RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 CCDC103Q8IW40 242 aa6.7□□□□□ -1.34
HMGB1P1-201ENST00000522557 BTG4Q9NY30 223 aa6.7□□□□□ -1.34
HMGB1P1-201ENST00000522557 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.7□□□□□ -1.34
HMGB1P1-201ENST00000522557 MARCH2Q9P0N8 246 aa6.7□□□□□ -1.34
HMGB1P1-201ENST00000522557 SIT1Q9Y3P8 196 aa6.7□□□□□ -1.34
HMGB1P1-201ENST00000522557 KRTAP4-8A0A0G2JLE6 195 aa6.69□□□□□ -1.34
HMGB1P1-201ENST00000522557 RAB11FIP3O75154 756 aa6.69□□□□□ -1.34
HMGB1P1-201ENST00000522557 DNAJC8O75937 253 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P1-201ENST00000522557 NTRK1P04629 796 aa6.69□□□□□ -1.34
HMGB1P1-201ENST00000522557 SDSP20132 328 aa6.69□□□□□ -1.34
HMGB1P1-201ENST00000522557 FBLN1P23142 703 aa6.69□□□□□ -1.34
HMGB1P1-201ENST00000522557 KCNJ6P48051 423 aa6.69□□□□□ -1.34
HMGB1P1-201ENST00000522557 IGBP1P78318 339 aa6.69□□□□□ -1.34
HMGB1P1-201ENST00000522557 FAM129CQ86XR2 697 aa6.69□□□□□ -1.34
HMGB1P1-201ENST00000522557 TEX2Q8IWB9 1127 aa6.69□□□□□ -1.34
HMGB1P1-201ENST00000522557 SLC7A14Q8TBB6 771 aa6.69□□□□□ -1.34
HMGB1P1-201ENST00000522557 DACT3Q96B18 629 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P1-201ENST00000522557 IER2Q9BTL4 223 aa6.69□□□□□ -1.34
HMGB1P1-201ENST00000522557 TYW1Q9NV66 732 aaKnown RBP6.69□□□□□ -1.34
HMGB1P1-201ENST00000522557 RFXAPO00287 272 aa6.68□□□□□ -1.34
HMGB1P1-201ENST00000522557 RAPGEF3O95398 923 aa6.68□□□□□ -1.34
HMGB1P1-201ENST00000522557 ATF2P15336 505 aa6.68□□□□□ -1.34
HMGB1P1-201ENST00000522557 IGFBP6P24592 240 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P1-201ENST00000522557 VMACQ2NL98 169 aa6.68□□□□□ -1.34
HMGB1P1-201ENST00000522557 CNKSR3Q6P9H4 555 aa6.68□□□□□ -1.34
HMGB1P1-201ENST00000522557 NSMFQ6X4W1 530 aa6.68□□□□□ -1.34
HMGB1P1-201ENST00000522557 CABP7Q86V35 215 aa6.68□□□□□ -1.34
HMGB1P1-201ENST00000522557 AFAP1L2Q8N4X5 818 aa6.68□□□□□ -1.34
HMGB1P1-201ENST00000522557 TMEM145Q8NBT3 493 aa6.68□□□□□ -1.34
HMGB1P1-201ENST00000522557 DIO2Q92813 273 aa6.68□□□□□ -1.34
HMGB1P1-201ENST00000522557 PRODHO43272 600 aa6.67□□□□□ -1.34
HMGB1P1-201ENST00000522557 MC3RP41968 323 aa6.67□□□□□ -1.34
HMGB1P1-201ENST00000522557 LIMS1P48059 325 aa6.67□□□□□ -1.34
HMGB1P1-201ENST00000522557 TAF7LQ5H9L4 462 aa6.67□□□□□ -1.34
HMGB1P1-201ENST00000522557 WWC2Q6AWC2 1192 aa6.67□□□□□ -1.34
HMGB1P1-201ENST00000522557 IQCEQ6IPM2 695 aa6.67□□□□□ -1.34
HMGB1P1-201ENST00000522557 DHX37Q8IY37 1157 aaKnown RBP6.67□□□□□ -1.34
HMGB1P1-201ENST00000522557 NETO2Q8NC67 525 aa6.67□□□□□ -1.34
HMGB1P1-201ENST00000522557 RCBTB1Q8NDN9 531 aa6.67□□□□□ -1.34
HMGB1P1-201ENST00000522557 ALG3Q92685 438 aa6.67□□□□□ -1.34
HMGB1P1-201ENST00000522557 SCLYQ96I15 445 aa6.67□□□□□ -1.34
HMGB1P1-201ENST00000522557 CCDC140Q96MF4 163 aa6.67□□□□□ -1.34
HMGB1P1-201ENST00000522557 SLC52A2Q9HAB3 445 aa6.67□□□□□ -1.34
HMGB1P1-201ENST00000522557 TIMM13Q9Y5L4 95 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P1-201ENST00000522557 NPFFR2Q9Y5X5 522 aa6.67□□□□□ -1.34
HMGB1P1-201ENST00000522557 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 C22orf46C9J442 243 aa6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 MEFVO15553 781 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 CPP00450 1065 aa6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 ASGR2P07307 311 aa6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 LCP1P13796 627 aa6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 PFKLP17858 780 aa6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 CDK11BP21127 795 aaKnown RBP6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 FPR2P25090 351 aa6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 BCL6P41182 706 aa6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 AFF3P51826 1226 aaKnown RBP6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 GABREP78334 506 aa6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 TARBP2Q15633 366 aaKnown RBP6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 C21orf62-AS1Q17RA5 79 aa6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 TCERG1LQ5VWI1 586 aa6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 E4F1Q66K89 784 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 CEP68Q76N32 757 aa6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 PEX11GQ96HA9 241 aa6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 PWWP2AQ96N64 755 aa6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 TARS2Q9BW92 718 aaKnown RBP6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 MAGEC2Q9UBF1 373 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 FBXL7Q9UJT9 491 aa6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 MAPRE3Q9UPY8 281 aa6.66□□□□□ -1.34
HMGB1P1-201ENST00000522557 PDE8AO60658 829 aa6.65□□□□□ -1.34
HMGB1P1-201ENST00000522557 EYA4O95677 639 aa6.65□□□□□ -1.34
HMGB1P1-201ENST00000522557 PMLP29590 882 aa6.65□□□□□ -1.34
HMGB1P1-201ENST00000522557 CDKN1CP49918 316 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P1-201ENST00000522557 RPL11P62913 178 aaKnown RBP6.65□□□□□ -1.34
HMGB1P1-201ENST00000522557 FOXO4P98177 505 aa6.65□□□□□ -1.34
HMGB1P1-201ENST00000522557 ACBD5Q5T8D3 534 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P1-201ENST00000522557 STYK1Q6J9G0 422 aa6.65□□□□□ -1.34
HMGB1P1-201ENST00000522557 BRAPQ7Z569 592 aa6.65□□□□□ -1.34
HMGB1P1-201ENST00000522557 PPIL6Q8IXY8 311 aa6.65□□□□□ -1.34
HMGB1P1-201ENST00000522557 TSPAN17Q96FV3 270 aa6.65□□□□□ -1.34
HMGB1P1-201ENST00000522557 CDC6Q99741 560 aa6.65□□□□□ -1.34
HMGB1P1-201ENST00000522557 ORAI3Q9BRQ5 295 aa6.65□□□□□ -1.34
HMGB1P1-201ENST00000522557 CAAP1Q9H8G2 361 aa6.65□□□□□ -1.34
HMGB1P1-201ENST00000522557 DDX56Q9NY93 547 aaKnown RBP6.65□□□□□ -1.34
HMGB1P1-201ENST00000522557 SFMBT1Q9UHJ3 866 aa6.65□□□□□ -1.34
HMGB1P1-201ENST00000522557 NUDT5Q9UKK9 219 aa6.65□□□□□ -1.34
HMGB1P1-201ENST00000522557 ASXL2Q76L83 1435 aa6.65□□□□□ -1.35
HMGB1P1-201ENST00000522557 MYCLP1P12525 358 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P1-201ENST00000522557 NCAM1P13591 858 aa6.64□□□□□ -1.35
HMGB1P1-201ENST00000522557 BMP7P18075 431 aa6.64□□□□□ -1.35
HMGB1P1-201ENST00000522557 IBSPP21815 317 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P1-201ENST00000522557 LTBRP36941 435 aa6.64□□□□□ -1.35
HMGB1P1-201ENST00000522557 KCNAB2Q13303 367 aa6.64□□□□□ -1.35
HMGB1P1-201ENST00000522557 PLEKHG6Q3KR16 790 aa6.64□□□□□ -1.35
HMGB1P1-201ENST00000522557 LCE4AQ5TA78 99 aa6.64□□□□□ -1.35
HMGB1P1-201ENST00000522557 MAMDC2Q7Z304 686 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P1-201ENST00000522557 FGD2Q7Z6J4 655 aa6.64□□□□□ -1.35
HMGB1P1-201ENST00000522557 LRRTM3Q86VH5 581 aa6.64□□□□□ -1.35
HMGB1P1-201ENST00000522557 NLRP10Q86W26 655 aa6.64□□□□□ -1.35
HMGB1P1-201ENST00000522557 TMEM151BQ8IW70 566 aa6.64□□□□□ -1.35
HMGB1P1-201ENST00000522557 PCDHA2Q9Y5H9 948 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 246.7 ms