RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 MEFVO15553 781 aaPredicted RBP8.08□□□□□ -1.12
SKP1-213ENST00000524288 LCP1P13796 627 aa8.08□□□□□ -1.12
SKP1-213ENST00000524288 STRN3Q13033 797 aa8.08□□□□□ -1.12
SKP1-213ENST00000524288 MAMDC2Q7Z304 686 aaPredicted RBP8.08□□□□□ -1.12
SKP1-213ENST00000524288 MTDHQ86UE4 582 aaKnown RBP8.08□□□□□ -1.12
SKP1-213ENST00000524288 CCDC103Q8IW40 242 aa8.08□□□□□ -1.12
SKP1-213ENST00000524288 TMEM52Q8NDY8 209 aa8.08□□□□□ -1.12
SKP1-213ENST00000524288 NPLOC4Q8TAT6 608 aa8.08□□□□□ -1.12
SKP1-213ENST00000524288 MAGEB10Q96LZ2 347 aaPredicted RBP8.08□□□□□ -1.12
SKP1-213ENST00000524288 JMJD8Q96S16 334 aa8.08□□□□□ -1.12
SKP1-213ENST00000524288 CNTD2Q9H8S5 307 aa8.08□□□□□ -1.12
SKP1-213ENST00000524288 INTS7Q9NVH2 962 aaKnown RBP8.08□□□□□ -1.12
SKP1-213ENST00000524288 MAPRE3Q9UPY8 281 aa8.08□□□□□ -1.12
SKP1-213ENST00000524288 PCDHA8Q9Y5H6 950 aa8.08□□□□□ -1.12
SKP1-213ENST00000524288 FGF10O15520 208 aaPredicted RBP8.07□□□□□ -1.12
SKP1-213ENST00000524288 MSCO60682 206 aa8.07□□□□□ -1.12
SKP1-213ENST00000524288 GUCY1A3Q02108 690 aa8.07□□□□□ -1.12
SKP1-213ENST00000524288 NR1I3Q14994 352 aa8.07□□□□□ -1.12
SKP1-213ENST00000524288 STYK1Q6J9G0 422 aa8.07□□□□□ -1.12
SKP1-213ENST00000524288 DCAF4Q8WV16 495 aa8.07□□□□□ -1.12
SKP1-213ENST00000524288 HOMER2Q9NSB8 354 aa8.07□□□□□ -1.12
SKP1-213ENST00000524288 KLHL14Q9P2G3 628 aa8.07□□□□□ -1.12
SKP1-213ENST00000524288 IMPACTQ9P2X3 320 aa8.07□□□□□ -1.12
SKP1-213ENST00000524288 G3BP2Q9UN86 482 aaKnown RBP8.07□□□□□ -1.12
SKP1-213ENST00000524288 TCRBV16S1A1N1A0A5B0 115 aa8.06□□□□□ -1.12
SKP1-213ENST00000524288 MARCH6O60337 910 aa8.06□□□□□ -1.12
SKP1-213ENST00000524288 ASLP04424 464 aa8.06□□□□□ -1.12
SKP1-213ENST00000524288 SDHBP21912 280 aa8.06□□□□□ -1.12
SKP1-213ENST00000524288 IGFALSP35858 605 aa8.06□□□□□ -1.12
SKP1-213ENST00000524288 CORO7P57737 925 aa8.06□□□□□ -1.12
SKP1-213ENST00000524288 RBM10P98175 930 aaKnown RBP8.06□□□□□ -1.12
SKP1-213ENST00000524288 SSPNQ14714 243 aa8.06□□□□□ -1.12
SKP1-213ENST00000524288 RAB3GAP1Q15042 981 aa8.06□□□□□ -1.12
SKP1-213ENST00000524288 SEPT7Q16181 437 aaKnown RBP8.06□□□□□ -1.12
SKP1-213ENST00000524288 SKOR2Q2VWA4 1001 aaPredicted RBP8.06□□□□□ -1.12
SKP1-213ENST00000524288 PIK3R6Q5UE93 754 aa8.06□□□□□ -1.12
SKP1-213ENST00000524288 LILRA6Q6PI73 481 aa8.06□□□□□ -1.12
SKP1-213ENST00000524288 FERMT3Q86UX7 667 aa8.06□□□□□ -1.12
SKP1-213ENST00000524288 PPM1KQ8N3J5 372 aa8.06□□□□□ -1.12
SKP1-213ENST00000524288 ATL2Q8NHH9 583 aa8.06□□□□□ -1.12
SKP1-213ENST00000524288 A0A1W2PQ27 194 aa8.05□□□□□ -1.12
SKP1-213ENST00000524288 A0A1W2PQ64 194 aa8.05□□□□□ -1.12
SKP1-213ENST00000524288 A0A1W2PQC6 194 aa8.05□□□□□ -1.12
SKP1-213ENST00000524288 A0A1W2PQD8 194 aa8.05□□□□□ -1.12
SKP1-213ENST00000524288 INHBBP09529 407 aa8.05□□□□□ -1.12
SKP1-213ENST00000524288 PDGFRBP09619 1106 aa8.05□□□□□ -1.12
SKP1-213ENST00000524288 KIR3DS1Q14943 382 aa8.05□□□□□ -1.12
SKP1-213ENST00000524288 CPNE8Q86YQ8 564 aa8.05□□□□□ -1.12
SKP1-213ENST00000524288 AFAP1L2Q8N4X5 818 aa8.05□□□□□ -1.12
SKP1-213ENST00000524288 MZB1Q8WU39 189 aa8.05□□□□□ -1.12
SKP1-213ENST00000524288 MCM8Q9UJA3 840 aa8.05□□□□□ -1.12
SKP1-213ENST00000524288 ADAMTS20P59510 1910 aa8.04□□□□□ -1.12
SKP1-213ENST00000524288 AQP7O14520 342 aa8.04□□□□□ -1.12
SKP1-213ENST00000524288 SRGAP3O43295 1099 aa8.04□□□□□ -1.12
SKP1-213ENST00000524288 TBC1D8O95759 1140 aa8.04□□□□□ -1.12
SKP1-213ENST00000524288 S100BP04271 92 aaPredicted RBP8.04□□□□□ -1.12
SKP1-213ENST00000524288 SRGAP2CP0DJJ0 459 aa8.04□□□□□ -1.12
SKP1-213ENST00000524288 PI3P19957 117 aa8.04□□□□□ -1.12
SKP1-213ENST00000524288 EPHB3P54753 998 aa8.04□□□□□ -1.12
SKP1-213ENST00000524288 INF2Q27J81 1249 aa8.04□□□□□ -1.12
SKP1-213ENST00000524288 CFAP100Q494V2 611 aa8.04□□□□□ -1.12
SKP1-213ENST00000524288 MBLAC2Q68D91 279 aa8.04□□□□□ -1.12
SKP1-213ENST00000524288 ABHD17CQ6PCB6 329 aa8.04□□□□□ -1.12
SKP1-213ENST00000524288 LHFPL2Q6ZUX7 228 aa8.04□□□□□ -1.12
SKP1-213ENST00000524288 DDX46Q7L014 1031 aaKnown RBP8.04□□□□□ -1.12
SKP1-213ENST00000524288 TMC6Q7Z403 805 aa8.04□□□□□ -1.12
SKP1-213ENST00000524288 DIO2Q92813 273 aa8.04□□□□□ -1.12
SKP1-213ENST00000524288 MTFR1LQ9H019 292 aa8.04□□□□□ -1.12
SKP1-213ENST00000524288 NISCHQ9Y2I1 1504 aa8.03□□□□□ -1.12
SKP1-213ENST00000524288 NUDT19A8MXV4 375 aa8.03□□□□□ -1.12
SKP1-213ENST00000524288 LTBRP36941 435 aa8.03□□□□□ -1.12
SKP1-213ENST00000524288 MAPKAPK2P49137 400 aa8.03□□□□□ -1.12
SKP1-213ENST00000524288 CDR1P51861 262 aa8.03□□□□□ -1.12
SKP1-213ENST00000524288 MVKQ03426 396 aa8.03□□□□□ -1.12
SKP1-213ENST00000524288 BRDTQ58F21 947 aaPredicted RBP8.03□□□□□ -1.12
SKP1-213ENST00000524288 ACBD5Q5T8D3 534 aaPredicted RBP8.03□□□□□ -1.12
SKP1-213ENST00000524288 CDCA2Q69YH5 1023 aaPredicted RBP8.03□□□□□ -1.12
SKP1-213ENST00000524288 WWC2Q6AWC2 1192 aa8.03□□□□□ -1.12
SKP1-213ENST00000524288 RCSD1Q6JBY9 416 aa8.03□□□□□ -1.12
SKP1-213ENST00000524288 RPTNQ6XPR3 784 aa8.03□□□□□ -1.12
SKP1-213ENST00000524288 ZC3H7AQ8IWR0 971 aaKnown RBP8.03□□□□□ -1.12
SKP1-213ENST00000524288 IFNL3Q8IZI9 196 aa8.03□□□□□ -1.12
SKP1-213ENST00000524288 NLGN2Q8NFZ4 835 aa8.03□□□□□ -1.12
SKP1-213ENST00000524288 DACT3Q96B18 629 aaPredicted RBP8.03□□□□□ -1.12
SKP1-213ENST00000524288 PTCHD1Q96NR3 888 aa8.03□□□□□ -1.12
SKP1-213ENST00000524288 PARD6AQ9NPB6 346 aa8.03□□□□□ -1.12
SKP1-213ENST00000524288 PPARGC1AQ9UBK2 798 aaKnown RBP8.03□□□□□ -1.12
SKP1-213ENST00000524288 COQ6Q9Y2Z9 468 aa8.03□□□□□ -1.12
SKP1-213ENST00000524288 NPHP3-ACAD11A0A0J9YXS1 232 aa8.02□□□□□ -1.13
SKP1-213ENST00000524288 PAMP19021 973 aa8.02□□□□□ -1.13
SKP1-213ENST00000524288 GPR85P60893 370 aa8.02□□□□□ -1.13
SKP1-213ENST00000524288 EEF1DP3Q658K8 133 aa8.02□□□□□ -1.13
SKP1-213ENST00000524288 ZCCHC8Q6NZY4 707 aaKnown RBP8.02□□□□□ -1.13
SKP1-213ENST00000524288 LDHDQ86WU2 507 aa8.02□□□□□ -1.13
SKP1-213ENST00000524288 AHI1Q8N157 1196 aa8.02□□□□□ -1.13
SKP1-213ENST00000524288 RCBTB1Q8NDN9 531 aa8.02□□□□□ -1.13
SKP1-213ENST00000524288 PDLIM7Q9NR12 457 aa8.02□□□□□ -1.13
SKP1-213ENST00000524288 SAMD15Q9P1V8 674 aa8.02□□□□□ -1.13
SKP1-213ENST00000524288 FBXL7Q9UJT9 491 aa8.02□□□□□ -1.13
SKP1-213ENST00000524288 PCDHA2Q9Y5H9 948 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms