□ -0.45
NEDD8-205ENST00000527046 UPF3AQ9H1J1 476 aaKnown RBP12.27□□□□□ -0.45
NEDD8-205ENST00000527046 AGO4Q9HCK5 861 aaKnown RBP12.27□□□□□ -0.45
NEDD8-205ENST00000527046 OGDHLQ9ULD0 1010 aa12.27□□□□□ -0.45
NEDD8-205ENST00000527046 CENPFP49454 3210 aa12.26□□□□□ -0.45
NEDD8-205ENST00000527046 CCDC194A0A1B0GVG4 234 aa12.26□□□□□ -0.45
NEDD8-205ENST00000527046 B4DLN1 442 aa12.26□□□□□ -0.45
NEDD8-205ENST00000527046 DUSP11O75319 330 aaKnown RBP12.26□□□□□ -0.45
NEDD8-205ENST00000527046 SGPL1O95470 568 aa12.26□□□□□ -0.45
NEDD8-205ENST00000527046 TXNP10599 105 aaKnown RBP12.26□□□□□ -0.45
NEDD8-205ENST00000527046 TGFB3P10600 412 aa12.26□□□□□ -0.45
NEDD8-205ENST00000527046 AKR1A1P14550 325 aa12.26□□□□□ -0.45
NEDD8-205ENST00000527046 UBA1P22314 1058 aaKnown RBP12.26□□□□□ -0.45
NEDD8-205ENST00000527046 CNGA1P29973 690 aa12.26□□□□□ -0.45
NEDD8-205ENST00000527046 GJA9P57773 515 aa12.26□□□□□ -0.45
NEDD8-205ENST00000527046 ARHGAP1Q07960 439 aa12.26□□□□□ -0.45
NEDD8-205ENST00000527046 NBR1Q14596 966 aa12.26□□□□□ -0.45
NEDD8-205ENST00000527046 MYSM1Q5VVJ2 828 aa12.26□□□□□ -0.45
NEDD8-205ENST00000527046 B3GNT9Q6UX72 402 aa12.26□□□□□ -0.45
NEDD8-205ENST00000527046 NEK8Q86SG6 692 aa12.26□□□□□ -0.45
NEDD8-205ENST00000527046 FERMT3Q86UX7 667 aa12.26□□□□□ -0.45
NEDD8-205ENST00000527046 PLA2G4DQ86XP0 818 aa12.26□□□□□ -0.45
NEDD8-205ENST00000527046 ETNPPLQ8TBG4 499 aa12.26□□□□□ -0.45
NEDD8-205ENST00000527046 HAS1Q92839 578 aa12.26□□□□□ -0.45
NEDD8-205ENST00000527046 UIMC1Q96RL1 719 aa12.26□□□□□ -0.45
NEDD8-205ENST00000527046 TMEM60Q9H2L4 133 aa12.26□□□□□ -0.45
NEDD8-205ENST00000527046 KCNMB3Q9NPA1 279 aa12.26□□□□□ -0.45
NEDD8-205ENST00000527046 Q9Y3F1 56 aa12.26□□□□□ -0.45
NEDD8-205ENST00000527046 MSH4O15457 936 aa12.25□□□□□ -0.45
NEDD8-205ENST00000527046 MAFGO15525 162 aa12.25□□□□□ -0.45
NEDD8-205ENST00000527046 DYNC1LI2O43237 492 aaPredicted RBP12.25□□□□□ -0.45
NEDD8-205ENST00000527046 FIBPO43427 364 aa12.25□□□□□ -0.45
NEDD8-205ENST00000527046 FARP2O94887 1054 aaPredicted RBP12.25□□□□□ -0.45
NEDD8-205ENST00000527046 BRD1O95696 1058 aa12.25□□□□□ -0.45
NEDD8-205ENST00000527046 PGK1P00558 417 aa12.25□□□□□ -0.45
NEDD8-205ENST00000527046 PDCP20941 246 aa12.25□□□□□ -0.45
NEDD8-205ENST00000527046 GJA8P48165 433 aa12.25□□□□□ -0.45
NEDD8-205ENST00000527046 BECN1Q14457 450 aa12.25□□□□□ -0.45
NEDD8-205ENST00000527046 TTLL4Q14679 1199 aa12.25□□□□□ -0.45
NEDD8-205ENST00000527046 SAFBQ15424 915 aaKnown RBP eCLIP12.25□□□□□ -0.45
NEDD8-205ENST00000527046 LETM2Q2VYF4 491 aa12.25□□□□□ -0.45
NEDD8-205ENST00000527046 PRR16Q569H4 304 aa12.25□□□□□ -0.45
NEDD8-205ENST00000527046 CELF3Q5SZQ8 465 aaKnown RBP12.25□□□□□ -0.45
NEDD8-205ENST00000527046 UBE2Q1Q7Z7E8 422 aa12.25□□□□□ -0.45
NEDD8-205ENST00000527046 U2AF1L4Q8WU68 220 aaKnown RBP12.25□□□□□ -0.45
NEDD8-205ENST00000527046 SLC5A5Q92911 643 aa12.25□□□□□ -0.45
NEDD8-205ENST00000527046 MTMR9Q96QG7 549 aa12.25□□□□□ -0.45
NEDD8-205ENST00000527046 SENP7Q9BQF6 1050 aa12.25□□□□□ -0.45
NEDD8-205ENST00000527046 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.25□□□□□ -0.45
NEDD8-205ENST00000527046 KIF3AQ9Y496 699 aa12.25□□□□□ -0.45
NEDD8-205ENST00000527046 PCDHB6Q9Y5E3 794 aa12.25□□□□□ -0.45
NEDD8-205ENST00000527046 MRVI1Q9Y6F6 885 aa12.25□□□□□ -0.45
NEDD8-205ENST00000527046 GSTTP1A0A1W2PQM5 241 aa12.24□□□□□ -0.45
NEDD8-205ENST00000527046 A6NJR5 290 aa12.24□□□□□ -0.45
NEDD8-205ENST00000527046 H3BQV1 296 aa12.24□□□□□ -0.45
NEDD8-205ENST00000527046 SORBS3O60504 671 aa12.24□□□□□ -0.45
NEDD8-205ENST00000527046 PSMD10O75832 226 aa12.24□□□□□ -0.45
NEDD8-205ENST00000527046 CCNE2O96020 404 aa12.24□□□□□ -0.45
NEDD8-205ENST00000527046 HOXD8P13378 290 aaPredicted RBP12.24□□□□□ -0.45
NEDD8-205ENST00000527046 EN2P19622 333 aaPredicted RBP12.24□□□□□ -0.45
NEDD8-205ENST00000527046 MTMR1Q13613 665 aa12.24□□□□□ -0.45
NEDD8-205ENST00000527046 KIAA0100Q14667 2235 aaKnown RBP12.24□□□□□ -0.45
NEDD8-205ENST00000527046 ZNF174Q15697 407 aa12.24□□□□□ -0.45
NEDD8-205ENST00000527046 IL17AQ16552 155 aa12.24□□□□□ -0.45
NEDD8-205ENST00000527046 HSDL1Q3SXM5 330 aa12.24□□□□□ -0.45
NEDD8-205ENST00000527046 NLRX1Q86UT6 975 aa12.24□□□□□ -0.45
NEDD8-205ENST00000527046 EMID1Q96A84 441 aaPredicted RBP12.24□□□□□ -0.45
NEDD8-205ENST00000527046 CHAMP1Q96JM3 812 aa12.24□□□□□ -0.45
NEDD8-205ENST00000527046 MPHOSPH6Q99547 160 aaKnown RBP12.24□□□□□ -0.45
NEDD8-205ENST00000527046 EHMT1Q9H9B1 1298 aa12.24□□□□□ -0.45
NEDD8-205ENST00000527046 BRMS1Q9HCU9 246 aa12.24□□□□□ -0.45
NEDD8-205ENST00000527046 SYNRGQ9UMZ2 1314 aa12.24□□□□□ -0.45
NEDD8-205ENST00000527046 NFASCO94856 1347 aa12.23□□□□□ -0.45
NEDD8-205ENST00000527046 VPS37CA5D8V6 355 aaPredicted RBP12.23□□□□□ -0.45
NEDD8-205ENST00000527046 NKRFO15226 690 aaKnown RBP eCLIP12.23□□□□□ -0.45
NEDD8-205ENST00000527046 CCNT1O60563 726 aaKnown RBP12.23□□□□□ -0.45
NEDD8-205ENST00000527046 ATG7O95352 703 aa12.23□□□□□ -0.45
NEDD8-205ENST00000527046 GGPS1O95749 300 aa12.23□□□□□ -0.45
NEDD8-205ENST00000527046 ZSCAN22P10073 491 aaPredicted RBP12.23□□□□□ -0.45
NEDD8-205ENST00000527046 BEX3Q00994 111 aa12.23□□□□□ -0.45
NEDD8-205ENST00000527046 SPIRE1Q08AE8 756 aa12.23□□□□□ -0.45
NEDD8-205ENST00000527046 LRRC41Q15345 812 aa12.23□□□□□ -0.45
NEDD8-205ENST00000527046 MCTP1Q6DN14 999 aa12.23□□□□□ -0.45
NEDD8-205ENST00000527046 KCNV1Q6PIU1 500 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms