RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 ALG3Q92685 438 aa8.09□□□□□ -1.11
CPNE3-207ENST00000523588 KCNJ15Q99712 375 aa8.09□□□□□ -1.11
CPNE3-207ENST00000523588 SLC6A20Q9NP91 592 aa8.09□□□□□ -1.11
CPNE3-207ENST00000523588 FANCLQ9NW38 375 aa8.09□□□□□ -1.11
CPNE3-207ENST00000523588 SMG5Q9UPR3 1016 aaKnown RBP8.09□□□□□ -1.11
CPNE3-207ENST00000523588 ZNF652Q9Y2D9 606 aa8.09□□□□□ -1.11
CPNE3-207ENST00000523588 NFIBO00712 420 aa8.08□□□□□ -1.12
CPNE3-207ENST00000523588 IRS4O14654 1257 aaPredicted RBP8.08□□□□□ -1.12
CPNE3-207ENST00000523588 RASGRP1O95267 797 aa8.08□□□□□ -1.12
CPNE3-207ENST00000523588 ASMTLO95671 621 aa8.08□□□□□ -1.12
CPNE3-207ENST00000523588 COL6A2P12110 1019 aa8.08□□□□□ -1.12
CPNE3-207ENST00000523588 CHRNA2Q15822 529 aa8.08□□□□□ -1.12
CPNE3-207ENST00000523588 FGD2Q7Z6J4 655 aa8.08□□□□□ -1.12
CPNE3-207ENST00000523588 MILR1Q7Z6M3 343 aa8.08□□□□□ -1.12
CPNE3-207ENST00000523588 HOMER1Q86YM7 354 aa8.08□□□□□ -1.12
CPNE3-207ENST00000523588 PIP4K2CQ8TBX8 421 aa8.08□□□□□ -1.12
CPNE3-207ENST00000523588 TLDC2A0PJX2 215 aa8.07□□□□□ -1.12
CPNE3-207ENST00000523588 ATF2P15336 505 aa8.07□□□□□ -1.12
CPNE3-207ENST00000523588 NAT1P18440 290 aa8.07□□□□□ -1.12
CPNE3-207ENST00000523588 RAP1GAPP47736 663 aa8.07□□□□□ -1.12
CPNE3-207ENST00000523588 TKFCQ3LXA3 575 aa8.07□□□□□ -1.12
CPNE3-207ENST00000523588 CILP2Q8IUL8 1156 aa8.07□□□□□ -1.12
CPNE3-207ENST00000523588 NLGN1Q8N2Q7 840 aa8.07□□□□□ -1.12
CPNE3-207ENST00000523588 SYNPOQ8N3V7 929 aa8.07□□□□□ -1.12
CPNE3-207ENST00000523588 APPBP2Q92624 585 aa8.07□□□□□ -1.12
CPNE3-207ENST00000523588 MAGEB10Q96LZ2 347 aaPredicted RBP8.07□□□□□ -1.12
CPNE3-207ENST00000523588 RNF38Q9H0F5 515 aa8.07□□□□□ -1.12
CPNE3-207ENST00000523588 TCRBV5S2A0A599 114 aa8.06□□□□□ -1.12
CPNE3-207ENST00000523588 TCRBV16S1A1N1A0A5B0 115 aa8.06□□□□□ -1.12
CPNE3-207ENST00000523588 NKRFO15226 690 aaKnown RBP eCLIP8.06□□□□□ -1.12
CPNE3-207ENST00000523588 GNAT1P11488 350 aa8.06□□□□□ -1.12
CPNE3-207ENST00000523588 NCAM1P13591 858 aa8.06□□□□□ -1.12
CPNE3-207ENST00000523588 KCNA6P17658 529 aa8.06□□□□□ -1.12
CPNE3-207ENST00000523588 TARBP2Q15633 366 aaKnown RBP8.06□□□□□ -1.12
CPNE3-207ENST00000523588 CYP4F22Q6NT55 531 aa8.06□□□□□ -1.12
CPNE3-207ENST00000523588 C16orf86Q6ZW13 317 aa8.06□□□□□ -1.12
CPNE3-207ENST00000523588 AMIGO3Q86WK7 504 aa8.06□□□□□ -1.12
CPNE3-207ENST00000523588 MIB1Q86YT6 1006 aa8.06□□□□□ -1.12
CPNE3-207ENST00000523588 TMEFF1Q8IYR6 380 aa8.06□□□□□ -1.12
CPNE3-207ENST00000523588 CPA5Q8WXQ8 436 aa8.06□□□□□ -1.12
CPNE3-207ENST00000523588 SIGLEC10Q96LC7 697 aa8.06□□□□□ -1.12
CPNE3-207ENST00000523588 SMOC1Q9H4F8 434 aa8.06□□□□□ -1.12
CPNE3-207ENST00000523588 EPB41L4AQ9HCS5 686 aaPredicted RBP8.06□□□□□ -1.12
CPNE3-207ENST00000523588 TCRBV5S4A2TA0A5A2 114 aa8.05□□□□□ -1.12
CPNE3-207ENST00000523588 TCAF2A6NFQ2 919 aa8.05□□□□□ -1.12
CPNE3-207ENST00000523588 ENPP3O14638 875 aa8.05□□□□□ -1.12
CPNE3-207ENST00000523588 BUB1BO60566 1050 aaPredicted RBP8.05□□□□□ -1.12
CPNE3-207ENST00000523588 RFPL3O75679 317 aa8.05□□□□□ -1.12
CPNE3-207ENST00000523588 CKMP06732 381 aa8.05□□□□□ -1.12
CPNE3-207ENST00000523588 SRGAP2CP0DJJ0 459 aa8.05□□□□□ -1.12
CPNE3-207ENST00000523588 MC3RP41968 323 aa8.05□□□□□ -1.12
CPNE3-207ENST00000523588 SPIRE1Q08AE8 756 aa8.05□□□□□ -1.12
CPNE3-207ENST00000523588 SSPNQ14714 243 aa8.05□□□□□ -1.12
CPNE3-207ENST00000523588 TCEA2Q15560 299 aa8.05□□□□□ -1.12
CPNE3-207ENST00000523588 PKN1Q16512 942 aa8.05□□□□□ -1.12
CPNE3-207ENST00000523588 C16orf59Q7L2K0 433 aa8.05□□□□□ -1.12
CPNE3-207ENST00000523588 ARRDC4Q8NCT1 418 aa8.05□□□□□ -1.12
CPNE3-207ENST00000523588 UHMK1Q8TAS1 419 aaKnown RBP8.05□□□□□ -1.12
CPNE3-207ENST00000523588 FBXW5Q969U6 566 aa8.05□□□□□ -1.12
CPNE3-207ENST00000523588 MYOTQ9UBF9 498 aa8.05□□□□□ -1.12
CPNE3-207ENST00000523588 PCDHB4Q9Y5E5 795 aa8.05□□□□□ -1.12
CPNE3-207ENST00000523588 KRIT1O00522 736 aa8.04□□□□□ -1.12
CPNE3-207ENST00000523588 CDC45O75419 566 aa8.04□□□□□ -1.12
CPNE3-207ENST00000523588 PYGMP11217 842 aa8.04□□□□□ -1.12
CPNE3-207ENST00000523588 PFKLP17858 780 aa8.04□□□□□ -1.12
CPNE3-207ENST00000523588 CACNB2Q08289 660 aaPredicted RBP8.04□□□□□ -1.12
CPNE3-207ENST00000523588 PABPC4Q13310 644 aaKnown RBP eCLIP8.04□□□□□ -1.12
CPNE3-207ENST00000523588 KCNA10Q16322 511 aa8.04□□□□□ -1.12
CPNE3-207ENST00000523588 FAM126BQ8IXS8 530 aa8.04□□□□□ -1.12
CPNE3-207ENST00000523588 PHOSPHO1Q8TCT1 267 aa8.04□□□□□ -1.12
CPNE3-207ENST00000523588 SH3RF2Q8TEC5 729 aa8.04□□□□□ -1.12
CPNE3-207ENST00000523588 ASH2LQ9UBL3 628 aa8.04□□□□□ -1.12
CPNE3-207ENST00000523588 CBLCQ9ULV8 474 aa8.04□□□□□ -1.12
CPNE3-207ENST00000523588 CD2APQ9Y5K6 639 aa8.04□□□□□ -1.12
CPNE3-207ENST00000523588 NPIPB6E9PJ23 425 aa8.03□□□□□ -1.12
CPNE3-207ENST00000523588 SLC27A2O14975 620 aa8.03□□□□□ -1.12
CPNE3-207ENST00000523588 DNAJC8O75937 253 aaPredicted RBP8.03□□□□□ -1.12
CPNE3-207ENST00000523588 SDSP20132 328 aa8.03□□□□□ -1.12
CPNE3-207ENST00000523588 LINC00310P59036 64 aa8.03□□□□□ -1.12
CPNE3-207ENST00000523588 ABHD17CQ6PCB6 329 aa8.03□□□□□ -1.12
CPNE3-207ENST00000523588 ZC3H7AQ8IWR0 971 aaKnown RBP8.03□□□□□ -1.12
CPNE3-207ENST00000523588 RBM12BQ8IXT5 1001 aaKnown RBP8.03□□□□□ -1.12
CPNE3-207ENST00000523588 CLEC4DQ8WXI8 215 aa8.03□□□□□ -1.12
CPNE3-207ENST00000523588 DSEQ9UL01 958 aa8.03□□□□□ -1.12
CPNE3-207ENST00000523588 TELO2Q9Y4R8 837 aa8.03□□□□□ -1.12
CPNE3-207ENST00000523588 IRAK3Q9Y616 596 aa8.03□□□□□ -1.12
CPNE3-207ENST00000523588 CCDC66A2RUB6 948 aa8.02□□□□□ -1.13
CPNE3-207ENST00000523588 MAFKO60675 156 aa8.02□□□□□ -1.13
CPNE3-207ENST00000523588 AMY2AP04746 511 aa8.02□□□□□ -1.13
CPNE3-207ENST00000523588 C8BP07358 591 aa8.02□□□□□ -1.13
CPNE3-207ENST00000523588 AMY2BP19961 511 aa8.02□□□□□ -1.13
CPNE3-207ENST00000523588 C21orf62-AS1Q17RA5 79 aa8.02□□□□□ -1.13
CPNE3-207ENST00000523588 ETV3LQ6ZN32 361 aa8.02□□□□□ -1.13
CPNE3-207ENST00000523588 KIAA0907Q7Z7F0 614 aaPredicted RBP8.02□□□□□ -1.13
CPNE3-207ENST00000523588 B3GNT8Q7Z7M8 397 aa8.02□□□□□ -1.13
CPNE3-207ENST00000523588 ANKLE2Q86XL3 938 aa8.02□□□□□ -1.13
CPNE3-207ENST00000523588 KRTAP19-1Q8IUB9 90 aa8.02□□□□□ -1.13
CPNE3-207ENST00000523588 FAM26EQ8N5C1 309 aa8.02□□□□□ -1.13
CPNE3-207ENST00000523588 PANK1Q8TE04 598 aa8.02□□□□□ -1.13
CPNE3-207ENST00000523588 KRTAP4-12Q9BQ66 201 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms