RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 EVCP57679 992 aa20.54■□□□□ 0.88
TRAPPC9-211ENST00000521700 SEMA3FQ13275 785 aa20.54■□□□□ 0.88
TRAPPC9-211ENST00000521700 HSDL1Q3SXM5 330 aa20.54■□□□□ 0.88
TRAPPC9-211ENST00000521700 GNPTABQ3T906 1256 aa20.54■□□□□ 0.88
TRAPPC9-211ENST00000521700 NFRKBQ6P4R8 1299 aa20.54■□□□□ 0.88
TRAPPC9-211ENST00000521700 HIPK3Q9H422 1215 aa20.54■□□□□ 0.88
TRAPPC9-211ENST00000521700 PCDHA6Q9UN73 950 aa20.54■□□□□ 0.88
TRAPPC9-211ENST00000521700 PCDHA8Q9Y5H6 950 aa20.54■□□□□ 0.88
TRAPPC9-211ENST00000521700 CYP46A1Q9Y6A2 500 aa20.54■□□□□ 0.88
TRAPPC9-211ENST00000521700 NID2Q14112 1375 aa20.54■□□□□ 0.88
TRAPPC9-211ENST00000521700 UMODL1Q5DID0 1318 aa20.53■□□□□ 0.88
TRAPPC9-211ENST00000521700 STXBP3O00186 592 aa20.53■□□□□ 0.88
TRAPPC9-211ENST00000521700 SUPT20HL2P0C7V6 817 aa20.53■□□□□ 0.88
TRAPPC9-211ENST00000521700 CSF2RAP15509 400 aa20.53■□□□□ 0.88
TRAPPC9-211ENST00000521700 PDIA3P30101 505 aaKnown RBP20.53■□□□□ 0.88
TRAPPC9-211ENST00000521700 CHMP4BP1P59074 171 aa20.53■□□□□ 0.88
TRAPPC9-211ENST00000521700 PTPN11Q06124 597 aaPredicted RBP20.53■□□□□ 0.88
TRAPPC9-211ENST00000521700 TOB2Q14106 344 aaPredicted RBP20.53■□□□□ 0.88
TRAPPC9-211ENST00000521700 PPP1R18Q6NYC8 613 aa20.53■□□□□ 0.88
TRAPPC9-211ENST00000521700 TMEM199Q8N511 208 aa20.53■□□□□ 0.88
TRAPPC9-211ENST00000521700 SPATA33Q96N06 139 aa20.53■□□□□ 0.88
TRAPPC9-211ENST00000521700 NOC4LQ9BVI4 516 aaKnown RBP20.53■□□□□ 0.88
TRAPPC9-211ENST00000521700 MLXIPQ9HAP2 919 aa20.53■□□□□ 0.88
TRAPPC9-211ENST00000521700 RIC8AQ9NPQ8 531 aa20.53■□□□□ 0.88
TRAPPC9-211ENST00000521700 BARHL2Q9NY43 387 aa20.53■□□□□ 0.88
TRAPPC9-211ENST00000521700 SPDYE3A6NKU9 549 aa20.52■□□□□ 0.88
TRAPPC9-211ENST00000521700 hCG_1984214I3L0E3 225 aa20.52■□□□□ 0.88
TRAPPC9-211ENST00000521700 FIBPO43427 364 aa20.52■□□□□ 0.88
TRAPPC9-211ENST00000521700 PPFIA4O75335 1185 aa20.52■□□□□ 0.88
TRAPPC9-211ENST00000521700 CYP2C9P11712 490 aa20.52■□□□□ 0.88
TRAPPC9-211ENST00000521700 HOXD8P13378 290 aaPredicted RBP20.52■□□□□ 0.88
TRAPPC9-211ENST00000521700 PPIGQ13427 754 aaKnown RBP eCLIP20.52■□□□□ 0.88
TRAPPC9-211ENST00000521700 PFKFB3Q16875 520 aaPredicted RBP20.52■□□□□ 0.88
TRAPPC9-211ENST00000521700 C16orf59Q7L2K0 433 aa20.52■□□□□ 0.88
TRAPPC9-211ENST00000521700 ZNF713Q8N859 430 aaPredicted RBP20.52■□□□□ 0.88
TRAPPC9-211ENST00000521700 UPF3BQ9BZI7 483 aaKnown RBP20.52■□□□□ 0.88
TRAPPC9-211ENST00000521700 SMCO2A6NFE2 343 aa20.51■□□□□ 0.87
TRAPPC9-211ENST00000521700 PRPF3O43395 683 aaKnown RBP20.51■□□□□ 0.87
TRAPPC9-211ENST00000521700 CCT2P78371 535 aaKnown RBP20.51■□□□□ 0.87
TRAPPC9-211ENST00000521700 NTRK3Q16288 839 aa20.51■□□□□ 0.87
TRAPPC9-211ENST00000521700 GPR153Q6NV75 609 aa20.51■□□□□ 0.87
TRAPPC9-211ENST00000521700 NLRX1Q86UT6 975 aa20.51■□□□□ 0.87
TRAPPC9-211ENST00000521700 HAS3O00219 553 aa20.5■□□□□ 0.87
TRAPPC9-211ENST00000521700 F2P00734 622 aa20.5■□□□□ 0.87
TRAPPC9-211ENST00000521700 ZNF286BP0CG31 522 aa20.5■□□□□ 0.87
TRAPPC9-211ENST00000521700 SCG2P13521 617 aa20.5■□□□□ 0.87
TRAPPC9-211ENST00000521700 ITGB5P18084 799 aa20.5■□□□□ 0.87
TRAPPC9-211ENST00000521700 PSEN2P49810 448 aa20.5■□□□□ 0.87
TRAPPC9-211ENST00000521700 ADCY7P51828 1080 aa20.5■□□□□ 0.87
TRAPPC9-211ENST00000521700 CCL23P55773 120 aa20.5■□□□□ 0.87
TRAPPC9-211ENST00000521700 NEDD9Q14511 834 aa20.5■□□□□ 0.87
TRAPPC9-211ENST00000521700 PKN1Q16512 942 aa20.5■□□□□ 0.87
TRAPPC9-211ENST00000521700 CYFIP1Q7L576 1253 aa20.5■□□□□ 0.87
TRAPPC9-211ENST00000521700 SESTD1Q86VW0 696 aa20.5■□□□□ 0.87
TRAPPC9-211ENST00000521700 TEX2Q8IWB9 1127 aa20.5■□□□□ 0.87
TRAPPC9-211ENST00000521700 PHKBQ93100 1093 aa20.5■□□□□ 0.87
TRAPPC9-211ENST00000521700 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.5■□□□□ 0.87
TRAPPC9-211ENST00000521700 LARP6Q9BRS8 491 aaKnown RBP20.5■□□□□ 0.87
TRAPPC9-211ENST00000521700 WNT8AQ9H1J5 351 aa20.5■□□□□ 0.87
TRAPPC9-211ENST00000521700 ACRP10323 421 aa20.49■□□□□ 0.87
TRAPPC9-211ENST00000521700 TMEM240Q5SV17 173 aa20.49■□□□□ 0.87
TRAPPC9-211ENST00000521700 METTL7BQ6UX53 244 aa20.49■□□□□ 0.87
TRAPPC9-211ENST00000521700 PGBD1Q96JS3 809 aa20.49■□□□□ 0.87
TRAPPC9-211ENST00000521700 RNPC3Q96LT9 517 aaKnown RBP20.49■□□□□ 0.87
TRAPPC9-211ENST00000521700 SENP7Q9BQF6 1050 aa20.49■□□□□ 0.87
TRAPPC9-211ENST00000521700 C16orf70Q9BSU1 422 aa20.49■□□□□ 0.87
TRAPPC9-211ENST00000521700 ALG1Q9BT22 464 aa20.49■□□□□ 0.87
TRAPPC9-211ENST00000521700 NCOA5Q9HCD5 579 aaKnown RBP20.49■□□□□ 0.87
TRAPPC9-211ENST00000521700 PDRG1Q9NUG6 133 aa20.49■□□□□ 0.87
TRAPPC9-211ENST00000521700 UBIAD1Q9Y5Z9 338 aa20.49■□□□□ 0.87
TRAPPC9-211ENST00000521700 DOCK5Q9H7D0 1870 aa20.49■□□□□ 0.87
TRAPPC9-211ENST00000521700 ATP9AO75110 1047 aa20.48■□□□□ 0.87
TRAPPC9-211ENST00000521700 PPFIA3O75145 1194 aa20.48■□□□□ 0.87
TRAPPC9-211ENST00000521700 FOSP01100 380 aaPredicted RBP20.48■□□□□ 0.87
TRAPPC9-211ENST00000521700 IFNAR1P17181 557 aa20.48■□□□□ 0.87
TRAPPC9-211ENST00000521700 CLK2P49760 499 aaKnown RBP20.48■□□□□ 0.87
TRAPPC9-211ENST00000521700 MFSD10Q14728 455 aa20.48■□□□□ 0.87
TRAPPC9-211ENST00000521700 PTGISQ16647 500 aa20.48■□□□□ 0.87
TRAPPC9-211ENST00000521700 KIAA0753Q2KHM9 967 aa20.48■□□□□ 0.87
TRAPPC9-211ENST00000521700 GDF6Q6KF10 455 aaPredicted RBP20.48■□□□□ 0.87
TRAPPC9-211ENST00000521700 ZNF365Q70YC5 407 aa20.48■□□□□ 0.87
TRAPPC9-211ENST00000521700 GPRASP2Q96D09 838 aa20.48■□□□□ 0.87
TRAPPC9-211ENST00000521700 ZNF274Q96GC6 653 aaPredicted RBP20.48■□□□□ 0.87
TRAPPC9-211ENST00000521700 CTAGE1Q96RT6 745 aa20.48■□□□□ 0.87
TRAPPC9-211ENST00000521700 KATNAL1Q9BW62 490 aa20.48■□□□□ 0.87
TRAPPC9-211ENST00000521700 EHMT1Q9H9B1 1298 aa20.48■□□□□ 0.87
TRAPPC9-211ENST00000521700 IL23AQ9NPF7 189 aa20.48■□□□□ 0.87
TRAPPC9-211ENST00000521700 TMEM260Q9NX78 707 aa20.48■□□□□ 0.87
TRAPPC9-211ENST00000521700 HDAC6Q9UBN7 1215 aa20.48■□□□□ 0.87
TRAPPC9-211ENST00000521700 TELO2Q9Y4R8 837 aa20.48■□□□□ 0.87
TRAPPC9-211ENST00000521700 C7orf31Q8N865 590 aa20.47■□□□□ 0.87
TRAPPC9-211ENST00000521700 SCLYQ96I15 445 aa20.47■□□□□ 0.87
TRAPPC9-211ENST00000521700 GPR20Q99678 358 aa20.47■□□□□ 0.87
TRAPPC9-211ENST00000521700 RNF26Q9BY78 433 aaPredicted RBP20.47■□□□□ 0.87
TRAPPC9-211ENST00000521700 ANO3Q9BYT9 981 aa20.47■□□□□ 0.87
TRAPPC9-211ENST00000521700 GLT8D2Q9H1C3 349 aa20.47■□□□□ 0.87
TRAPPC9-211ENST00000521700 JADE2Q9NQC1 790 aa20.47■□□□□ 0.87
TRAPPC9-211ENST00000521700 GTF2IRD1Q9UHL9 959 aa20.47■□□□□ 0.87
TRAPPC9-211ENST00000521700 NOD1Q9Y239 953 aa20.47■□□□□ 0.87
TRAPPC9-211ENST00000521700 NOP56O00567 594 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms