RNA–Protein interactions for RNA: ENST00000523543.1

CDK16-221, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-221ENST00000523543 CEP131Q9UPN4 1083 aa12.7□□□□□ -0.38
CDK16-221ENST00000523543 DOCK3Q8IZD9 2030 aa12.7□□□□□ -0.38
CDK16-221ENST00000523543 RBM47A0AV96 593 aaKnown RBP12.69□□□□□ -0.38
CDK16-221ENST00000523543 LAD1O00515 517 aa12.69□□□□□ -0.38
CDK16-221ENST00000523543 TBX3O15119 743 aa12.69□□□□□ -0.38
CDK16-221ENST00000523543 MSH4O15457 936 aa12.69□□□□□ -0.38
CDK16-221ENST00000523543 ADCY3O60266 1144 aa12.69□□□□□ -0.38
CDK16-221ENST00000523543 HMGCRP04035 888 aa12.69□□□□□ -0.38
CDK16-221ENST00000523543 ARP10275 920 aa12.69□□□□□ -0.38
CDK16-221ENST00000523543 TGFB3P10600 412 aa12.69□□□□□ -0.38
CDK16-221ENST00000523543 CYP2C19P33261 490 aa12.69□□□□□ -0.38
CDK16-221ENST00000523543 LBX1P52954 281 aa12.69□□□□□ -0.38
CDK16-221ENST00000523543 PTGDRQ13258 359 aa12.69□□□□□ -0.38
CDK16-221ENST00000523543 ACVR2BQ13705 512 aa12.69□□□□□ -0.38
CDK16-221ENST00000523543 SLC39A14Q15043 492 aa12.69□□□□□ -0.38
CDK16-221ENST00000523543 CALCRLQ16602 461 aa12.69□□□□□ -0.38
CDK16-221ENST00000523543 MFSD14CQ5VZR4 134 aa12.69□□□□□ -0.38
CDK16-221ENST00000523543 TAPT1Q6NXT6 567 aa12.69□□□□□ -0.38
CDK16-221ENST00000523543 SLAIN1Q8ND83 568 aa12.69□□□□□ -0.38
CDK16-221ENST00000523543 RAET1EQ8TD07 263 aa12.69□□□□□ -0.38
CDK16-221ENST00000523543 HAS1Q92839 578 aa12.69□□□□□ -0.38
CDK16-221ENST00000523543 FAM20AQ96MK3 541 aa12.69□□□□□ -0.38
CDK16-221ENST00000523543 AGO4Q9HCK5 861 aaKnown RBP12.69□□□□□ -0.38
CDK16-221ENST00000523543 TFIP11Q9UBB9 837 aaKnown RBP12.69□□□□□ -0.38
CDK16-221ENST00000523543 CNPY2Q9Y2B0 182 aa12.69□□□□□ -0.38
CDK16-221ENST00000523543 CASP8AP2Q9UKL3 1982 aa12.69□□□□□ -0.38
CDK16-221ENST00000523543 MYH7BA7E2Y1 1941 aa12.68□□□□□ -0.38
CDK16-221ENST00000523543 BAG4O95429 457 aaKnown RBP12.68□□□□□ -0.38
CDK16-221ENST00000523543 OR52Z1P0C646 297 aa12.68□□□□□ -0.38
CDK16-221ENST00000523543 ZNF865P0CJ78 1059 aaPredicted RBP12.68□□□□□ -0.38
CDK16-221ENST00000523543 CYBAP13498 195 aa12.68□□□□□ -0.38
CDK16-221ENST00000523543 ELNP15502 786 aa12.68□□□□□ -0.38
CDK16-221ENST00000523543 KCNA2P16389 499 aa12.68□□□□□ -0.38
CDK16-221ENST00000523543 PRPHP41219 470 aa12.68□□□□□ -0.38
CDK16-221ENST00000523543 CEBPZQ03701 1054 aaKnown RBP12.68□□□□□ -0.38
CDK16-221ENST00000523543 MAP3K21Q5TCX8 1036 aa12.68□□□□□ -0.38
CDK16-221ENST00000523543 ARL6IP4Q66PJ3 421 aaKnown RBP12.68□□□□□ -0.38
CDK16-221ENST00000523543 CCDC62Q6P9F0 684 aa12.68□□□□□ -0.38
CDK16-221ENST00000523543 KCNV1Q6PIU1 500 aa12.68□□□□□ -0.38
CDK16-221ENST00000523543 SEPT14Q6ZU15 432 aa12.68□□□□□ -0.38
CDK16-221ENST00000523543 EEPD1Q7L9B9 569 aa12.68□□□□□ -0.38
CDK16-221ENST00000523543 CTU1Q7Z7A3 348 aaKnown RBP12.68□□□□□ -0.38
CDK16-221ENST00000523543 KCNG4Q8TDN1 519 aa12.68□□□□□ -0.38
CDK16-221ENST00000523543 SCFD2Q8WU76 684 aa12.68□□□□□ -0.38
CDK16-221ENST00000523543 LEO1Q8WVC0 666 aaPredicted RBP12.68□□□□□ -0.38
CDK16-221ENST00000523543 SLC5A5Q92911 643 aa12.68□□□□□ -0.38
CDK16-221ENST00000523543 SENP7Q9BQF6 1050 aa12.68□□□□□ -0.38
CDK16-221ENST00000523543 RCOR1Q9UKL0 485 aa12.68□□□□□ -0.38
CDK16-221ENST00000523543 PTPN22Q9Y2R2 807 aa12.68□□□□□ -0.38
CDK16-221ENST00000523543 PTCH2Q9Y6C5 1203 aa12.68□□□□□ -0.38
CDK16-221ENST00000523543 ZNFX1Q9P2E3 1918 aaKnown RBP12.67□□□□□ -0.38
CDK16-221ENST00000523543 IPO5O00410 1097 aaKnown RBP12.67□□□□□ -0.38
CDK16-221ENST00000523543 PSMD10O75832 226 aa12.67□□□□□ -0.38
CDK16-221ENST00000523543 ARIH2O95376 493 aa12.67□□□□□ -0.38
CDK16-221ENST00000523543 NCLP19338 710 aaKnown RBP12.67□□□□□ -0.38
CDK16-221ENST00000523543 UBA1P22314 1058 aaKnown RBP12.67□□□□□ -0.38
CDK16-221ENST00000523543 SP2Q02086 613 aa12.67□□□□□ -0.38
CDK16-221ENST00000523543 ITGB3BPQ13352 177 aaPredicted RBP12.67□□□□□ -0.38
CDK16-221ENST00000523543 STK38Q15208 465 aa12.67□□□□□ -0.38
CDK16-221ENST00000523543 SLFN12Q8IYM2 578 aa12.67□□□□□ -0.38
CDK16-221ENST00000523543 TRPV1Q8NER1 839 aa12.67□□□□□ -0.38
CDK16-221ENST00000523543 RIT2Q99578 217 aa12.67□□□□□ -0.38
CDK16-221ENST00000523543 ZNF577Q9BSK1 485 aa12.67□□□□□ -0.38
CDK16-221ENST00000523543 SCAND2PQ9GZW5 306 aaPredicted RBP12.67□□□□□ -0.38
CDK16-221ENST00000523543 PDGFCQ9NRA1 345 aa12.67□□□□□ -0.38
CDK16-221ENST00000523543 DDX41Q9UJV9 622 aaKnown RBP12.67□□□□□ -0.38
CDK16-221ENST00000523543 ZHX1Q9UKY1 873 aaPredicted RBP12.67□□□□□ -0.38
CDK16-221ENST00000523543 MRVI1Q9Y6F6 885 aa12.67□□□□□ -0.38
CDK16-221ENST00000523543 PLXNA1Q9UIW2 1896 aa12.67□□□□□ -0.38
CDK16-221ENST00000523543 NFASCO94856 1347 aa12.66□□□□□ -0.38
CDK16-221ENST00000523543 SPTLC2O15270 562 aa12.66□□□□□ -0.38
CDK16-221ENST00000523543 DHX15O43143 795 aaKnown RBP12.66□□□□□ -0.38
CDK16-221ENST00000523543 ATP9AO75110 1047 aa12.66□□□□□ -0.38
CDK16-221ENST00000523543 PPP6R2O75170 966 aa12.66□□□□□ -0.38
CDK16-221ENST00000523543 GRK4P32298 578 aa12.66□□□□□ -0.38
CDK16-221ENST00000523543 FXR2P51116 673 aaKnown RBP eCLIP12.66□□□□□ -0.38
CDK16-221ENST00000523543 CACNB2Q08289 660 aaPredicted RBP12.66□□□□□ -0.38
CDK16-221ENST00000523543 TRIM32Q13049 653 aa12.66□□□□□ -0.38
CDK16-221ENST00000523543 TTLL4Q14679 1199 aa12.66□□□□□ -0.38
CDK16-221ENST00000523543 IL17AQ16552 155 aa12.66□□□□□ -0.38
CDK16-221ENST00000523543 PRAMEF19Q5SWL8 479 aa12.66□□□□□ -0.38
CDK16-221ENST00000523543 IQSEC1Q6DN90 963 aa12.66□□□□□ -0.38
CDK16-221ENST00000523543 B3GNT9Q6UX72 402 aa12.66□□□□□ -0.38
CDK16-221ENST00000523543 TMEM87AQ8NBN3 555 aa12.66□□□□□ -0.38
CDK16-221ENST00000523543 FERMT2Q96AC1 680 aa12.66□□□□□ -0.38
CDK16-221ENST00000523543 PRDM10Q9NQV6 1147 aa12.66□□□□□ -0.38
CDK16-221ENST00000523543 FBXO2Q9UK22 296 aaPredicted RBP12.66□□□□□ -0.38
CDK16-221ENST00000523543 VAV3Q9UKW4 847 aa12.66□□□□□ -0.38
CDK16-221ENST00000523543 SRPRBQ9Y5M8 271 aaKnown RBP12.66□□□□□ -0.38
CDK16-221ENST00000523543 ELP1O95163 1332 aa12.65□□□□□ -0.38
CDK16-221ENST00000523543 NKRFO15226 690 aaKnown RBP eCLIP12.65□□□□□ -0.38
CDK16-221ENST00000523543 INHAP05111 366 aa12.65□□□□□ -0.38
CDK16-221ENST00000523543 PRKAR2AP13861 404 aaKnown RBP12.65□□□□□ -0.38
CDK16-221ENST00000523543 MARCKSP29966 332 aaPredicted RBP12.65□□□□□ -0.38
CDK16-221ENST00000523543 ADCYAP1R1P41586 468 aa12.65□□□□□ -0.38
CDK16-221ENST00000523543 SPIRE1Q08AE8 756 aa12.65□□□□□ -0.38
CDK16-221ENST00000523543 PPP2R5CQ13362 524 aa12.65□□□□□ -0.38
CDK16-221ENST00000523543 NEDD9Q14511 834 aa12.65□□□□□ -0.38
CDK16-221ENST00000523543 PKN2Q16513 984 aaKnown RBP12.65□□□□□ -0.38
CDK16-221ENST00000523543 CCDC144BQ3MJ40 725 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms