RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 CEP290O15078 2479 aa17.27■□□□□ 0.35
SF3B2-202ENST00000524475 MYH7BA7E2Y1 1941 aa17.27■□□□□ 0.35
SF3B2-202ENST00000524475 KPNA6O60684 536 aa17.26■□□□□ 0.35
SF3B2-202ENST00000524475 HOXD8P13378 290 aaPredicted RBP17.26■□□□□ 0.35
SF3B2-202ENST00000524475 HMGN5P82970 282 aaKnown RBP17.26■□□□□ 0.35
SF3B2-202ENST00000524475 SEMA3FQ13275 785 aa17.26■□□□□ 0.35
SF3B2-202ENST00000524475 LAMC2Q13753 1193 aa17.26■□□□□ 0.35
SF3B2-202ENST00000524475 NEDD9Q14511 834 aa17.26■□□□□ 0.35
SF3B2-202ENST00000524475 LY6KQ17RY6 165 aa17.26■□□□□ 0.35
SF3B2-202ENST00000524475 NIPA1Q7RTP0 329 aa17.26■□□□□ 0.35
SF3B2-202ENST00000524475 AIFM3Q96NN9 605 aa17.26■□□□□ 0.35
SF3B2-202ENST00000524475 JADE2Q9NQC1 790 aa17.26■□□□□ 0.35
SF3B2-202ENST00000524475 POLR3EQ9NVU0 708 aa17.26■□□□□ 0.35
SF3B2-202ENST00000524475 SCN10AQ9Y5Y9 1956 aa17.26■□□□□ 0.35
SF3B2-202ENST00000524475 ITGB5P18084 799 aa17.25■□□□□ 0.35
SF3B2-202ENST00000524475 UBA1P22314 1058 aaKnown RBP17.25■□□□□ 0.35
SF3B2-202ENST00000524475 ARHGAP4P98171 946 aa17.25■□□□□ 0.35
SF3B2-202ENST00000524475 CEP55Q53EZ4 464 aa17.25■□□□□ 0.35
SF3B2-202ENST00000524475 CELF3Q5SZQ8 465 aaKnown RBP17.25■□□□□ 0.35
SF3B2-202ENST00000524475 MYSM1Q5VVJ2 828 aa17.25■□□□□ 0.35
SF3B2-202ENST00000524475 JAKMIP3Q5VZ66 844 aa17.25■□□□□ 0.35
SF3B2-202ENST00000524475 SLC39A5Q6ZMH5 540 aa17.25■□□□□ 0.35
SF3B2-202ENST00000524475 CCDC83Q8IWF9 413 aa17.25■□□□□ 0.35
SF3B2-202ENST00000524475 BLIDQ8IZY5 108 aa17.25■□□□□ 0.35
SF3B2-202ENST00000524475 GIMAP8Q8ND71 665 aaPredicted RBP17.25■□□□□ 0.35
SF3B2-202ENST00000524475 PPTC7Q8NI37 304 aa17.25■□□□□ 0.35
SF3B2-202ENST00000524475 COPS5Q92905 334 aa17.25■□□□□ 0.35
SF3B2-202ENST00000524475 GLT1D1Q96MS3 346 aa17.25■□□□□ 0.35
SF3B2-202ENST00000524475 MXRA8Q9BRK3 442 aa17.25■□□□□ 0.35
SF3B2-202ENST00000524475 ALG1Q9BT22 464 aa17.25■□□□□ 0.35
SF3B2-202ENST00000524475 TMEM260Q9NX78 707 aa17.25■□□□□ 0.35
SF3B2-202ENST00000524475 MEIS1O00470 390 aa17.24■□□□□ 0.35
SF3B2-202ENST00000524475 ADAMTS3O15072 1205 aa17.24■□□□□ 0.35
SF3B2-202ENST00000524475 JAK2O60674 1132 aa17.24■□□□□ 0.35
SF3B2-202ENST00000524475 MYCNP04198 464 aaPredicted RBP17.24■□□□□ 0.35
SF3B2-202ENST00000524475 PTGS1P23219 599 aa17.24■□□□□ 0.35
SF3B2-202ENST00000524475 CIITAP33076 1130 aa17.24■□□□□ 0.35
SF3B2-202ENST00000524475 IRX5P78411 483 aaPredicted RBP17.24■□□□□ 0.35
SF3B2-202ENST00000524475 BEX3Q00994 111 aa17.24■□□□□ 0.35
SF3B2-202ENST00000524475 SP2Q02086 613 aa17.24■□□□□ 0.35
SF3B2-202ENST00000524475 LRRC26Q2I0M4 334 aa17.24■□□□□ 0.35
SF3B2-202ENST00000524475 METTL7BQ6UX53 244 aa17.24■□□□□ 0.35
SF3B2-202ENST00000524475 STARD7Q9NQZ5 370 aa17.24■□□□□ 0.35
SF3B2-202ENST00000524475 RTEL1Q9NZ71 1219 aa17.24■□□□□ 0.35
SF3B2-202ENST00000524475 CD2BP2O95400 341 aaKnown RBP17.23■□□□□ 0.35
SF3B2-202ENST00000524475 GGPS1O95749 300 aa17.23■□□□□ 0.35
SF3B2-202ENST00000524475 MMP3P08254 477 aa17.23■□□□□ 0.35
SF3B2-202ENST00000524475 USP11P51784 963 aa17.23■□□□□ 0.35
SF3B2-202ENST00000524475 PURAQ00577 322 aaKnown RBP17.23■□□□□ 0.35
SF3B2-202ENST00000524475 MTMR1Q13613 665 aa17.23■□□□□ 0.35
SF3B2-202ENST00000524475 DHX37Q8IY37 1157 aaKnown RBP17.23■□□□□ 0.35
SF3B2-202ENST00000524475 SLC43A3Q8NBI5 491 aa17.23■□□□□ 0.35
SF3B2-202ENST00000524475 TMX3Q96JJ7 454 aa17.23■□□□□ 0.35
SF3B2-202ENST00000524475 PGBD1Q96JS3 809 aa17.23■□□□□ 0.35
SF3B2-202ENST00000524475 MROH7Q68CQ1 1323 aa17.22■□□□□ 0.35
SF3B2-202ENST00000524475 A0A0U1RQG5 324 aaPredicted RBP17.22■□□□□ 0.35
SF3B2-202ENST00000524475 KCNA2P16389 499 aa17.22■□□□□ 0.35
SF3B2-202ENST00000524475 SETQ01105 290 aaPredicted RBP17.22■□□□□ 0.35
SF3B2-202ENST00000524475 ANKRD33Q7Z3H0 272 aa17.22■□□□□ 0.35
SF3B2-202ENST00000524475 KRT25Q7Z3Z0 450 aa17.22■□□□□ 0.35
SF3B2-202ENST00000524475 RASGRP4Q8TDF6 673 aa17.22■□□□□ 0.35
SF3B2-202ENST00000524475 AFG1LQ8WV93 481 aa17.22■□□□□ 0.35
SF3B2-202ENST00000524475 FERMT2Q96AC1 680 aa17.22■□□□□ 0.35
SF3B2-202ENST00000524475 TOX2Q96NM4 488 aa17.22■□□□□ 0.35
SF3B2-202ENST00000524475 MTG1Q9BT17 334 aaPredicted RBP17.22■□□□□ 0.35
SF3B2-202ENST00000524475 KCNJ14Q9UNX9 436 aa17.22■□□□□ 0.35
SF3B2-202ENST00000524475 NR2E3Q9Y5X4 410 aa17.22■□□□□ 0.35
SF3B2-202ENST00000524475 IGLV3-22A0A075B6J6 115 aa17.21■□□□□ 0.35
SF3B2-202ENST00000524475 EVI5O60447 810 aa17.21■□□□□ 0.35
SF3B2-202ENST00000524475 PPFIA4O75335 1185 aa17.21■□□□□ 0.35
SF3B2-202ENST00000524475 MMP1P03956 469 aa17.21■□□□□ 0.35
SF3B2-202ENST00000524475 CDK7P50613 346 aa17.21■□□□□ 0.35
SF3B2-202ENST00000524475 RTP1P59025 263 aa17.21■□□□□ 0.35
SF3B2-202ENST00000524475 DGKDQ16760 1214 aa17.21■□□□□ 0.35
SF3B2-202ENST00000524475 MOXD1Q6UVY6 613 aa17.21■□□□□ 0.35
SF3B2-202ENST00000524475 CXCL17Q6UXB2 119 aa17.21■□□□□ 0.35
SF3B2-202ENST00000524475 DPF3Q92784 378 aa17.21■□□□□ 0.35
SF3B2-202ENST00000524475 ZFP91Q96JP5 570 aaPredicted RBP17.21■□□□□ 0.35
SF3B2-202ENST00000524475 MLXIPQ9HAP2 919 aa17.21■□□□□ 0.35
SF3B2-202ENST00000524475 BRMS1Q9HCU9 246 aa17.21■□□□□ 0.35
SF3B2-202ENST00000524475 KCNH7Q9NS40 1196 aa17.21■□□□□ 0.35
SF3B2-202ENST00000524475 NFASCO94856 1347 aa17.21■□□□□ 0.34
SF3B2-202ENST00000524475 DOCK5Q9H7D0 1870 aa17.2■□□□□ 0.34
SF3B2-202ENST00000524475 CYP3A7-CYP3A51PA0A087WV96 503 aa17.2■□□□□ 0.34
SF3B2-202ENST00000524475 FAM86B1E9PN63 330 aa17.2■□□□□ 0.34
SF3B2-202ENST00000524475 ARVCFO00192 962 aa17.2■□□□□ 0.34
SF3B2-202ENST00000524475 FAM86B2P0C5J1 330 aa17.2■□□□□ 0.34
SF3B2-202ENST00000524475 CYP3A7P24462 503 aa17.2■□□□□ 0.34
SF3B2-202ENST00000524475 ZNF76P36508 570 aa17.2■□□□□ 0.34
SF3B2-202ENST00000524475 ATN1P54259 1190 aaPredicted RBP17.2■□□□□ 0.34
SF3B2-202ENST00000524475 TRIM29Q14134 588 aa17.2■□□□□ 0.34
SF3B2-202ENST00000524475 HSDL1Q3SXM5 330 aa17.2■□□□□ 0.34
SF3B2-202ENST00000524475 SPATA33Q96N06 139 aa17.2■□□□□ 0.34
SF3B2-202ENST00000524475 KIF3AQ9Y496 699 aa17.2■□□□□ 0.34
SF3B2-202ENST00000524475 EDIL3O43854 480 aa17.19■□□□□ 0.34
SF3B2-202ENST00000524475 ATP9AO75110 1047 aa17.19■□□□□ 0.34
SF3B2-202ENST00000524475 F2P00734 622 aa17.19■□□□□ 0.34
SF3B2-202ENST00000524475 KRT2P35908 639 aa17.19■□□□□ 0.34
SF3B2-202ENST00000524475 NONOQ15233 471 aaKnown RBP eCLIP17.19■□□□□ 0.34
SF3B2-202ENST00000524475 CYFIP1Q7L576 1253 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms