RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	MFAP3L	O75121	409 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	LDHC	P07864	332 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	JUND	P17535	347 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	CAPN2	P17655	700 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	GUCY1A2	P33402	732 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	TXLNA	P40222	546 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	BTD	P43251	543 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	HNRNPH2	P55795	449 aa	Known RBP	8.8	□□□□□ -1
SPIDR-223	ENST00000524033	GNG11	P61952	73 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	GSTO1	P78417	241 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	CAP1	Q01518	475 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	PICALM	Q13492	652 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	TRIM29	Q14134	588 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	RTN1	Q16799	776 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	PTPN21	Q16825	1174 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	TEX35	Q5T0J7	233 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	AKNAD1	Q5T1N1	836 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	SLC9C2	Q5TAH2	1124 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	SPATA1	Q5VX52	437 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	DESI1	Q6ICB0	168 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	RAD9B	Q6WBX8	426 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	SRGAP1	Q7Z6B7	1085 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	ANKRD23	Q86SG2	305 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	TRMT44	Q8IYL2	757 aa	Known RBP	8.8	□□□□□ -1
SPIDR-223	ENST00000524033	IFNL3	Q8IZI9	196 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	TXLNB	Q8N3L3	684 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	CCDC51	Q96ER9	411 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	SLC26A6	Q9BXS9	759 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	PARD6B	Q9BYG5	372 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	KRT23	Q9C075	422 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	CNNM2	Q9H8M5	875 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	ANKZF1	Q9H8Y5	726 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	HMX1	Q9NP08	348 aa	Predicted RBP	8.8	□□□□□ -1
SPIDR-223	ENST00000524033	PICK1	Q9NRD5	415 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	SAMSN1	Q9NSI8	373 aa	Known RBP	8.8	□□□□□ -1
SPIDR-223	ENST00000524033	HCST	Q9UBK5	93 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	PCDHB6	Q9Y5E3	794 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	ZHX2	Q9Y6X8	837 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	GAK	O14976	1311 aa		8.8	□□□□□ -1
SPIDR-223	ENST00000524033	IFIT3	O14879	490 aa	Known RBP	8.79	□□□□□ -1
SPIDR-223	ENST00000524033	DEXI	O95424	95 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	ADH1B	P00325	375 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	GNRH1	P01148	92 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	CCDC175	P0C221	793 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	ADK	P55263	362 aa	Known RBP	8.79	□□□□□ -1
SPIDR-223	ENST00000524033	LACTB	P83111	547 aa	Predicted RBP	8.79	□□□□□ -1
SPIDR-223	ENST00000524033	MAP3K10	Q02779	954 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	SMC1A	Q14683	1233 aa	Known RBP	8.79	□□□□□ -1
SPIDR-223	ENST00000524033	MTF1	Q14872	753 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	NR6A1	Q15406	480 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	SEC23A	Q15436	765 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	SLC9C1	Q4G0N8	1177 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	NOL9	Q5SY16	702 aa	Known RBP	8.79	□□□□□ -1
SPIDR-223	ENST00000524033	C17orf99	Q6UX52	265 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	SH3BP5L	Q7L8J4	393 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	RASGRP2	Q7LDG7	609 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	8.79	□□□□□ -1
SPIDR-223	ENST00000524033	TNFRSF25	Q93038	417 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	EXOC4	Q96A65	974 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	ARMC5	Q96C12	935 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	THAP11	Q96EK4	314 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	MYL10	Q9BUA6	226 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	EPC1	Q9H2F5	836 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	DDX4	Q9NQI0	724 aa	Known RBP	8.79	□□□□□ -1
SPIDR-223	ENST00000524033	ZSWIM5	Q9P217	1185 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	LRP2BP	Q9P2M1	347 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	CDC23	Q9UJX2	597 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	CEP131	Q9UPN4	1083 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	KCNH4	Q9UQ05	1017 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	SYNRG	Q9UMZ2	1314 aa		8.79	□□□□□ -1
SPIDR-223	ENST00000524033	ERICH4	A6NGS2	130 aa		8.78	□□□□□ -1
SPIDR-223	ENST00000524033	DDTL	A6NHG4	134 aa	Predicted RBP	8.78	□□□□□ -1
SPIDR-223	ENST00000524033	SOWAHD	A6NJG2	315 aa		8.78	□□□□□ -1
SPIDR-223	ENST00000524033	POLR2D	O15514	142 aa	Known RBP	8.78	□□□□□ -1
SPIDR-223	ENST00000524033	TEX33	O43247	280 aa		8.78	□□□□□ -1
SPIDR-223	ENST00000524033	CTNND1	O60716	968 aa	Known RBP	8.78	□□□□□ -1
SPIDR-223	ENST00000524033	RPS6KA5	O75582	802 aa		8.78	□□□□□ -1
SPIDR-223	ENST00000524033	MBD4	O95243	580 aa		8.78	□□□□□ -1
SPIDR-223	ENST00000524033	PTPRA	P18433	802 aa		8.78	□□□□□ -1
SPIDR-223	ENST00000524033	EN2	P19622	333 aa	Predicted RBP	8.78	□□□□□ -1
SPIDR-223	ENST00000524033	ARHGAP25	P42331	645 aa		8.78	□□□□□ -1
SPIDR-223	ENST00000524033	RHBDL3	P58872	404 aa		8.78	□□□□□ -1
SPIDR-223	ENST00000524033	TUBB4B	P68371	445 aa		8.78	□□□□□ -1
SPIDR-223	ENST00000524033	AMPD2	Q01433	879 aa		8.78	□□□□□ -1
SPIDR-223	ENST00000524033	DPYD	Q12882	1025 aa		8.78	□□□□□ -1
SPIDR-223	ENST00000524033	MOGS	Q13724	837 aa		8.78	□□□□□ -1
SPIDR-223	ENST00000524033	GNL2	Q13823	731 aa	Known RBP	8.78	□□□□□ -1
SPIDR-223	ENST00000524033	KARS	Q15046	597 aa	Known RBP	8.78	□□□□□ -1
SPIDR-223	ENST00000524033	SAFB	Q15424	915 aa	Known RBP eCLIP	8.78	□□□□□ -1
SPIDR-223	ENST00000524033	PKN1	Q16512	942 aa		8.78	□□□□□ -1
SPIDR-223	ENST00000524033	LONRF2	Q1L5Z9	754 aa		8.78	□□□□□ -1
SPIDR-223	ENST00000524033	SPECC1	Q5M775	1068 aa		8.78	□□□□□ -1
SPIDR-223	ENST00000524033	BEND6	Q5SZJ8	279 aa	Predicted RBP	8.78	□□□□□ -1
SPIDR-223	ENST00000524033	LYPD8	Q6UX82	237 aa		8.78	□□□□□ -1
SPIDR-223	ENST00000524033	NFXL1	Q6ZNB6	911 aa		8.78	□□□□□ -1
SPIDR-223	ENST00000524033	USP49	Q70CQ1	688 aa		8.78	□□□□□ -1
SPIDR-223	ENST00000524033	FASTKD5	Q7L8L6	764 aa	Known RBP	8.78	□□□□□ -1
SPIDR-223	ENST00000524033	GRAMD1C	Q8IYS0	662 aa		8.78	□□□□□ -1
SPIDR-223	ENST00000524033	SCYL3	Q8IZE3	742 aa		8.78	□□□□□ -1
SPIDR-223	ENST00000524033	CEP112	Q8N8E3	955 aa		8.78	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms