RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 PLIN2Q99541 437 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 TSG101Q99816 390 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 TRIM9Q9C026 710 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 ACAD9Q9H845 621 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 IFNKQ9P0W0 207 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 CLEC11AQ9Y240 323 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 SNCAIPQ9Y6H5 919 aa11.15□□□□□ -0.62
VPS13B-212ENST00000524330 ZNF536O15090 1300 aa11.14□□□□□ -0.63
VPS13B-212ENST00000524330 ADM5C9JUS6 153 aa11.14□□□□□ -0.63
VPS13B-212ENST00000524330 MEIS1O00470 390 aa11.14□□□□□ -0.63
VPS13B-212ENST00000524330 MSH4O15457 936 aa11.14□□□□□ -0.63
VPS13B-212ENST00000524330 DKC1O60832 514 aaKnown RBP eCLIP11.14□□□□□ -0.63
VPS13B-212ENST00000524330 SSBP05455 408 aaKnown RBP eCLIP11.14□□□□□ -0.63
VPS13B-212ENST00000524330 TPM1P09493 284 aa11.14□□□□□ -0.63
VPS13B-212ENST00000524330 CCND2P30279 289 aa11.14□□□□□ -0.63
VPS13B-212ENST00000524330 STAT3P40763 770 aa11.14□□□□□ -0.63
VPS13B-212ENST00000524330 PPIL2Q13356 520 aa11.14□□□□□ -0.63
VPS13B-212ENST00000524330 PPP2R5CQ13362 524 aa11.14□□□□□ -0.63
VPS13B-212ENST00000524330 NSMFQ6X4W1 530 aa11.14□□□□□ -0.63
VPS13B-212ENST00000524330 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.14□□□□□ -0.63
VPS13B-212ENST00000524330 GIMAP8Q8ND71 665 aaPredicted RBP11.14□□□□□ -0.63
VPS13B-212ENST00000524330 SYTL5Q8TDW5 730 aaPredicted RBP11.14□□□□□ -0.63
VPS13B-212ENST00000524330 NSUN6Q8TEA1 469 aaKnown RBP11.14□□□□□ -0.63
VPS13B-212ENST00000524330 NELFBQ8WX92 580 aa11.14□□□□□ -0.63
VPS13B-212ENST00000524330 CLEC4DQ8WXI8 215 aa11.14□□□□□ -0.63
VPS13B-212ENST00000524330 SLC5A5Q92911 643 aa11.14□□□□□ -0.63
VPS13B-212ENST00000524330 PNMA5Q96PV4 448 aa11.14□□□□□ -0.63
VPS13B-212ENST00000524330 MMTAG2Q9BU76 263 aaKnown RBP11.14□□□□□ -0.63
VPS13B-212ENST00000524330 TAF1DQ9H5J8 278 aaPredicted RBP11.14□□□□□ -0.63
VPS13B-212ENST00000524330 TBC1D22BQ9NU19 505 aa11.14□□□□□ -0.63
VPS13B-212ENST00000524330 FANCLQ9NW38 375 aa11.14□□□□□ -0.63
VPS13B-212ENST00000524330 ADAMTS5Q9UNA0 930 aa11.14□□□□□ -0.63
VPS13B-212ENST00000524330 KIAA1024Q9UPX6 916 aa11.14□□□□□ -0.63
VPS13B-212ENST00000524330 CTNND2Q9UQB3 1225 aa11.14□□□□□ -0.63
VPS13B-212ENST00000524330 PHIPQ8WWQ0 1821 aa11.14□□□□□ -0.63
VPS13B-212ENST00000524330 PFASO15067 1338 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 RPTORQ8N122 1335 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 A0A087WWV3 80 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 SPDYE5A6NIY4 337 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 PPP1R3GB7ZBB8 358 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 FAM86B1E9PN63 330 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 EDIL3O43854 480 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 FAM86B2P0C5J1 330 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 PLA2G4BP0C869 781 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 IDEP14735 1019 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 RPS6P62753 249 aaKnown RBP11.13□□□□□ -0.63
VPS13B-212ENST00000524330 FKBP1BP68106 108 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 MCM6Q14566 821 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 PLS1Q14651 629 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 EPHA7Q15375 998 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 GNPTABQ3T906 1256 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 GADL1Q6ZQY3 521 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 STXBP4Q6ZWJ1 553 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 ADSSL1Q8N142 457 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 NACC1Q96RE7 527 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 RMDN3Q96TC7 470 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 XPO4Q9C0E2 1151 aaKnown RBP11.13□□□□□ -0.63
VPS13B-212ENST00000524330 JADE2Q9NQC1 790 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 HOMER2Q9NSB8 354 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 PNMA3Q9UL41 463 aa11.13□□□□□ -0.63
VPS13B-212ENST00000524330 RBBP6Q7Z6E9 1792 aaKnown RBP11.13□□□□□ -0.63
VPS13B-212ENST00000524330 FRMPD4Q14CM0 1322 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 SSC5DA1L4H1 1573 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 IGLV3-22A0A075B6J6 115 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 A0A0G2JLL6 359 aaPredicted RBP11.12□□□□□ -0.63
VPS13B-212ENST00000524330 IPO5O00410 1097 aaKnown RBP11.12□□□□□ -0.63
VPS13B-212ENST00000524330 NFIBO00712 420 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 SLC25A27O95847 323 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 GAP43P17677 238 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 BMP6P22004 513 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 CCNE1P24864 410 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 EEF1GP26641 437 aaKnown RBP11.12□□□□□ -0.63
VPS13B-212ENST00000524330 FOXR2Q6PJQ5 311 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 CCDC186Q7Z3E2 898 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 MIER3Q7Z3K6 550 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 PRRT2Q7Z6L0 340 aaPredicted RBP11.12□□□□□ -0.63
VPS13B-212ENST00000524330 GPBP1Q86WP2 473 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 RDM1Q8NG50 284 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 TBC1D5Q92609 795 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 LENG9Q96B70 501 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 TRIM47Q96LD4 638 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 CCDC43Q96MW1 224 aaKnown RBP11.12□□□□□ -0.63
VPS13B-212ENST00000524330 IWS1Q96ST2 819 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 MTRQ99707 1265 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 EIF2AK1Q9BQI3 630 aaKnown RBP11.12□□□□□ -0.63
VPS13B-212ENST00000524330 THAP9Q9H5L6 903 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 ELP3Q9H9T3 547 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 BLOC1S4Q9NUP1 217 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 PANK4Q9NVE7 773 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 KCND2Q9NZV8 630 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 ADD3Q9UEY8 706 aaKnown RBP11.12□□□□□ -0.63
VPS13B-212ENST00000524330 UBIAD1Q9Y5Z9 338 aa11.12□□□□□ -0.63
VPS13B-212ENST00000524330 POLR2AP24928 1970 aaKnown RBP11.12□□□□□ -0.63
VPS13B-212ENST00000524330 AP5Z1O43299 807 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 CCP110O43303 1012 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 KLRC4O43908 158 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 TBCAO75347 108 aaKnown RBP11.11□□□□□ -0.63
VPS13B-212ENST00000524330 PSMD10O75832 226 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 EYA4O95677 639 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 PRKCSHP14314 528 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms