RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 HOMER1Q86YM7 354 aa7.8□□□□□ -1.16
CSMD1-211ENST00000523062 ELOA2Q8IYF1 753 aaPredicted RBP7.8□□□□□ -1.16
CSMD1-211ENST00000523062 FAM151AQ8WW52 585 aa7.8□□□□□ -1.16
CSMD1-211ENST00000523062 CCDC34Q96HJ3 373 aa7.8□□□□□ -1.16
CSMD1-211ENST00000523062 ZBED3Q96IU2 234 aaPredicted RBP7.8□□□□□ -1.16
CSMD1-211ENST00000523062 PIGSQ96S52 555 aa7.8□□□□□ -1.16
CSMD1-211ENST00000523062 UBA5Q9GZZ9 404 aa7.8□□□□□ -1.16
CSMD1-211ENST00000523062 ZMYND12Q9H0C1 365 aa7.8□□□□□ -1.16
CSMD1-211ENST00000523062 CPVLQ9H3G5 476 aa7.8□□□□□ -1.16
CSMD1-211ENST00000523062 CBX8Q9HC52 389 aa7.8□□□□□ -1.16
CSMD1-211ENST00000523062 PPP1R1BQ9UD71 204 aaPredicted RBP7.8□□□□□ -1.16
CSMD1-211ENST00000523062 USP25Q9UHP3 1055 aa7.8□□□□□ -1.16
CSMD1-211ENST00000523062 GDF2Q9UK05 429 aaPredicted RBP7.8□□□□□ -1.16
CSMD1-211ENST00000523062 FER1L6Q2WGJ9 1857 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 KRTAP4-8A0A0G2JLE6 195 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 PNMA6FA0A0J9YX94 578 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 SCO2A0A1W2PP80 73 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 M0R2N6 131 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 ERVH48-1M5A8F1 160 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 EEF2P13639 858 aaKnown RBP7.79□□□□□ -1.16
CSMD1-211ENST00000523062 GPC1P35052 558 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 ADCY7P51828 1080 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 ORC2Q13416 577 aaPredicted RBP7.79□□□□□ -1.16
CSMD1-211ENST00000523062 SEPT2Q15019 361 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 NONOQ15233 471 aaKnown RBP eCLIP7.79□□□□□ -1.16
CSMD1-211ENST00000523062 ZNF174Q15697 407 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 NOM1Q5C9Z4 860 aaKnown RBP7.79□□□□□ -1.16
CSMD1-211ENST00000523062 ARL6IP4Q66PJ3 421 aaKnown RBP7.79□□□□□ -1.16
CSMD1-211ENST00000523062 SLFN13Q68D06 897 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 KRBA2Q6ZNG9 492 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 FAM83AQ86UY5 434 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 CNNM3Q8NE01 707 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 GMCL1P1Q8NEA9 526 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 RASGRP4Q8TDF6 673 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 EDARADDQ8WWZ3 215 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 MKL1Q969V6 931 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 GAS2L1Q99501 681 aaPredicted RBP7.79□□□□□ -1.16
CSMD1-211ENST00000523062 PYM1Q9BRP8 204 aaKnown RBP7.79□□□□□ -1.16
CSMD1-211ENST00000523062 NAT10Q9H0A0 1025 aaKnown RBP7.79□□□□□ -1.16
CSMD1-211ENST00000523062 CSRNP2Q9H175 543 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 DNAJC25Q9H1X3 360 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.79□□□□□ -1.16
CSMD1-211ENST00000523062 VEZTQ9HBM0 779 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 VAT1LQ9HCJ6 419 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 PCDHA6Q9UN73 950 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 BCS1LQ9Y276 419 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 PCDHA8Q9Y5H6 950 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 CNTNAP1P78357 1384 aa7.79□□□□□ -1.16
CSMD1-211ENST00000523062 SMCO2A6NFE2 343 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 GOLGA6L19H0YKK7 550 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 ZBTB5O15062 677 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 ADCY5O95622 1261 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 GH2P01242 217 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 MCM7P33993 719 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 SLC1A4P43007 532 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 TNNI2P48788 182 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 NLRP12P59046 1061 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 ZNF280AP59817 542 aaPredicted RBP7.78□□□□□ -1.16
CSMD1-211ENST00000523062 GRIN1Q05586 938 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 TNFAIP1Q13829 316 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 INF2Q27J81 1249 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 NBPF20Q3BBV1 942 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 LINC00114Q6XXX2 140 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 C11orf57Q6ZUT1 292 aaPredicted RBP7.78□□□□□ -1.16
CSMD1-211ENST00000523062 LUZP1Q86V48 1076 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 ADGRF4Q8IZF3 695 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 REXO1Q8N1G1 1221 aaKnown RBP7.78□□□□□ -1.16
CSMD1-211ENST00000523062 MTMR8Q96EF0 704 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 CFHR5Q9BXR6 569 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 GLT8D2Q9H1C3 349 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 JMJD4Q9H9V9 463 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 ARHGEF10LQ9HCE6 1279 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 MYOZ2Q9NPC6 264 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 CCDC39Q9UFE4 941 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 TUBE1Q9UJT0 475 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 MYH4Q9Y623 1939 aa7.78□□□□□ -1.16
CSMD1-211ENST00000523062 VWA3AA6NCI4 1184 aa7.77□□□□□ -1.17
CSMD1-211ENST00000523062 BECN2A8MW95 431 aa7.77□□□□□ -1.17
CSMD1-211ENST00000523062 LAD1O00515 517 aa7.77□□□□□ -1.17
CSMD1-211ENST00000523062 GNB5O14775 395 aa7.77□□□□□ -1.17
CSMD1-211ENST00000523062 ADAMTS3O15072 1205 aa7.77□□□□□ -1.17
CSMD1-211ENST00000523062 POLR2DO15514 142 aaKnown RBP7.77□□□□□ -1.17
CSMD1-211ENST00000523062 RAD21O60216 631 aa7.77□□□□□ -1.17
CSMD1-211ENST00000523062 PTMAP06454 111 aaKnown RBP7.77□□□□□ -1.17
CSMD1-211ENST00000523062 HOXB4P17483 251 aaPredicted RBP7.77□□□□□ -1.17
CSMD1-211ENST00000523062 LONP1P36776 959 aaKnown RBP7.77□□□□□ -1.17
CSMD1-211ENST00000523062 TXLNAP40222 546 aa7.77□□□□□ -1.17
CSMD1-211ENST00000523062 PRPHP41219 470 aa7.77□□□□□ -1.17
CSMD1-211ENST00000523062 DOC2BQ14184 412 aa7.77□□□□□ -1.17
CSMD1-211ENST00000523062 IQCB1Q15051 598 aa7.77□□□□□ -1.17
CSMD1-211ENST00000523062 POSTNQ15063 836 aa7.77□□□□□ -1.17
CSMD1-211ENST00000523062 SHROOM1Q2M3G4 852 aaPredicted RBP7.77□□□□□ -1.17
CSMD1-211ENST00000523062 LONRF3Q496Y0 759 aa7.77□□□□□ -1.17
CSMD1-211ENST00000523062 SPECC1Q5M775 1068 aa7.77□□□□□ -1.17
CSMD1-211ENST00000523062 TTBK2Q6IQ55 1244 aa7.77□□□□□ -1.17
CSMD1-211ENST00000523062 KCTD1Q719H9 257 aa7.77□□□□□ -1.17
CSMD1-211ENST00000523062 NEK8Q86SG6 692 aa7.77□□□□□ -1.17
CSMD1-211ENST00000523062 FAM43AQ8N2R8 423 aa7.77□□□□□ -1.17
CSMD1-211ENST00000523062 ADAM32Q8TC27 787 aa7.77□□□□□ -1.17
CSMD1-211ENST00000523062 BPIFA3Q9BQP9 254 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms