RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 PARVGQ9HBI0 331 aa14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 ADD3Q9UEY8 706 aaKnown RBP14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 NWD1Q149M9 1564 aa14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 A0A1W2PRG0 241 aa14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 POTEB3A0JP26 581 aa14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 POTECB2RU33 542 aa14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 H2AFZP0C0S5 128 aa14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 MTERF2Q49AM1 385 aa14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 POTEBQ6S5H4 581 aa14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 H2AFVQ71UI9 128 aa14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 HDXQ7Z353 690 aa14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 DEFB132Q7Z7B7 95 aa14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 NAP1L3Q99457 506 aaPredicted RBP14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 ZNRF3Q9ULT6 936 aa14.35□□□□□ -0.11
PCDHGB1-201ENST00000523390 ATP2A1O14983 1001 aa14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 CCDC91Q7Z6B0 441 aa14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 DAAM2Q86T65 1068 aa14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 TRIM58Q8NG06 486 aa14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 ATRIPQ8WXE1 791 aa14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 RMDN3Q96TC7 470 aa14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 CCDC77Q9BR77 488 aa14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 C1orf112Q9NSG2 853 aa14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 ATP2C1P98194 919 aaPredicted RBP14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 R3HDM1Q15032 1099 aaKnown RBP14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 EZH2Q15910 746 aaKnown RBP14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 USP49Q70CQ1 688 aa14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 UBLCP1Q8WVY7 318 aaPredicted RBP14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 SPZ1Q9BXG8 430 aa14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 POLLQ9UGP5 575 aa14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 AGTPBP1Q9UPW5 1226 aa14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 IREB2P48200 963 aaKnown RBP14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 ZNF543Q08ER8 600 aa14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 CFAP221Q4G0U5 840 aa14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 ACRBPQ8NEB7 543 aa14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 HERC5Q9UII4 1024 aaKnown RBP14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 C3P01024 1663 aa14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 GPR75-ASB3A0A0A6YYF3 556 aa14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 PAIP2Q9BPZ3 127 aaKnown RBP14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 KMT5AQ9NQR1 393 aa14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 ST7Q9NRC1 585 aa14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 FBXO2Q9UK22 296 aaPredicted RBP14.34□□□□□ -0.11
PCDHGB1-201ENST00000523390 SOWAHDA6NJG2 315 aa14.33□□□□□ -0.11
PCDHGB1-201ENST00000523390 CCND2P30279 289 aa14.33□□□□□ -0.11
PCDHGB1-201ENST00000523390 PSMC2P35998 433 aaKnown RBP14.33□□□□□ -0.11
PCDHGB1-201ENST00000523390 RASA3Q14644 834 aa14.33□□□□□ -0.11
PCDHGB1-201ENST00000523390 FAM160B1Q5W0V3 765 aa14.33□□□□□ -0.11
PCDHGB1-201ENST00000523390 KCNB2Q92953 911 aa14.33□□□□□ -0.11
PCDHGB1-201ENST00000523390 SLC5A4Q9NY91 659 aa14.33□□□□□ -0.11
PCDHGB1-201ENST00000523390 OGFRQ9NZT2 677 aa14.33□□□□□ -0.11
PCDHGB1-201ENST00000523390 BAZ2BQ9UIF8 2168 aaKnown RBP14.33□□□□□ -0.12
PCDHGB1-201ENST00000523390 H0YCG3 227 aa14.33□□□□□ -0.12
PCDHGB1-201ENST00000523390 NDUFB10O96000 172 aa14.33□□□□□ -0.12
PCDHGB1-201ENST00000523390 PRCPP42785 496 aa14.33□□□□□ -0.12
PCDHGB1-201ENST00000523390 C16orf86Q6ZW13 317 aa14.33□□□□□ -0.12
PCDHGB1-201ENST00000523390 SLC35F6Q8N357 371 aa14.33□□□□□ -0.12
PCDHGB1-201ENST00000523390 CDHR1Q96JP9 859 aa14.33□□□□□ -0.12
PCDHGB1-201ENST00000523390 PHF20Q9BVI0 1012 aa14.33□□□□□ -0.12
PCDHGB1-201ENST00000523390 N4BP1O75113 896 aaKnown RBP14.33□□□□□ -0.12
PCDHGB1-201ENST00000523390 LRRN2O75325 713 aa14.33□□□□□ -0.12
PCDHGB1-201ENST00000523390 STAT3P40763 770 aa14.33□□□□□ -0.12
PCDHGB1-201ENST00000523390 CCNA1P78396 465 aa14.33□□□□□ -0.12
PCDHGB1-201ENST00000523390 MYL7Q01449 175 aa14.33□□□□□ -0.12
PCDHGB1-201ENST00000523390 RASSF7Q02833 373 aa14.33□□□□□ -0.12
PCDHGB1-201ENST00000523390 HHIPL2Q6UWX4 724 aa14.33□□□□□ -0.12
PCDHGB1-201ENST00000523390 RIOK1Q9BRS2 568 aaKnown RBP14.33□□□□□ -0.12
PCDHGB1-201ENST00000523390 INO80B-WBP1J3KQ70 363 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 KCNK3O14649 394 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 ENC1O14682 589 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 AFPP02771 609 aaKnown RBP14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 CAPN2P17655 700 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 CNGA1P29973 690 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 SLC15A2Q16348 729 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 TCP11X2Q5H9J9 407 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 SNRNP48Q6IEG0 339 aaKnown RBP14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 PDXDC2PQ6P474 469 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 UNC13DQ70J99 1090 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 ARMC9Q7Z3E5 817 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 INO80BQ9C086 356 aaPredicted RBP14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 NDST4Q9H3R1 872 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 POTEFA5A3E0 1075 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 POTEIP0CG38 1075 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 MAP3K9P80192 1104 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 POTEGQ6S5H5 508 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 POTEEQ6S8J3 1075 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 ADGRA1Q86SQ6 560 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 SYCE1Q8N0S2 351 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 RNF146Q9NTX7 359 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 RNF181Q9P0P0 153 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 AMFRQ9UKV5 643 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 ABCB11O95342 1321 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 ZEB2O60315 1214 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 SLC8A3P57103 927 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 CYP27A1Q02318 531 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 TROAPQ12815 778 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 PPP1R18Q6NYC8 613 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 METTL16Q86W50 562 aaKnown RBP14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 RNF169Q8NCN4 708 aa14.32□□□□□ -0.12
PCDHGB1-201ENST00000523390 HINFPQ9BQA5 517 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms