RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 LGR5O75473 907 aa10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 LINC00271P0C7V0 271 aa10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 SELPP16109 830 aa10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 OAZ1P54368 228 aa10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 RBL2Q08999 1139 aa10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 SIGLEC14Q08ET2 396 aa10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 SMAD4Q13485 552 aaKnown RBP10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 GPM6BQ13491 265 aa10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 AMHR2Q16671 573 aa10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 GDF6Q6KF10 455 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 LRRC8DQ7L1W4 858 aa10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 AFAP1L1Q8TED9 768 aa10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 NLRP7Q8WX94 980 aa10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 MSLNLQ96KJ4 702 aa10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 CNTNAP3BQ96NU0 1288 aa10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 CNTNAP3Q9BZ76 1288 aa10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 WDR11Q9BZH6 1224 aa10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 SMC4Q9NTJ3 1288 aa10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 OTOGLQ3ZCN5 2332 aa10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 GREB1LQ9C091 1923 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 ZNF532Q9HCE3 1301 aa10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 GPR179Q6PRD1 2367 aa10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 RBM47A0AV96 593 aaKnown RBP10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 A6NJR5 290 aa10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 EYA4O95677 639 aa10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 GNAI3P08754 354 aa10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 CKBP12277 381 aa10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 PTPN11Q06124 597 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 PTGISQ16647 500 aa10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 MUM1L1Q5H9M0 696 aa10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 SLC9C2Q5TAH2 1124 aa10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 TMED8Q6PL24 325 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 TMEM192Q8IY95 271 aa10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 CAGE1Q8TC20 777 aa10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 WNT8BQ93098 351 aa10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 RMDN1Q96DB5 314 aa10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 IRF2BPLQ9H1B7 796 aa10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 ACAD9Q9H845 621 aa10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 ARMT1Q9H993 441 aa10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 VTA1Q9NP79 307 aa10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 ANKRD11Q6UB99 2663 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC9-212ENST00000521944 ACTN4O43707 911 aaKnown RBP10.65□□□□□ -0.7
TRAPPC9-212ENST00000521944 CHGBP05060 677 aa10.65□□□□□ -0.7
TRAPPC9-212ENST00000521944 ADAM15Q13444 863 aa10.65□□□□□ -0.7
TRAPPC9-212ENST00000521944 TRIM71Q2Q1W2 868 aaKnown RBP10.65□□□□□ -0.7
TRAPPC9-212ENST00000521944 ADSSL1Q8N142 457 aa10.65□□□□□ -0.7
TRAPPC9-212ENST00000521944 COPS5Q92905 334 aa10.65□□□□□ -0.7
TRAPPC9-212ENST00000521944 CRBNQ96SW2 442 aa10.65□□□□□ -0.7
TRAPPC9-212ENST00000521944 OSBPL7Q9BZF2 842 aa10.65□□□□□ -0.7
TRAPPC9-212ENST00000521944 RNF146Q9NTX7 359 aa10.65□□□□□ -0.7
TRAPPC9-212ENST00000521944 CYP39A1Q9NYL5 469 aa10.65□□□□□ -0.7
TRAPPC9-212ENST00000521944 CLEC1BQ9P126 229 aa10.65□□□□□ -0.7
TRAPPC9-212ENST00000521944 NYAP2Q9P242 653 aa10.65□□□□□ -0.7
TRAPPC9-212ENST00000521944 COG6Q9Y2V7 657 aa10.65□□□□□ -0.7
TRAPPC9-212ENST00000521944 IGKV6D-41A0A0C4DH26 115 aa10.64□□□□□ -0.71
TRAPPC9-212ENST00000521944 GRM6O15303 877 aa10.64□□□□□ -0.71
TRAPPC9-212ENST00000521944 NCK2O43639 380 aa10.64□□□□□ -0.71
TRAPPC9-212ENST00000521944 CPT1AP50416 773 aa10.64□□□□□ -0.71
TRAPPC9-212ENST00000521944 KCNC4Q03721 635 aa10.64□□□□□ -0.71
TRAPPC9-212ENST00000521944 CAMK1Q14012 370 aa10.64□□□□□ -0.71
TRAPPC9-212ENST00000521944 IKBKEQ14164 716 aa10.64□□□□□ -0.71
TRAPPC9-212ENST00000521944 FRMD5Q7Z6J6 570 aa10.64□□□□□ -0.71
TRAPPC9-212ENST00000521944 SESTD1Q86VW0 696 aa10.64□□□□□ -0.71
TRAPPC9-212ENST00000521944 FBXO11Q86XK2 927 aa10.64□□□□□ -0.71
TRAPPC9-212ENST00000521944 KAT2BQ92831 832 aa10.64□□□□□ -0.71
TRAPPC9-212ENST00000521944 API5Q9BZZ5 524 aaKnown RBP10.64□□□□□ -0.71
TRAPPC9-212ENST00000521944 MRS2Q9HD23 443 aa10.64□□□□□ -0.71
TRAPPC9-212ENST00000521944 CD207Q9UJ71 328 aa10.64□□□□□ -0.71
TRAPPC9-212ENST00000521944 FEM1BQ9UK73 627 aa10.64□□□□□ -0.71
TRAPPC9-212ENST00000521944 PCDHB3Q9Y5E6 796 aa10.64□□□□□ -0.71
TRAPPC9-212ENST00000521944 TRIM66O15016 1216 aa10.63□□□□□ -0.71
TRAPPC9-212ENST00000521944 GNAI2P04899 355 aa10.63□□□□□ -0.71
TRAPPC9-212ENST00000521944 ARP10275 920 aa10.63□□□□□ -0.71
TRAPPC9-212ENST00000521944 RASA1P20936 1047 aa10.63□□□□□ -0.71
TRAPPC9-212ENST00000521944 SNAP25P60880 206 aa10.63□□□□□ -0.71
TRAPPC9-212ENST00000521944 SLFN5Q08AF3 891 aa10.63□□□□□ -0.71
TRAPPC9-212ENST00000521944 ZNF618Q5T7W0 954 aa10.63□□□□□ -0.71
TRAPPC9-212ENST00000521944 CTR9Q6PD62 1173 aa10.63□□□□□ -0.71
TRAPPC9-212ENST00000521944 MYOCDQ8IZQ8 938 aa10.63□□□□□ -0.71
TRAPPC9-212ENST00000521944 TMEM105Q8N8V8 129 aa10.63□□□□□ -0.71
TRAPPC9-212ENST00000521944 DBF4BQ8NFT6 615 aa10.63□□□□□ -0.71
TRAPPC9-212ENST00000521944 OR6J1Q8NGC5 347 aa10.63□□□□□ -0.71
TRAPPC9-212ENST00000521944 SSH3Q8TE77 659 aa10.63□□□□□ -0.71
TRAPPC9-212ENST00000521944 MKL1Q969V6 931 aa10.63□□□□□ -0.71
TRAPPC9-212ENST00000521944 SAMD11Q96NU1 681 aa10.63□□□□□ -0.71
TRAPPC9-212ENST00000521944 TRERF1Q96PN7 1200 aa10.63□□□□□ -0.71
TRAPPC9-212ENST00000521944 IL21Q9HBE4 155 aa10.63□□□□□ -0.71
TRAPPC9-212ENST00000521944 CLIP2Q9UDT6 1046 aa10.63□□□□□ -0.71
TRAPPC9-212ENST00000521944 TNNQ9UQP3 1299 aa10.63□□□□□ -0.71
TRAPPC9-212ENST00000521944 NOD1Q9Y239 953 aa10.63□□□□□ -0.71
TRAPPC9-212ENST00000521944 MYO10Q9HD67 2058 aa10.62□□□□□ -0.71
TRAPPC9-212ENST00000521944 EFCAB14O75071 495 aa10.62□□□□□ -0.71
TRAPPC9-212ENST00000521944 BCAR3O75815 825 aa10.62□□□□□ -0.71
TRAPPC9-212ENST00000521944 ARIH2O95376 493 aa10.62□□□□□ -0.71
TRAPPC9-212ENST00000521944 RRP1P56182 461 aaKnown RBP10.62□□□□□ -0.71
TRAPPC9-212ENST00000521944 SMRP1Q8NCR6 262 aa10.62□□□□□ -0.71
TRAPPC9-212ENST00000521944 NKD2Q969F2 451 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC9-212ENST00000521944 TOP1MTQ969P6 601 aa10.62□□□□□ -0.71
TRAPPC9-212ENST00000521944 MTRQ99707 1265 aa10.62□□□□□ -0.71
TRAPPC9-212ENST00000521944 IGFLR1Q9H665 355 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms