RNA–Protein interactions for RNA: ENST00000523227.5

CSGALNACT1-212, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 633 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-212ENST00000523227 LAMA2P24043 3122 aaKnown RBP7.38□□□□□ -1.23
CSGALNACT1-212ENST00000523227 SCN10AQ9Y5Y9 1956 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 GRIN2DO15399 1336 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 KIF28PB7ZC32 967 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 B4GALT4O60513 344 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 EIF3JO75822 258 aaKnown RBP7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 CFBP00751 764 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 GH1P01241 217 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 PFKMP08237 780 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 MYL3P08590 195 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 ACTN1P12814 892 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 CSF2RAP15509 400 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 KIF5BP33176 963 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 HSD17B4P51659 736 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 PSMC6P62333 389 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 PTPN11Q06124 597 aaPredicted RBP7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 CCDC85BQ15834 202 aaPredicted RBP7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 TMEM67Q5HYA8 995 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 TMEM63BQ5T3F8 832 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 NFRKBQ6P4R8 1299 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 CASC1Q6TDU7 716 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 STOX1Q6ZVD7 989 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 CENPQQ7L2Z9 268 aaPredicted RBP7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 MB21D2Q8IYB1 491 aaPredicted RBP7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 TMTC2Q8N394 836 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 TBC1D5Q92609 795 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 PPP1R12CQ9BZL4 782 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 ALDH8A1Q9H2A2 487 aaPredicted RBP7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 HIPK3Q9H422 1215 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 PXMP2Q9NR77 195 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 COL20A1Q9P218 1284 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 PCDHA11Q9Y5I1 949 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 PCDHA1Q9Y5I3 950 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 SLC4A7Q9Y6M7 1214 aa7.37□□□□□ -1.23
CSGALNACT1-212ENST00000523227 PNMA6FA0A0J9YX94 578 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 OPLAHO14841 1288 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 DDAH1O94760 285 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 NR3C2P08235 984 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 EIF2AK2P19525 551 aaKnown RBP7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 POU3F3P20264 500 aaPredicted RBP7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 CASTP20810 708 aaKnown RBP7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 PTGS1P23219 599 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 SMARCA1P28370 1054 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 CYP2C18P33260 490 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 MCM5P33992 734 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 ANTXR2P58335 489 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 SKIV2LQ15477 1246 aaKnown RBP7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 BMP2KLQ5H9B9 411 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 CCDC62Q6P9F0 684 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 KCNV1Q6PIU1 500 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 SEPT14Q6ZU15 432 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 C16orf59Q7L2K0 433 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 CHST3Q7LGC8 479 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 HOMER1Q86YM7 354 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 USP38Q8NB14 1042 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 CTCFLQ8NI51 663 aaPredicted RBP7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 IGDCC4Q8TDY8 1250 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 PTCD2Q8WV60 388 aaKnown RBP7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 EMID1Q96A84 441 aaPredicted RBP7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 TMEM87BQ96K49 555 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 PCMTD1Q96MG8 357 aaPredicted RBP7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 PIGSQ96S52 555 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 LZTS2Q9BRK4 669 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 PDCD2LQ9BRP1 358 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 ESYT1Q9BSJ8 1104 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 NOC4LQ9BVI4 516 aaKnown RBP7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 LSG1Q9H089 658 aaKnown RBP7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 TRPV6Q9H1D0 765 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 CDHR5Q9HBB8 845 aa7.36□□□□□ -1.23
CSGALNACT1-212ENST00000523227 PRRC2BQ5JSZ5 2229 aaKnown RBP7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 MYH7BA7E2Y1 1941 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 PRUNE2Q8WUY3 3088 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 CCDC69A6NI79 296 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 GCOM1H8Y6P7 765 aaPredicted RBP7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 PRC1O43663 620 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 CYTH3O43739 400 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 PPP1R11O60927 126 aaPredicted RBP7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 STAM2O75886 525 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 ARIH2O95376 493 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 MMP3P08254 477 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 POLR2MP0CAP2 368 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 CALM1P0DP23 149 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 CALM2P0DP24 149 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 CALM3P0DP25 149 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 TGFB3P10600 412 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 BMP1P13497 986 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 RFC2P35250 354 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 PBX2P40425 430 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 LIFRP42702 1097 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 GNAQP50148 359 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 ARHGAP1Q07960 439 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 LAMC2Q13753 1193 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 PGM5Q15124 567 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 NECTIN1Q15223 517 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 DGKDQ16760 1214 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 LY6KQ17RY6 165 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 NBPF20Q3BBV1 942 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 FAM47CQ5HY64 1035 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 TMEM31Q5JXX7 168 aa7.35□□□□□ -1.23
CSGALNACT1-212ENST00000523227 RNF20Q5VTR2 975 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms