RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 TNFRSF8P28908 595 aa9.2□□□□□ -0.94
CHD7-202ENST00000524602 EIF4A3P38919 411 aaKnown RBP9.2□□□□□ -0.94
CHD7-202ENST00000524602 FKBP3Q00688 224 aaKnown RBP9.2□□□□□ -0.94
CHD7-202ENST00000524602 PDXDC1Q6P996 788 aa9.2□□□□□ -0.94
CHD7-202ENST00000524602 AFAP1L1Q8TED9 768 aa9.2□□□□□ -0.94
CHD7-202ENST00000524602 BAP1Q92560 729 aa9.2□□□□□ -0.94
CHD7-202ENST00000524602 DDX12PQ92771 950 aa9.2□□□□□ -0.94
CHD7-202ENST00000524602 CPVLQ9H3G5 476 aa9.2□□□□□ -0.94
CHD7-202ENST00000524602 VAT1LQ9HCJ6 419 aa9.2□□□□□ -0.94
CHD7-202ENST00000524602 SWAP70Q9UH65 585 aa9.2□□□□□ -0.94
CHD7-202ENST00000524602 TFR2Q9UP52 801 aa9.2□□□□□ -0.94
CHD7-202ENST00000524602 SLC37A4O43826 429 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 PRPF6O94906 941 aaKnown RBP9.19□□□□□ -0.94
CHD7-202ENST00000524602 CLK2P49760 499 aaKnown RBP9.19□□□□□ -0.94
CHD7-202ENST00000524602 MARSP56192 900 aaKnown RBP9.19□□□□□ -0.94
CHD7-202ENST00000524602 GABPAQ06546 454 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 DDR1Q08345 913 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 ASTE1Q2TB18 679 aaPredicted RBP9.19□□□□□ -0.94
CHD7-202ENST00000524602 GLE1Q53GS7 698 aaKnown RBP9.19□□□□□ -0.94
CHD7-202ENST00000524602 MYOCDQ8IZQ8 938 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 AENQ8WTP8 325 aaKnown RBP9.19□□□□□ -0.94
CHD7-202ENST00000524602 RBM17Q96I25 401 aaKnown RBP9.19□□□□□ -0.94
CHD7-202ENST00000524602 SELENOOQ9BVL4 669 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 MMRN2Q9H8L6 949 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 FAM204AQ9H8W3 233 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 FAM207AQ9NSI2 230 aaPredicted RBP9.19□□□□□ -0.94
CHD7-202ENST00000524602 BMP2KQ9NSY1 1161 aaPredicted RBP9.19□□□□□ -0.94
CHD7-202ENST00000524602 TMEM260Q9NX78 707 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 CEP72Q9P209 647 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 DUSP10Q9Y6W6 482 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 ZC3H4Q9UPT8 1303 aaKnown RBP9.19□□□□□ -0.94
CHD7-202ENST00000524602 LRRC53A6NM62 1247 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 PDE2AO00408 941 aaPredicted RBP9.19□□□□□ -0.94
CHD7-202ENST00000524602 BBOX1O75936 387 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 ZCWPW2Q504Y3 356 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 MFSD14BQ5SR56 506 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 CUL5Q93034 780 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 OSBPL9Q96SU4 736 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 COL4A3BPQ9Y5P4 624 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 GREB1LQ9C091 1923 aaPredicted RBP9.19□□□□□ -0.94
CHD7-202ENST00000524602 LTBP1Q14766 1721 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 TDP2O95551 362 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 TTLL1O95922 423 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 PLEKP08567 350 aaPredicted RBP9.19□□□□□ -0.94
CHD7-202ENST00000524602 MRPL12P52815 198 aaKnown RBP9.19□□□□□ -0.94
CHD7-202ENST00000524602 GPATCH4Q5T3I0 446 aaKnown RBP9.19□□□□□ -0.94
CHD7-202ENST00000524602 RRAGAQ7L523 313 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 CACNA2D4Q7Z3S7 1137 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 TMC4Q7Z404 712 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 EEF2KMTQ96G04 330 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 NOX5Q96PH1 765 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 UBA5Q9GZZ9 404 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 CAPN6Q9Y6Q1 641 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 KIF13BQ9NQT8 1826 aa9.19□□□□□ -0.94
CHD7-202ENST00000524602 ZNF185O15231 689 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 PAFAH1B1P43034 410 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 MAGEA1P43355 309 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 ZNF543Q08ER8 600 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 SLC9C1Q4G0N8 1177 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 DYMQ7RTS9 669 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 KRT26Q7Z3Y9 468 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 SPATA4Q8NEY3 305 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 HPS3Q969F9 1004 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 DDX25Q9UHL0 483 aaKnown RBP9.18□□□□□ -0.94
CHD7-202ENST00000524602 POTEMA6NI47 508 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 POLRMTO00411 1230 aaKnown RBP9.18□□□□□ -0.94
CHD7-202ENST00000524602 EPHB6O15197 1021 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 EDIL3O43854 480 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 SERPING1P05155 500 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 C2orf54Q08AI8 447 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 COASYQ13057 564 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 NNTQ13423 1086 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 CCDC181Q5TID7 509 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 EMBQ6PCB8 327 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 PPP4R3CPQ6ZMV5 832 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 DNAJC19Q96DA6 116 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 RSPH14Q9UHP6 348 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 MYH7BA7E2Y1 1941 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 ARFGEF1Q9Y6D6 1849 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 ANKRD31Q8N7Z5 1873 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 MOCS3O95396 460 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 EPHB4P54760 987 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 CCDC65Q8IXS2 484 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 ZC3H3Q8IXZ2 948 aaKnown RBP9.18□□□□□ -0.94
CHD7-202ENST00000524602 C10orf67Q8IYJ2 551 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 COA7Q96BR5 231 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 MTMR8Q96EF0 704 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 JMJD4Q9H9V9 463 aa9.18□□□□□ -0.94
CHD7-202ENST00000524602 FRMPD2Q68DX3 1309 aaPredicted RBP9.18□□□□□ -0.94
CHD7-202ENST00000524602 LOC102724159A0A0B4J2E5 919 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 GOLGA6BA6NDN3 693 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 A6NNZ2 444 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 PWP2Q15269 919 aaKnown RBP9.17□□□□□ -0.94
CHD7-202ENST00000524602 TUBB8Q3ZCM7 444 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 FAM26FQ5R3K3 315 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 SFMBT2Q5VUG0 894 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 HGSNATQ68CP4 663 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 MCTP2Q6DN12 878 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 SRLQ86TD4 932 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 MLXIPQ9HAP2 919 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms