RNA–Protein interactions for RNA: ENST00000526606.1

AMBRA1-205, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 4

Gene AMBRA1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-205ENST00000526606 USH1GQ495M9 461 aa22.98■■□□□ 1.27
AMBRA1-205ENST00000526606 PI4K2BQ8TCG2 481 aa22.98■■□□□ 1.27
AMBRA1-205ENST00000526606 SYTL5Q8TDW5 730 aaPredicted RBP22.98■■□□□ 1.27
AMBRA1-205ENST00000526606 CPVLQ9H3G5 476 aa22.98■■□□□ 1.27
AMBRA1-205ENST00000526606 TCP11L1Q9NUJ3 509 aa22.98■■□□□ 1.27
AMBRA1-205ENST00000526606 PNMA2Q9UL42 364 aa22.98■■□□□ 1.27
AMBRA1-205ENST00000526606 FAM50BQ9Y247 325 aa22.98■■□□□ 1.27
AMBRA1-205ENST00000526606 RPAINQ86UA6 219 aa22.97■■□□□ 1.27
AMBRA1-205ENST00000526606 SERINC5Q86VE9 423 aa22.97■■□□□ 1.27
AMBRA1-205ENST00000526606 FBXO11Q86XK2 927 aa22.97■■□□□ 1.27
AMBRA1-205ENST00000526606 RNF135Q8IUD6 432 aa22.97■■□□□ 1.27
AMBRA1-205ENST00000526606 GPATCH3Q96I76 525 aa22.97■■□□□ 1.27
AMBRA1-205ENST00000526606 UPF3BQ9BZI7 483 aaKnown RBP22.97■■□□□ 1.27
AMBRA1-205ENST00000526606 DCTPP1Q9H773 170 aa22.97■■□□□ 1.27
AMBRA1-205ENST00000526606 MYH7BA7E2Y1 1941 aa22.97■■□□□ 1.27
AMBRA1-205ENST00000526606 NLRC5Q86WI3 1866 aa22.96■■□□□ 1.27
AMBRA1-205ENST00000526606 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.96■■□□□ 1.27
AMBRA1-205ENST00000526606 RSPH10B2B2RC85 870 aa22.96■■□□□ 1.27
AMBRA1-205ENST00000526606 RSPH10BP0C881 870 aa22.96■■□□□ 1.27
AMBRA1-205ENST00000526606 HOXD8P13378 290 aaPredicted RBP22.96■■□□□ 1.27
AMBRA1-205ENST00000526606 EMSYQ7Z589 1322 aa22.96■■□□□ 1.27
AMBRA1-205ENST00000526606 DMDP11532 3685 aa22.96■■□□□ 1.27
AMBRA1-205ENST00000526606 MBTPS2O43462 519 aa22.95■■□□□ 1.26
AMBRA1-205ENST00000526606 UPP2O95045 317 aa22.95■■□□□ 1.26
AMBRA1-205ENST00000526606 LINC00271P0C7V0 271 aa22.95■■□□□ 1.26
AMBRA1-205ENST00000526606 THPOP40225 353 aa22.95■■□□□ 1.26
AMBRA1-205ENST00000526606 HYAL1Q12794 435 aa22.95■■□□□ 1.26
AMBRA1-205ENST00000526606 STXBP2Q15833 593 aa22.95■■□□□ 1.26
AMBRA1-205ENST00000526606 CLUL1Q15846 466 aa22.95■■□□□ 1.26
AMBRA1-205ENST00000526606 PPTC7Q8NI37 304 aa22.95■■□□□ 1.26
AMBRA1-205ENST00000526606 NSUN6Q8TEA1 469 aaKnown RBP22.95■■□□□ 1.26
AMBRA1-205ENST00000526606 IWS1Q96ST2 819 aa22.95■■□□□ 1.26
AMBRA1-205ENST00000526606 KATNAL1Q9BW62 490 aa22.95■■□□□ 1.26
AMBRA1-205ENST00000526606 COL4A6Q14031 1691 aa22.94■■□□□ 1.26
AMBRA1-205ENST00000526606 LAMC2Q13753 1193 aa22.94■■□□□ 1.26
AMBRA1-205ENST00000526606 BMP8AQ7Z5Y6 402 aa22.94■■□□□ 1.26
AMBRA1-205ENST00000526606 OTUD7AQ8TE49 926 aaPredicted RBP22.94■■□□□ 1.26
AMBRA1-205ENST00000526606 EDAQ92838 391 aa22.94■■□□□ 1.26
AMBRA1-205ENST00000526606 YME1L1Q96TA2 773 aa22.94■■□□□ 1.26
AMBRA1-205ENST00000526606 RMDN3Q96TC7 470 aa22.94■■□□□ 1.26
AMBRA1-205ENST00000526606 FSD1Q9BTV5 496 aa22.94■■□□□ 1.26
AMBRA1-205ENST00000526606 UBA5Q9GZZ9 404 aa22.94■■□□□ 1.26
AMBRA1-205ENST00000526606 ALG13Q9NP73 1137 aaKnown RBP22.94■■□□□ 1.26
AMBRA1-205ENST00000526606 ZDBF2Q9HCK1 2354 aa22.93■■□□□ 1.26
AMBRA1-205ENST00000526606 SPTBN4Q9H254 2564 aa22.93■■□□□ 1.26
AMBRA1-205ENST00000526606 GOLGA8HP0CJ92 632 aa22.93■■□□□ 1.26
AMBRA1-205ENST00000526606 ALX1Q15699 326 aa22.93■■□□□ 1.26
AMBRA1-205ENST00000526606 RRP12Q5JTH9 1297 aaKnown RBP22.93■■□□□ 1.26
AMBRA1-205ENST00000526606 GRM6O15303 877 aa22.92■■□□□ 1.26
AMBRA1-205ENST00000526606 PPFIA4O75335 1185 aa22.92■■□□□ 1.26
AMBRA1-205ENST00000526606 EIF3JO75822 258 aaKnown RBP22.92■■□□□ 1.26
AMBRA1-205ENST00000526606 RGS20O76081 388 aa22.92■■□□□ 1.26
AMBRA1-205ENST00000526606 GTF2F1P35269 517 aaKnown RBP eCLIP22.92■■□□□ 1.26
AMBRA1-205ENST00000526606 TCF15Q12870 199 aa22.92■■□□□ 1.26
AMBRA1-205ENST00000526606 MYSM1Q5VVJ2 828 aa22.92■■□□□ 1.26
AMBRA1-205ENST00000526606 C16orf70Q9BSU1 422 aa22.92■■□□□ 1.26
AMBRA1-205ENST00000526606 MAF1Q9H063 256 aa22.92■■□□□ 1.26
AMBRA1-205ENST00000526606 CACNA1HO95180 2353 aa22.92■■□□□ 1.26
AMBRA1-205ENST00000526606 TTC41PQ6P2S7 1318 aa22.91■■□□□ 1.26
AMBRA1-205ENST00000526606 C5orf67F2Z3F1 127 aa22.91■■□□□ 1.26
AMBRA1-205ENST00000526606 NCK2O43639 380 aa22.91■■□□□ 1.26
AMBRA1-205ENST00000526606 ST18O60284 1047 aa22.91■■□□□ 1.26
AMBRA1-205ENST00000526606 HOXC8P31273 242 aa22.91■■□□□ 1.26
AMBRA1-205ENST00000526606 HSDL1Q3SXM5 330 aa22.91■■□□□ 1.26
AMBRA1-205ENST00000526606 C20orf194Q5TEA3 1177 aa22.91■■□□□ 1.26
AMBRA1-205ENST00000526606 DHX37Q8IY37 1157 aaKnown RBP22.91■■□□□ 1.26
AMBRA1-205ENST00000526606 TTC14Q96N46 770 aa22.91■■□□□ 1.26
AMBRA1-205ENST00000526606 CHMP4BQ9H444 224 aaKnown RBP22.91■■□□□ 1.26
AMBRA1-205ENST00000526606 TOMM22Q9NS69 142 aa22.91■■□□□ 1.26
AMBRA1-205ENST00000526606 RALGAPA2Q2PPJ7 1873 aa22.91■■□□□ 1.26
AMBRA1-205ENST00000526606 LINC01565O15544 149 aa22.9■■□□□ 1.26
AMBRA1-205ENST00000526606 SORBS3O60504 671 aa22.9■■□□□ 1.26
AMBRA1-205ENST00000526606 TBX10O75333 385 aa22.9■■□□□ 1.26
AMBRA1-205ENST00000526606 FGAP02671 866 aa22.9■■□□□ 1.26
AMBRA1-205ENST00000526606 NR3C2P08235 984 aa22.9■■□□□ 1.26
AMBRA1-205ENST00000526606 EIF2AK2P19525 551 aaKnown RBP22.9■■□□□ 1.26
AMBRA1-205ENST00000526606 MRVI1Q9Y6F6 885 aa22.9■■□□□ 1.26
AMBRA1-205ENST00000526606 PTPN5P54829 565 aa22.89■■□□□ 1.25
AMBRA1-205ENST00000526606 SP2Q02086 613 aa22.89■■□□□ 1.25
AMBRA1-205ENST00000526606 TRIM67Q6ZTA4 783 aa22.89■■□□□ 1.25
AMBRA1-205ENST00000526606 SEPT8Q92599 483 aa22.89■■□□□ 1.25
AMBRA1-205ENST00000526606 PXMP2Q9NR77 195 aa22.89■■□□□ 1.25
AMBRA1-205ENST00000526606 VPS13AQ96RL7 3174 aa22.89■■□□□ 1.25
AMBRA1-205ENST00000526606 ABCB11O95342 1321 aa22.88■■□□□ 1.25
AMBRA1-205ENST00000526606 TMEM221A6NGB7 291 aa22.88■■□□□ 1.25
AMBRA1-205ENST00000526606 M0R296 226 aa22.88■■□□□ 1.25
AMBRA1-205ENST00000526606 TREHO43280 583 aa22.88■■□□□ 1.25
AMBRA1-205ENST00000526606 BMPR1AP36894 532 aa22.88■■□□□ 1.25
AMBRA1-205ENST00000526606 SMAD4Q13485 552 aaKnown RBP22.88■■□□□ 1.25
AMBRA1-205ENST00000526606 CAMK1Q14012 370 aa22.88■■□□□ 1.25
AMBRA1-205ENST00000526606 CDC37Q16543 378 aaPredicted RBP22.88■■□□□ 1.25
AMBRA1-205ENST00000526606 CELF3Q5SZQ8 465 aaKnown RBP22.88■■□□□ 1.25
AMBRA1-205ENST00000526606 ARHGEF16Q5VV41 709 aa22.88■■□□□ 1.25
AMBRA1-205ENST00000526606 ATP6V0A1Q93050 837 aa22.88■■□□□ 1.25
AMBRA1-205ENST00000526606 PBXIP1Q96AQ6 731 aa22.88■■□□□ 1.25
AMBRA1-205ENST00000526606 POP1Q99575 1024 aaKnown RBP22.88■■□□□ 1.25
AMBRA1-205ENST00000526606 IFIH1Q9BYX4 1025 aaKnown RBP22.88■■□□□ 1.25
AMBRA1-205ENST00000526606 BCAS3Q9H6U6 928 aa22.88■■□□□ 1.25
AMBRA1-205ENST00000526606 STXBP3O00186 592 aa22.87■■□□□ 1.25
AMBRA1-205ENST00000526606 OPLAHO14841 1288 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms