RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 IRX3P78415 501 aaPredicted RBP7.03□□□□□ -1.28
EFCAB13-213ENST00000523978 KIAA1211LQ6NV74 962 aa7.03□□□□□ -1.28
EFCAB13-213ENST00000523978 SAPCD2Q86UD0 394 aa7.03□□□□□ -1.28
EFCAB13-213ENST00000523978 FAM169BQ8N8A8 192 aa7.03□□□□□ -1.28
EFCAB13-213ENST00000523978 ZNF513Q8N8E2 541 aaPredicted RBP7.03□□□□□ -1.28
EFCAB13-213ENST00000523978 RCC1LQ96I51 464 aaKnown RBP7.03□□□□□ -1.28
EFCAB13-213ENST00000523978 APEX2Q9UBZ4 518 aa7.03□□□□□ -1.28
EFCAB13-213ENST00000523978 CCDC189A1A4V9 331 aa7.02□□□□□ -1.29
EFCAB13-213ENST00000523978 BICDL2A1A5D9 508 aa7.02□□□□□ -1.29
EFCAB13-213ENST00000523978 VDRP11473 427 aa7.02□□□□□ -1.29
EFCAB13-213ENST00000523978 PAMP19021 973 aa7.02□□□□□ -1.29
EFCAB13-213ENST00000523978 MAN1A1P33908 653 aa7.02□□□□□ -1.29
EFCAB13-213ENST00000523978 CASP7P55210 303 aa7.02□□□□□ -1.29
EFCAB13-213ENST00000523978 DLX2Q07687 328 aaPredicted RBP7.02□□□□□ -1.29
EFCAB13-213ENST00000523978 HSP90AA2PQ14568 343 aaPredicted RBP7.02□□□□□ -1.29
EFCAB13-213ENST00000523978 CC2D1BQ5T0F9 858 aaKnown RBP7.02□□□□□ -1.29
EFCAB13-213ENST00000523978 VHLLQ6RSH7 139 aa7.02□□□□□ -1.29
EFCAB13-213ENST00000523978 PRRT2Q7Z6L0 340 aaPredicted RBP7.02□□□□□ -1.29
EFCAB13-213ENST00000523978 B3GNT8Q7Z7M8 397 aa7.02□□□□□ -1.29
EFCAB13-213ENST00000523978 NETO2Q8NC67 525 aa7.02□□□□□ -1.29
EFCAB13-213ENST00000523978 SPATA25Q9BR10 227 aa7.02□□□□□ -1.29
EFCAB13-213ENST00000523978 GEMIN8Q9NWZ8 242 aaKnown RBP7.02□□□□□ -1.29
EFCAB13-213ENST00000523978 NPHP3-ACAD11A0A0J9YXS1 232 aa7.01□□□□□ -1.29
EFCAB13-213ENST00000523978 TCERG1O14776 1098 aaKnown RBP7.01□□□□□ -1.29
EFCAB13-213ENST00000523978 FAM200BP0CF97 657 aa7.01□□□□□ -1.29
EFCAB13-213ENST00000523978 ERCC5P28715 1186 aaPredicted RBP7.01□□□□□ -1.29
EFCAB13-213ENST00000523978 PLEKHG6Q3KR16 790 aa7.01□□□□□ -1.29
EFCAB13-213ENST00000523978 CCDC144BQ3MJ40 725 aa7.01□□□□□ -1.29
EFCAB13-213ENST00000523978 TBC1D10BQ4KMP7 808 aaPredicted RBP7.01□□□□□ -1.29
EFCAB13-213ENST00000523978 HSP90AB3PQ58FF7 597 aa7.01□□□□□ -1.29
EFCAB13-213ENST00000523978 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.01□□□□□ -1.29
EFCAB13-213ENST00000523978 CPLX3Q8WVH0 158 aa7.01□□□□□ -1.29
EFCAB13-213ENST00000523978 PEX11GQ96HA9 241 aa7.01□□□□□ -1.29
EFCAB13-213ENST00000523978 NAP1L4Q99733 375 aaKnown RBP7.01□□□□□ -1.29
EFCAB13-213ENST00000523978 PAGR1Q9BTK6 254 aa7.01□□□□□ -1.29
EFCAB13-213ENST00000523978 TANGO6Q9C0B7 1094 aa7.01□□□□□ -1.29
EFCAB13-213ENST00000523978 SPC25Q9HBM1 224 aa7.01□□□□□ -1.29
EFCAB13-213ENST00000523978 NUDT5Q9UKK9 219 aa7.01□□□□□ -1.29
EFCAB13-213ENST00000523978 AKT3Q9Y243 479 aa7.01□□□□□ -1.29
EFCAB13-213ENST00000523978 SCINQ9Y6U3 715 aa7.01□□□□□ -1.29
EFCAB13-213ENST00000523978 C7orf72A4D263 438 aa7□□□□□ -1.29
EFCAB13-213ENST00000523978 SH3D21A4FU49 640 aa7□□□□□ -1.29
EFCAB13-213ENST00000523978 ANKRD34BA5PLL1 514 aa7□□□□□ -1.29
EFCAB13-213ENST00000523978 PRICKLE3O43900 615 aaPredicted RBP7□□□□□ -1.29
EFCAB13-213ENST00000523978 KCNH1O95259 989 aa7□□□□□ -1.29
EFCAB13-213ENST00000523978 TBX4P57082 545 aa7□□□□□ -1.29
EFCAB13-213ENST00000523978 MTA1Q13330 715 aa7□□□□□ -1.29
EFCAB13-213ENST00000523978 RNF187Q5TA31 235 aaPredicted RBP7□□□□□ -1.29
EFCAB13-213ENST00000523978 MBLAC2Q68D91 279 aa7□□□□□ -1.29
EFCAB13-213ENST00000523978 WWC2Q6AWC2 1192 aa7□□□□□ -1.29
EFCAB13-213ENST00000523978 ANKRD23Q86SG2 305 aa7□□□□□ -1.29
EFCAB13-213ENST00000523978 SMARCC2Q8TAQ2 1214 aa7□□□□□ -1.29
EFCAB13-213ENST00000523978 BDH2Q9BUT1 245 aa7□□□□□ -1.29
EFCAB13-213ENST00000523978 INO80BQ9C086 356 aaPredicted RBP7□□□□□ -1.29
EFCAB13-213ENST00000523978 RSPH9Q9H1X1 276 aaPredicted RBP7□□□□□ -1.29
EFCAB13-213ENST00000523978 CLEC1BQ9P126 229 aa7□□□□□ -1.29
EFCAB13-213ENST00000523978 ABCF2Q9UG63 623 aa7□□□□□ -1.29
EFCAB13-213ENST00000523978 SYNPO2Q9UMS6 1093 aa7□□□□□ -1.29
EFCAB13-213ENST00000523978 TRBV23OR9-2A0A075B6M9 112 aa6.99□□□□□ -1.29
EFCAB13-213ENST00000523978 NPHS1O60500 1241 aa6.99□□□□□ -1.29
EFCAB13-213ENST00000523978 ANP32AP39687 249 aaKnown RBP6.99□□□□□ -1.29
EFCAB13-213ENST00000523978 EVA1CP58658 441 aa6.99□□□□□ -1.29
EFCAB13-213ENST00000523978 NFKB2Q00653 900 aa6.99□□□□□ -1.29
EFCAB13-213ENST00000523978 SCRN1Q12765 414 aa6.99□□□□□ -1.29
EFCAB13-213ENST00000523978 RTP5Q14D33 572 aa6.99□□□□□ -1.29
EFCAB13-213ENST00000523978 NT5DC1Q5TFE4 455 aa6.99□□□□□ -1.29
EFCAB13-213ENST00000523978 NBPF6Q5VWK0 638 aa6.99□□□□□ -1.29
EFCAB13-213ENST00000523978 NBPF5PQ86XG9 351 aaPredicted RBP6.99□□□□□ -1.29
EFCAB13-213ENST00000523978 PDILTQ8N807 584 aa6.99□□□□□ -1.29
EFCAB13-213ENST00000523978 C1orf131Q8NDD1 294 aaKnown RBP6.99□□□□□ -1.29
EFCAB13-213ENST00000523978 USP33Q8TEY7 942 aa6.99□□□□□ -1.29
EFCAB13-213ENST00000523978 NBPF4Q96M43 638 aa6.99□□□□□ -1.29
EFCAB13-213ENST00000523978 NOX5Q96PH1 765 aa6.99□□□□□ -1.29
EFCAB13-213ENST00000523978 PCGF6Q9BYE7 350 aa6.99□□□□□ -1.29
EFCAB13-213ENST00000523978 GPRC5CQ9NQ84 441 aa6.99□□□□□ -1.29
EFCAB13-213ENST00000523978 MAP3K20Q9NYL2 800 aaKnown RBP6.99□□□□□ -1.29
EFCAB13-213ENST00000523978 JAG2Q9Y219 1238 aa6.99□□□□□ -1.29
EFCAB13-213ENST00000523978 EMC9Q9Y3B6 208 aa6.99□□□□□ -1.29
EFCAB13-213ENST00000523978 SIT1Q9Y3P8 196 aa6.99□□□□□ -1.29
EFCAB13-213ENST00000523978 PRC1O43663 620 aa6.98□□□□□ -1.29
EFCAB13-213ENST00000523978 FUCA1P04066 466 aa6.98□□□□□ -1.29
EFCAB13-213ENST00000523978 PLS3P13797 630 aa6.98□□□□□ -1.29
EFCAB13-213ENST00000523978 LMOD3Q0VAK6 560 aa6.98□□□□□ -1.29
EFCAB13-213ENST00000523978 SLC9A5Q14940 896 aa6.98□□□□□ -1.29
EFCAB13-213ENST00000523978 GJC2Q5T442 439 aaPredicted RBP6.98□□□□□ -1.29
EFCAB13-213ENST00000523978 COPS5Q92905 334 aa6.98□□□□□ -1.29
EFCAB13-213ENST00000523978 SEC16BQ96JE7 1060 aa6.98□□□□□ -1.29
EFCAB13-213ENST00000523978 ACBD3Q9H3P7 528 aa6.98□□□□□ -1.29
EFCAB13-213ENST00000523978 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.98□□□□□ -1.29
EFCAB13-213ENST00000523978 COL4A3BPQ9Y5P4 624 aa6.98□□□□□ -1.29
EFCAB13-213ENST00000523978 NTRK1P04629 796 aa6.97□□□□□ -1.29
EFCAB13-213ENST00000523978 CALD1Q05682 793 aaKnown RBP6.97□□□□□ -1.29
EFCAB13-213ENST00000523978 CACNB2Q08289 660 aaPredicted RBP6.97□□□□□ -1.29
EFCAB13-213ENST00000523978 ZRSR2Q15696 482 aaKnown RBP6.97□□□□□ -1.29
EFCAB13-213ENST00000523978 CARFQ8N187 725 aa6.97□□□□□ -1.29
EFCAB13-213ENST00000523978 LSM14AQ8ND56 463 aaKnown RBP6.97□□□□□ -1.29
EFCAB13-213ENST00000523978 BVESQ8NE79 360 aa6.97□□□□□ -1.29
EFCAB13-213ENST00000523978 CPA5Q8WXQ8 436 aa6.97□□□□□ -1.29
EFCAB13-213ENST00000523978 ARMC5Q96C12 935 aa6.97□□□□□ -1.29
EFCAB13-213ENST00000523978 ANAPC16Q96DE5 110 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms