RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 MLXIPQ9HAP2 919 aa18.68■□□□□ 0.58
CLN8-206ENST00000523237 BRPF3Q9ULD4 1205 aa18.68■□□□□ 0.58
CLN8-206ENST00000523237 DOCK5Q9H7D0 1870 aa18.67■□□□□ 0.58
CLN8-206ENST00000523237 PITPNM1O00562 1244 aa18.67■□□□□ 0.58
CLN8-206ENST00000523237 SORBS3O60504 671 aa18.67■□□□□ 0.58
CLN8-206ENST00000523237 PPFIA4O75335 1185 aa18.67■□□□□ 0.58
CLN8-206ENST00000523237 F2P00734 622 aa18.67■□□□□ 0.58
CLN8-206ENST00000523237 PFKMP08237 780 aa18.67■□□□□ 0.58
CLN8-206ENST00000523237 HOXD8P13378 290 aaPredicted RBP18.67■□□□□ 0.58
CLN8-206ENST00000523237 ICAM3P32942 547 aa18.67■□□□□ 0.58
CLN8-206ENST00000523237 HSPA4P34932 840 aa18.67■□□□□ 0.58
CLN8-206ENST00000523237 PSEN2P49810 448 aa18.67■□□□□ 0.58
CLN8-206ENST00000523237 BFSP2Q13515 415 aa18.67■□□□□ 0.58
CLN8-206ENST00000523237 PTGISQ16647 500 aa18.67■□□□□ 0.58
CLN8-206ENST00000523237 HSDL1Q3SXM5 330 aa18.67■□□□□ 0.58
CLN8-206ENST00000523237 PCNX4Q63HM2 1172 aa18.67■□□□□ 0.58
CLN8-206ENST00000523237 CCDC155Q8N6L0 562 aa18.67■□□□□ 0.58
CLN8-206ENST00000523237 C7orf31Q8N865 590 aa18.67■□□□□ 0.58
CLN8-206ENST00000523237 RETREG2Q8NC44 543 aa18.67■□□□□ 0.58
CLN8-206ENST00000523237 GPKOWQ92917 476 aaPredicted RBP eCLIP18.67■□□□□ 0.58
CLN8-206ENST00000523237 KCNB2Q92953 911 aa18.67■□□□□ 0.58
CLN8-206ENST00000523237 GUCD1Q96NT3 240 aa18.67■□□□□ 0.58
CLN8-206ENST00000523237 SEMA6BQ9H3T3 888 aa18.67■□□□□ 0.58
CLN8-206ENST00000523237 RTEL1Q9NZ71 1219 aa18.67■□□□□ 0.58
CLN8-206ENST00000523237 TRIP12Q14669 1992 aaPredicted RBP18.67■□□□□ 0.58
CLN8-206ENST00000523237 KLF18A0A0U1RQI7 1052 aa18.66■□□□□ 0.58
CLN8-206ENST00000523237 FIBPO43427 364 aa18.66■□□□□ 0.58
CLN8-206ENST00000523237 ZNF286BP0CG31 522 aa18.66■□□□□ 0.58
CLN8-206ENST00000523237 DNAJB2P25686 324 aa18.66■□□□□ 0.58
CLN8-206ENST00000523237 RCAN1P53805 252 aa18.66■□□□□ 0.58
CLN8-206ENST00000523237 NEDD9Q14511 834 aa18.66■□□□□ 0.58
CLN8-206ENST00000523237 MFSD10Q14728 455 aa18.66■□□□□ 0.58
CLN8-206ENST00000523237 OTOP2Q7RTS6 562 aa18.66■□□□□ 0.58
CLN8-206ENST00000523237 HEATR3Q7Z4Q2 680 aa18.66■□□□□ 0.58
CLN8-206ENST00000523237 ALG1Q9BT22 464 aa18.66■□□□□ 0.58
CLN8-206ENST00000523237 CNTNAP5Q8WYK1 1306 aa18.66■□□□□ 0.58
CLN8-206ENST00000523237 GOLGA8AA7E2F4 631 aa18.65■□□□□ 0.58
CLN8-206ENST00000523237 GOLGA8BA8MQT2 603 aa18.65■□□□□ 0.58
CLN8-206ENST00000523237 SPATA31C2B4DYI2 1134 aa18.65■□□□□ 0.58
CLN8-206ENST00000523237 HAS3O00219 553 aa18.65■□□□□ 0.58
CLN8-206ENST00000523237 RFC2P35250 354 aa18.65■□□□□ 0.58
CLN8-206ENST00000523237 KIAA0753Q2KHM9 967 aa18.65■□□□□ 0.58
CLN8-206ENST00000523237 GDF6Q6KF10 455 aaPredicted RBP18.65■□□□□ 0.58
CLN8-206ENST00000523237 NLRX1Q86UT6 975 aa18.65■□□□□ 0.58
CLN8-206ENST00000523237 JAKMIP1Q96N16 626 aaKnown RBP18.65■□□□□ 0.58
CLN8-206ENST00000523237 TTYH1Q9H313 450 aaPredicted RBP18.65■□□□□ 0.58
CLN8-206ENST00000523237 HDAC6Q9UBN7 1215 aa18.65■□□□□ 0.58
CLN8-206ENST00000523237 GTF2IRD1Q9UHL9 959 aa18.65■□□□□ 0.58
CLN8-206ENST00000523237 SNX14Q9Y5W7 946 aa18.65■□□□□ 0.58
CLN8-206ENST00000523237 GBF1Q92538 1859 aa18.65■□□□□ 0.58
CLN8-206ENST00000523237 COL6A3P12111 3177 aa18.65■□□□□ 0.58
CLN8-206ENST00000523237 SPDYE3A6NKU9 549 aa18.64■□□□□ 0.57
CLN8-206ENST00000523237 NOP56O00567 594 aaKnown RBP18.64■□□□□ 0.57
CLN8-206ENST00000523237 IQCF3P0C7M6 154 aa18.64■□□□□ 0.57
CLN8-206ENST00000523237 BLOC1S2Q6QNY1 142 aa18.64■□□□□ 0.57
CLN8-206ENST00000523237 DEFB128Q7Z7B8 93 aa18.64■□□□□ 0.57
CLN8-206ENST00000523237 CAGE1Q8TC20 777 aa18.64■□□□□ 0.57
CLN8-206ENST00000523237 CXXC1Q9P0U4 656 aaPredicted RBP18.64■□□□□ 0.57
CLN8-206ENST00000523237 NAP1L2Q9ULW6 460 aaPredicted RBP18.64■□□□□ 0.57
CLN8-206ENST00000523237 hCG_1984214I3L0E3 225 aa18.63■□□□□ 0.57
CLN8-206ENST00000523237 CPA1P15085 419 aa18.63■□□□□ 0.57
CLN8-206ENST00000523237 NAPAP54920 295 aa18.63■□□□□ 0.57
CLN8-206ENST00000523237 FUT2Q10981 343 aa18.63■□□□□ 0.57
CLN8-206ENST00000523237 SEMA3FQ13275 785 aa18.63■□□□□ 0.57
CLN8-206ENST00000523237 UBE2SQ16763 222 aa18.63■□□□□ 0.57
CLN8-206ENST00000523237 WWC2Q6AWC2 1192 aa18.63■□□□□ 0.57
CLN8-206ENST00000523237 METTL7BQ6UX53 244 aa18.63■□□□□ 0.57
CLN8-206ENST00000523237 Q6ZUG5 572 aa18.63■□□□□ 0.57
CLN8-206ENST00000523237 CYFIP1Q7L576 1253 aa18.63■□□□□ 0.57
CLN8-206ENST00000523237 ZNF713Q8N859 430 aaPredicted RBP18.63■□□□□ 0.57
CLN8-206ENST00000523237 TIFAQ96CG3 184 aa18.63■□□□□ 0.57
CLN8-206ENST00000523237 CTAGE1Q96RT6 745 aa18.63■□□□□ 0.57
CLN8-206ENST00000523237 CDX2Q99626 313 aaPredicted RBP18.63■□□□□ 0.57
CLN8-206ENST00000523237 SENP7Q9BQF6 1050 aa18.63■□□□□ 0.57
CLN8-206ENST00000523237 PBX4Q9BYU1 374 aa18.63■□□□□ 0.57
CLN8-206ENST00000523237 EHMT1Q9H9B1 1298 aa18.63■□□□□ 0.57
CLN8-206ENST00000523237 V9GY48 417 aaPredicted RBP18.63■□□□□ 0.57
CLN8-206ENST00000523237 CCDC196A0A1B0GTZ2 297 aa18.62■□□□□ 0.57
CLN8-206ENST00000523237 ZBBXA8MT70 800 aa18.62■□□□□ 0.57
CLN8-206ENST00000523237 GRXCR1A8MXD5 290 aa18.62■□□□□ 0.57
CLN8-206ENST00000523237 ACTN1P12814 892 aa18.62■□□□□ 0.57
CLN8-206ENST00000523237 PSMA5P28066 241 aa18.62■□□□□ 0.57
CLN8-206ENST00000523237 METAP2P50579 478 aaKnown RBP eCLIP18.62■□□□□ 0.57
CLN8-206ENST00000523237 PPP1R18Q6NYC8 613 aa18.62■□□□□ 0.57
CLN8-206ENST00000523237 TEX2Q8IWB9 1127 aa18.62■□□□□ 0.57
CLN8-206ENST00000523237 GIMAP8Q8ND71 665 aaPredicted RBP18.62■□□□□ 0.57
CLN8-206ENST00000523237 SLC17A8Q8NDX2 589 aa18.62■□□□□ 0.57
CLN8-206ENST00000523237 AFAP1L1Q8TED9 768 aa18.62■□□□□ 0.57
CLN8-206ENST00000523237 BRF1Q92994 677 aa18.62■□□□□ 0.57
CLN8-206ENST00000523237 GPRASP2Q96D09 838 aa18.62■□□□□ 0.57
CLN8-206ENST00000523237 VWCEQ96DN2 955 aa18.62■□□□□ 0.57
CLN8-206ENST00000523237 CDHR1Q96JP9 859 aa18.62■□□□□ 0.57
CLN8-206ENST00000523237 C16orf70Q9BSU1 422 aa18.62■□□□□ 0.57
CLN8-206ENST00000523237 USP26Q9BXU7 913 aa18.62■□□□□ 0.57
CLN8-206ENST00000523237 BCAS3Q9H6U6 928 aa18.62■□□□□ 0.57
CLN8-206ENST00000523237 PCDHA6Q9UN73 950 aa18.62■□□□□ 0.57
CLN8-206ENST00000523237 PCDHA8Q9Y5H6 950 aa18.62■□□□□ 0.57
CLN8-206ENST00000523237 SLC4A7Q9Y6M7 1214 aa18.62■□□□□ 0.57
CLN8-206ENST00000523237 H3BRB1 525 aa18.61■□□□□ 0.57
CLN8-206ENST00000523237 EPB41L2O43491 1005 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms