RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 ZNF576Q9H609 170 aa13.4□□□□□ -0.26
HIF3A-209ENST00000525854 PSTPIP2Q9H939 334 aa13.4□□□□□ -0.26
HIF3A-209ENST00000525854 RBM28Q9NW13 759 aaKnown RBP13.4□□□□□ -0.26
HIF3A-209ENST00000525854 CXXC1Q9P0U4 656 aaPredicted RBP13.4□□□□□ -0.26
HIF3A-209ENST00000525854 SLC4A7Q9Y6M7 1214 aa13.4□□□□□ -0.26
HIF3A-209ENST00000525854 ZBBXA8MT70 800 aa13.39□□□□□ -0.27
HIF3A-209ENST00000525854 GRXCR1A8MXD5 290 aa13.39□□□□□ -0.27
HIF3A-209ENST00000525854 IQCF3P0C7M6 154 aa13.39□□□□□ -0.27
HIF3A-209ENST00000525854 ZNF286BP0CG31 522 aa13.39□□□□□ -0.27
HIF3A-209ENST00000525854 FOSL2P15408 326 aa13.39□□□□□ -0.27
HIF3A-209ENST00000525854 ICAM3P32942 547 aa13.39□□□□□ -0.27
HIF3A-209ENST00000525854 COL9A3Q14050 684 aaPredicted RBP13.39□□□□□ -0.27
HIF3A-209ENST00000525854 KIAA0753Q2KHM9 967 aa13.39□□□□□ -0.27
HIF3A-209ENST00000525854 HSDL1Q3SXM5 330 aa13.39□□□□□ -0.27
HIF3A-209ENST00000525854 PCNX4Q63HM2 1172 aa13.39□□□□□ -0.27
HIF3A-209ENST00000525854 GDF6Q6KF10 455 aaPredicted RBP13.39□□□□□ -0.27
HIF3A-209ENST00000525854 USP17L6PQ6QN14 398 aa13.39□□□□□ -0.27
HIF3A-209ENST00000525854 DEFB128Q7Z7B8 93 aa13.39□□□□□ -0.27
HIF3A-209ENST00000525854 CMTR1Q8N1G2 835 aaKnown RBP13.39□□□□□ -0.27
HIF3A-209ENST00000525854 AFAP1L1Q8TED9 768 aa13.39□□□□□ -0.27
HIF3A-209ENST00000525854 ALG1Q9BT22 464 aa13.39□□□□□ -0.27
HIF3A-209ENST00000525854 PBX4Q9BYU1 374 aa13.39□□□□□ -0.27
HIF3A-209ENST00000525854 GTF2IRD1Q9UHL9 959 aa13.39□□□□□ -0.27
HIF3A-209ENST00000525854 KIAA1217Q5T5P2 1943 aa13.39□□□□□ -0.27
HIF3A-209ENST00000525854 SPATA31C2B4DYI2 1134 aa13.38□□□□□ -0.27
HIF3A-209ENST00000525854 HAS3O00219 553 aa13.38□□□□□ -0.27
HIF3A-209ENST00000525854 NOP56O00567 594 aaKnown RBP13.38□□□□□ -0.27
HIF3A-209ENST00000525854 MEIS2O14770 477 aa13.38□□□□□ -0.27
HIF3A-209ENST00000525854 FIBPO43427 364 aa13.38□□□□□ -0.27
HIF3A-209ENST00000525854 PARNO95453 639 aaKnown RBP13.38□□□□□ -0.27
HIF3A-209ENST00000525854 PBX2P40425 430 aa13.38□□□□□ -0.27
HIF3A-209ENST00000525854 MRPS9P82933 396 aaKnown RBP13.38□□□□□ -0.27
HIF3A-209ENST00000525854 EXOSC10Q01780 885 aaKnown RBP13.38□□□□□ -0.27
HIF3A-209ENST00000525854 SP2Q02086 613 aa13.38□□□□□ -0.27
HIF3A-209ENST00000525854 APOA5Q6Q788 366 aa13.38□□□□□ -0.27
HIF3A-209ENST00000525854 METTL7BQ6UX53 244 aa13.38□□□□□ -0.27
HIF3A-209ENST00000525854 NLRX1Q86UT6 975 aa13.38□□□□□ -0.27
HIF3A-209ENST00000525854 RAB11FIP4Q86YS3 637 aa13.38□□□□□ -0.27
HIF3A-209ENST00000525854 TEX2Q8IWB9 1127 aa13.38□□□□□ -0.27
HIF3A-209ENST00000525854 CCDC82Q8N4S0 544 aa13.38□□□□□ -0.27
HIF3A-209ENST00000525854 MAFAQ8NHW3 353 aaPredicted RBP13.38□□□□□ -0.27
HIF3A-209ENST00000525854 MYLIPQ8WY64 445 aa13.38□□□□□ -0.27
HIF3A-209ENST00000525854 ZFP91Q96JP5 570 aaPredicted RBP13.38□□□□□ -0.27
HIF3A-209ENST00000525854 FTOQ9C0B1 505 aaKnown RBP eCLIP13.38□□□□□ -0.27
HIF3A-209ENST00000525854 HDAC6Q9UBN7 1215 aa13.38□□□□□ -0.27
HIF3A-209ENST00000525854 SPDYE3A6NKU9 549 aa13.37□□□□□ -0.27
HIF3A-209ENST00000525854 ZBTB43O43298 467 aa13.37□□□□□ -0.27
HIF3A-209ENST00000525854 SORBS3O60504 671 aa13.37□□□□□ -0.27
HIF3A-209ENST00000525854 SELPP16109 830 aa13.37□□□□□ -0.27
HIF3A-209ENST00000525854 ATP2A2P16615 1042 aaKnown RBP13.37□□□□□ -0.27
HIF3A-209ENST00000525854 RCAN1P53805 252 aa13.37□□□□□ -0.27
HIF3A-209ENST00000525854 FGD1P98174 961 aa13.37□□□□□ -0.27
HIF3A-209ENST00000525854 PTK7Q13308 1070 aa13.37□□□□□ -0.27
HIF3A-209ENST00000525854 GRIN2CQ14957 1233 aa13.37□□□□□ -0.27
HIF3A-209ENST00000525854 RTN1Q16799 776 aa13.37□□□□□ -0.27
HIF3A-209ENST00000525854 HEATR3Q7Z4Q2 680 aa13.37□□□□□ -0.27
HIF3A-209ENST00000525854 RASEFQ8IZ41 740 aa13.37□□□□□ -0.27
HIF3A-209ENST00000525854 GIMAP8Q8ND71 665 aaPredicted RBP13.37□□□□□ -0.27
HIF3A-209ENST00000525854 GPKOWQ92917 476 aaPredicted RBP eCLIP13.37□□□□□ -0.27
HIF3A-209ENST00000525854 VWCEQ96DN2 955 aa13.37□□□□□ -0.27
HIF3A-209ENST00000525854 CDHR1Q96JP9 859 aa13.37□□□□□ -0.27
HIF3A-209ENST00000525854 CTAGE1Q96RT6 745 aa13.37□□□□□ -0.27
HIF3A-209ENST00000525854 SENP7Q9BQF6 1050 aa13.37□□□□□ -0.27
HIF3A-209ENST00000525854 USP26Q9BXU7 913 aa13.37□□□□□ -0.27
HIF3A-209ENST00000525854 EHMT1Q9H9B1 1298 aa13.37□□□□□ -0.27
HIF3A-209ENST00000525854 RTEL1Q9NZ71 1219 aa13.37□□□□□ -0.27
HIF3A-209ENST00000525854 LAMA2P24043 3122 aaKnown RBP13.37□□□□□ -0.27
HIF3A-209ENST00000525854 hCG_1642624A0A1W2PR95 340 aa13.36□□□□□ -0.27
HIF3A-209ENST00000525854 NEFLP07196 543 aa13.36□□□□□ -0.27
HIF3A-209ENST00000525854 RBL2Q08999 1139 aa13.36□□□□□ -0.27
HIF3A-209ENST00000525854 ADCK5Q3MIX3 580 aa13.36□□□□□ -0.27
HIF3A-209ENST00000525854 LRRC8DQ7L1W4 858 aa13.36□□□□□ -0.27
HIF3A-209ENST00000525854 CYFIP1Q7L576 1253 aa13.36□□□□□ -0.27
HIF3A-209ENST00000525854 GPRASP2Q96D09 838 aa13.36□□□□□ -0.27
HIF3A-209ENST00000525854 TCEANC2Q96MN5 208 aa13.36□□□□□ -0.27
HIF3A-209ENST00000525854 C16orf70Q9BSU1 422 aa13.36□□□□□ -0.27
HIF3A-209ENST00000525854 SLC28A3Q9HAS3 691 aa13.36□□□□□ -0.27
HIF3A-209ENST00000525854 PCDHA11Q9Y5I1 949 aa13.36□□□□□ -0.27
HIF3A-209ENST00000525854 COL6A3P12111 3177 aa13.35□□□□□ -0.27
HIF3A-209ENST00000525854 KLF18A0A0U1RQI7 1052 aa13.35□□□□□ -0.27
HIF3A-209ENST00000525854 CCDC196A0A1B0GTZ2 297 aa13.35□□□□□ -0.27
HIF3A-209ENST00000525854 H3BRB1 525 aa13.35□□□□□ -0.27
HIF3A-209ENST00000525854 hCG_1984214I3L0E3 225 aa13.35□□□□□ -0.27
HIF3A-209ENST00000525854 BAIAP3O94812 1187 aa13.35□□□□□ -0.27
HIF3A-209ENST00000525854 REC8O95072 547 aa13.35□□□□□ -0.27
HIF3A-209ENST00000525854 LGALS2P05162 132 aa13.35□□□□□ -0.27
HIF3A-209ENST00000525854 SEMA3FQ13275 785 aa13.35□□□□□ -0.27
HIF3A-209ENST00000525854 PPP1R18Q6NYC8 613 aa13.35□□□□□ -0.27
HIF3A-209ENST00000525854 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.35□□□□□ -0.27
HIF3A-209ENST00000525854 ZNF713Q8N859 430 aaPredicted RBP13.35□□□□□ -0.27
HIF3A-209ENST00000525854 PHOSPHO2Q8TCD6 241 aa13.35□□□□□ -0.27
HIF3A-209ENST00000525854 DHX38Q92620 1227 aaKnown RBP13.35□□□□□ -0.27
HIF3A-209ENST00000525854 KCNB2Q92953 911 aa13.35□□□□□ -0.27
HIF3A-209ENST00000525854 SLC9A7Q96T83 725 aa13.35□□□□□ -0.27
HIF3A-209ENST00000525854 GAS2L1Q99501 681 aaPredicted RBP13.35□□□□□ -0.27
HIF3A-209ENST00000525854 GPR20Q99678 358 aa13.35□□□□□ -0.27
HIF3A-209ENST00000525854 NKX2-4Q9H2Z4 354 aa13.35□□□□□ -0.27
HIF3A-209ENST00000525854 TUT1Q9H6E5 874 aaKnown RBP13.35□□□□□ -0.27
HIF3A-209ENST00000525854 ZNF215Q9UL58 517 aaPredicted RBP13.35□□□□□ -0.27
HIF3A-209ENST00000525854 BRPF3Q9ULD4 1205 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms