RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 CDK7P50613 346 aa18.56■□□□□ 0.56
SSSCA1-202ENST00000526433 SEMA3FQ13275 785 aa18.56■□□□□ 0.56
SSSCA1-202ENST00000526433 AP3B2Q13367 1082 aa18.56■□□□□ 0.56
SSSCA1-202ENST00000526433 CELF3Q5SZQ8 465 aaKnown RBP18.56■□□□□ 0.56
SSSCA1-202ENST00000526433 MYSM1Q5VVJ2 828 aa18.56■□□□□ 0.56
SSSCA1-202ENST00000526433 GTF3C6Q969F1 213 aa18.56■□□□□ 0.56
SSSCA1-202ENST00000526433 EMID1Q96A84 441 aaPredicted RBP18.56■□□□□ 0.56
SSSCA1-202ENST00000526433 AIFM3Q96NN9 605 aa18.56■□□□□ 0.56
SSSCA1-202ENST00000526433 LIMCH1Q9UPQ0 1083 aa18.56■□□□□ 0.56
SSSCA1-202ENST00000526433 UBIAD1Q9Y5Z9 338 aa18.56■□□□□ 0.56
SSSCA1-202ENST00000526433 A0A0U1RQG5 324 aaPredicted RBP18.55■□□□□ 0.56
SSSCA1-202ENST00000526433 ARVCFO00192 962 aa18.55■□□□□ 0.56
SSSCA1-202ENST00000526433 FIBPO43427 364 aa18.55■□□□□ 0.56
SSSCA1-202ENST00000526433 SORBS3O60504 671 aa18.55■□□□□ 0.56
SSSCA1-202ENST00000526433 GGPS1O95749 300 aa18.55■□□□□ 0.56
SSSCA1-202ENST00000526433 SYN1P17600 705 aa18.55■□□□□ 0.56
SSSCA1-202ENST00000526433 UBA1P22314 1058 aaKnown RBP18.55■□□□□ 0.56
SSSCA1-202ENST00000526433 NLRP5P59047 1200 aa18.55■□□□□ 0.56
SSSCA1-202ENST00000526433 PURAQ00577 322 aaKnown RBP18.55■□□□□ 0.56
SSSCA1-202ENST00000526433 MCTP2Q6DN12 878 aa18.55■□□□□ 0.56
SSSCA1-202ENST00000526433 REXO1Q8N1G1 1221 aaKnown RBP18.55■□□□□ 0.56
SSSCA1-202ENST00000526433 BICD2Q8TD16 824 aa18.55■□□□□ 0.56
SSSCA1-202ENST00000526433 MTG1Q9BT17 334 aaPredicted RBP18.55■□□□□ 0.56
SSSCA1-202ENST00000526433 BCAS3Q9H6U6 928 aa18.55■□□□□ 0.56
SSSCA1-202ENST00000526433 MLXIPQ9HAP2 919 aa18.55■□□□□ 0.56
SSSCA1-202ENST00000526433 GRIN2DO15399 1336 aa18.54■□□□□ 0.56
SSSCA1-202ENST00000526433 PQBP1O60828 265 aaKnown RBP18.54■□□□□ 0.56
SSSCA1-202ENST00000526433 ITGB5P18084 799 aa18.54■□□□□ 0.56
SSSCA1-202ENST00000526433 PSMC6P62333 389 aa18.54■□□□□ 0.56
SSSCA1-202ENST00000526433 ITGA7Q13683 1181 aa18.54■□□□□ 0.56
SSSCA1-202ENST00000526433 ANKRD33Q7Z3H0 272 aa18.54■□□□□ 0.56
SSSCA1-202ENST00000526433 GPRASP2Q96D09 838 aa18.54■□□□□ 0.56
SSSCA1-202ENST00000526433 TOX2Q96NM4 488 aa18.54■□□□□ 0.56
SSSCA1-202ENST00000526433 ORC3Q9UBD5 711 aaPredicted RBP18.54■□□□□ 0.56
SSSCA1-202ENST00000526433 STK36Q9NRP7 1315 aa18.53■□□□□ 0.56
SSSCA1-202ENST00000526433 DCDC2CA8MYV0 355 aa18.53■□□□□ 0.56
SSSCA1-202ENST00000526433 MMP3P08254 477 aa18.53■□□□□ 0.56
SSSCA1-202ENST00000526433 SREBF1P36956 1147 aa18.53■□□□□ 0.56
SSSCA1-202ENST00000526433 NEDD9Q14511 834 aa18.53■□□□□ 0.56
SSSCA1-202ENST00000526433 RABEP1Q15276 862 aa18.53■□□□□ 0.56
SSSCA1-202ENST00000526433 SLC43A3Q8NBI5 491 aa18.53■□□□□ 0.56
SSSCA1-202ENST00000526433 RASGRP4Q8TDF6 673 aa18.53■□□□□ 0.56
SSSCA1-202ENST00000526433 SPATA33Q96N06 139 aa18.53■□□□□ 0.56
SSSCA1-202ENST00000526433 SENP7Q9BQF6 1050 aa18.53■□□□□ 0.56
SSSCA1-202ENST00000526433 MXRA8Q9BRK3 442 aa18.53■□□□□ 0.56
SSSCA1-202ENST00000526433 BACH2Q9BYV9 841 aa18.53■□□□□ 0.56
SSSCA1-202ENST00000526433 JADE2Q9NQC1 790 aa18.53■□□□□ 0.56
SSSCA1-202ENST00000526433 DOCK5Q9H7D0 1870 aa18.52■□□□□ 0.56
SSSCA1-202ENST00000526433 MAFGO15525 162 aa18.52■□□□□ 0.56
SSSCA1-202ENST00000526433 ATP9AO75110 1047 aa18.52■□□□□ 0.56
SSSCA1-202ENST00000526433 PPFIA4O75335 1185 aa18.52■□□□□ 0.56
SSSCA1-202ENST00000526433 FDPSP14324 419 aaKnown RBP18.52■□□□□ 0.56
SSSCA1-202ENST00000526433 ZNF76P36508 570 aa18.52■□□□□ 0.56
SSSCA1-202ENST00000526433 ARHGAP4P98171 946 aa18.52■□□□□ 0.56
SSSCA1-202ENST00000526433 DGKDQ16760 1214 aa18.52■□□□□ 0.56
SSSCA1-202ENST00000526433 HSDL1Q3SXM5 330 aa18.52■□□□□ 0.56
SSSCA1-202ENST00000526433 CYFIP1Q7L576 1253 aa18.52■□□□□ 0.56
SSSCA1-202ENST00000526433 SH3RF1Q7Z6J0 888 aa18.52■□□□□ 0.56
SSSCA1-202ENST00000526433 FAM177A1Q8N128 213 aaPredicted RBP18.52■□□□□ 0.56
SSSCA1-202ENST00000526433 PPTC7Q8NI37 304 aa18.52■□□□□ 0.56
SSSCA1-202ENST00000526433 CYP2W1Q8TAV3 490 aa18.52■□□□□ 0.56
SSSCA1-202ENST00000526433 CDHR1Q96JP9 859 aa18.52■□□□□ 0.56
SSSCA1-202ENST00000526433 ZSCAN31Q96LW9 406 aaPredicted RBP18.52■□□□□ 0.56
SSSCA1-202ENST00000526433 TBC1D32Q96NH3 1257 aa18.52■□□□□ 0.56
SSSCA1-202ENST00000526433 SEZ6LQ9BYH1 1024 aa18.52■□□□□ 0.56
SSSCA1-202ENST00000526433 PRKAG2Q9UGJ0 569 aa18.52■□□□□ 0.56
SSSCA1-202ENST00000526433 PCDHA4Q9UN74 947 aa18.52■□□□□ 0.56
SSSCA1-202ENST00000526433 MROH7Q68CQ1 1323 aa18.51■□□□□ 0.55
SSSCA1-202ENST00000526433 CYP3A4P08684 503 aa18.51■□□□□ 0.55
SSSCA1-202ENST00000526433 CLTBP09497 229 aa18.51■□□□□ 0.55
SSSCA1-202ENST00000526433 FAAP100Q0VG06 881 aa18.51■□□□□ 0.55
SSSCA1-202ENST00000526433 MTMR1Q13613 665 aa18.51■□□□□ 0.55
SSSCA1-202ENST00000526433 NBPF20Q3BBV1 942 aa18.51■□□□□ 0.55
SSSCA1-202ENST00000526433 CEP55Q53EZ4 464 aa18.51■□□□□ 0.55
SSSCA1-202ENST00000526433 GALNT17Q6IS24 598 aa18.51■□□□□ 0.55
SSSCA1-202ENST00000526433 BLIDQ8IZY5 108 aa18.51■□□□□ 0.55
SSSCA1-202ENST00000526433 GIMAP8Q8ND71 665 aaPredicted RBP18.51■□□□□ 0.55
SSSCA1-202ENST00000526433 NSUN7Q8NE18 718 aaKnown RBP18.51■□□□□ 0.55
SSSCA1-202ENST00000526433 CRYGNQ8WXF5 182 aa18.51■□□□□ 0.55
SSSCA1-202ENST00000526433 WASF1Q92558 559 aa18.51■□□□□ 0.55
SSSCA1-202ENST00000526433 PRDM5Q9NQX1 630 aaPredicted RBP18.51■□□□□ 0.55
SSSCA1-202ENST00000526433 PDLIM7Q9NR12 457 aa18.51■□□□□ 0.55
SSSCA1-202ENST00000526433 PCDH10Q9P2E7 1040 aa18.51■□□□□ 0.55
SSSCA1-202ENST00000526433 KCNJ14Q9UNX9 436 aa18.51■□□□□ 0.55
SSSCA1-202ENST00000526433 SCN10AQ9Y5Y9 1956 aa18.5■□□□□ 0.55
SSSCA1-202ENST00000526433 TRIM43BA6NCK2 446 aa18.5■□□□□ 0.55
SSSCA1-202ENST00000526433 MEIS1O00470 390 aa18.5■□□□□ 0.55
SSSCA1-202ENST00000526433 XBP1P17861 261 aa18.5■□□□□ 0.55
SSSCA1-202ENST00000526433 ST3GAL1Q11201 340 aa18.5■□□□□ 0.55
SSSCA1-202ENST00000526433 METTL7BQ6UX53 244 aa18.5■□□□□ 0.55
SSSCA1-202ENST00000526433 FAM126BQ8IXS8 530 aa18.5■□□□□ 0.55
SSSCA1-202ENST00000526433 KAT2BQ92831 832 aa18.5■□□□□ 0.55
SSSCA1-202ENST00000526433 TRIM43Q96BQ3 446 aaPredicted RBP18.5■□□□□ 0.55
SSSCA1-202ENST00000526433 KCNH7Q9NS40 1196 aa18.5■□□□□ 0.55
SSSCA1-202ENST00000526433 GJB4Q9NTQ9 266 aa18.5■□□□□ 0.55
SSSCA1-202ENST00000526433 TMEM39AQ9NV64 488 aa18.5■□□□□ 0.55
SSSCA1-202ENST00000526433 PKD2L1Q9P0L9 805 aa18.5■□□□□ 0.55
SSSCA1-202ENST00000526433 TLR3O15455 904 aaKnown RBP18.49■□□□□ 0.55
SSSCA1-202ENST00000526433 JAK2O60674 1132 aa18.49■□□□□ 0.55
SSSCA1-202ENST00000526433 ARP10275 920 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms