RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 IQCA1Q86XH1 822 aa12.48□□□□□ -0.41
MRPS28-208ENST00000521605 CCDC17Q96LX7 622 aa12.48□□□□□ -0.41
MRPS28-208ENST00000521605 MAP3K14Q99558 947 aa12.48□□□□□ -0.41
MRPS28-208ENST00000521605 SEZ6LQ9BYH1 1024 aa12.48□□□□□ -0.41
MRPS28-208ENST00000521605 SCAND2PQ9GZW5 306 aaPredicted RBP12.48□□□□□ -0.41
MRPS28-208ENST00000521605 PDGFCQ9NRA1 345 aa12.48□□□□□ -0.41
MRPS28-208ENST00000521605 BRWD1Q9NSI6 2320 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 FSD2A1L4K1 749 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 GRXCR2A6NFK2 248 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 USP17L12C9JPN9 530 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 USP17L21D6R901 530 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 H3BQ06 376 aaPredicted RBP12.47□□□□□ -0.41
MRPS28-208ENST00000521605 JAK2O60674 1132 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 SUPT20HL2P0C7V6 817 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 CALM1P0DP23 149 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 CALM2P0DP24 149 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 CALM3P0DP25 149 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 IFNAR1P17181 557 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 KCNJ6P48051 423 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 METAP2P50579 478 aaKnown RBP eCLIP12.47□□□□□ -0.41
MRPS28-208ENST00000521605 UBE2HP62256 183 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 CTDSPL2Q05D32 466 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 STK3Q13188 491 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 WTAPQ15007 396 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 EP400NLQ6ZTU2 488 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 FBXO16Q8IX29 292 aaPredicted RBP12.47□□□□□ -0.41
MRPS28-208ENST00000521605 PRPF38AQ8NAV1 312 aaKnown RBP12.47□□□□□ -0.41
MRPS28-208ENST00000521605 RETREG2Q8NC44 543 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 WASF1Q92558 559 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 UBAC1Q9BSL1 405 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 SUGCTQ9HAC7 445 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 TCP11L1Q9NUJ3 509 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 LMCD1Q9NZU5 365 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 FBXO40Q9UH90 709 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 SLC12A7Q9Y666 1083 aa12.47□□□□□ -0.41
MRPS28-208ENST00000521605 CCDC69A6NI79 296 aa12.46□□□□□ -0.41
MRPS28-208ENST00000521605 H3BQV1 296 aa12.46□□□□□ -0.41
MRPS28-208ENST00000521605 CPLX1O14810 134 aa12.46□□□□□ -0.41
MRPS28-208ENST00000521605 PRPF40AO75400 957 aaKnown RBP12.46□□□□□ -0.41
MRPS28-208ENST00000521605 DDAH1O94760 285 aa12.46□□□□□ -0.41
MRPS28-208ENST00000521605 MYL3P08590 195 aa12.46□□□□□ -0.41
MRPS28-208ENST00000521605 IQCF3P0C7M6 154 aa12.46□□□□□ -0.41
MRPS28-208ENST00000521605 NCLP19338 710 aaKnown RBP12.46□□□□□ -0.41
MRPS28-208ENST00000521605 RFC2P35250 354 aa12.46□□□□□ -0.41
MRPS28-208ENST00000521605 ZNF445P59923 1031 aa12.46□□□□□ -0.41
MRPS28-208ENST00000521605 RESTQ13127 1097 aa12.46□□□□□ -0.41
MRPS28-208ENST00000521605 NTRK3Q16288 839 aa12.46□□□□□ -0.41
MRPS28-208ENST00000521605 CHST3Q7LGC8 479 aa12.46□□□□□ -0.41
MRPS28-208ENST00000521605 FAM177A1Q8N128 213 aaPredicted RBP12.46□□□□□ -0.41
MRPS28-208ENST00000521605 FBXO18Q8NFZ0 1043 aa12.46□□□□□ -0.41
MRPS28-208ENST00000521605 SYAP1Q96A49 352 aaPredicted RBP12.46□□□□□ -0.41
MRPS28-208ENST00000521605 ZSCAN10Q96SZ4 725 aaPredicted RBP12.46□□□□□ -0.41
MRPS28-208ENST00000521605 CFAP45Q9UL16 551 aa12.46□□□□□ -0.41
MRPS28-208ENST00000521605 PTPRSQ13332 1948 aa12.46□□□□□ -0.42
MRPS28-208ENST00000521605 BAZ2AQ9UIF9 1905 aaKnown RBP12.45□□□□□ -0.42
MRPS28-208ENST00000521605 POTEB3A0JP26 581 aa12.45□□□□□ -0.42
MRPS28-208ENST00000521605 VPS37CA5D8V6 355 aaPredicted RBP12.45□□□□□ -0.42
MRPS28-208ENST00000521605 SOWAHBA6NEL2 793 aa12.45□□□□□ -0.42
MRPS28-208ENST00000521605 MINDY4BA8MYZ0 360 aa12.45□□□□□ -0.42
MRPS28-208ENST00000521605 F5H6K3 240 aa12.45□□□□□ -0.42
MRPS28-208ENST00000521605 RBAK-RBAKDNI3L0D1 243 aa12.45□□□□□ -0.42
MRPS28-208ENST00000521605 ATP2A1O14983 1001 aa12.45□□□□□ -0.42
MRPS28-208ENST00000521605 NDUFB10O96000 172 aa12.45□□□□□ -0.42
MRPS28-208ENST00000521605 FDPSP14324 419 aaKnown RBP12.45□□□□□ -0.42
MRPS28-208ENST00000521605 CHMP4BP1P59074 171 aa12.45□□□□□ -0.42
MRPS28-208ENST00000521605 KLRC3Q07444 240 aa12.45□□□□□ -0.42
MRPS28-208ENST00000521605 L1TD1Q5T7N2 865 aaKnown RBP12.45□□□□□ -0.42
MRPS28-208ENST00000521605 POTEBQ6S5H4 581 aa12.45□□□□□ -0.42
MRPS28-208ENST00000521605 BRAPQ7Z569 592 aa12.45□□□□□ -0.42
MRPS28-208ENST00000521605 DGKHQ86XP1 1220 aa12.45□□□□□ -0.42
MRPS28-208ENST00000521605 STK11IPQ8N1F8 1099 aa12.45□□□□□ -0.42
MRPS28-208ENST00000521605 FAM133AQ8N9E0 248 aa12.45□□□□□ -0.42
MRPS28-208ENST00000521605 CHST13Q8NET6 341 aa12.45□□□□□ -0.42
MRPS28-208ENST00000521605 PRSS33Q8NF86 280 aa12.45□□□□□ -0.42
MRPS28-208ENST00000521605 MFSD14AQ96MC6 490 aa12.45□□□□□ -0.42
MRPS28-208ENST00000521605 RBM28Q9NW13 759 aaKnown RBP12.45□□□□□ -0.42
MRPS28-208ENST00000521605 TANC1Q9C0D5 1861 aa12.44□□□□□ -0.42
MRPS28-208ENST00000521605 ASB14A6NK59 587 aa12.44□□□□□ -0.42
MRPS28-208ENST00000521605 GOLGA8AA7E2F4 631 aa12.44□□□□□ -0.42
MRPS28-208ENST00000521605 HAX1O00165 279 aa12.44□□□□□ -0.42
MRPS28-208ENST00000521605 BAIAP3O94812 1187 aa12.44□□□□□ -0.42
MRPS28-208ENST00000521605 WDR5P61964 334 aaKnown RBP12.44□□□□□ -0.42
MRPS28-208ENST00000521605 CCT2P78371 535 aaKnown RBP12.44□□□□□ -0.42
MRPS28-208ENST00000521605 DEFB103AP81534 67 aa12.44□□□□□ -0.42
MRPS28-208ENST00000521605 FAM117BQ6P1L5 589 aa12.44□□□□□ -0.42
MRPS28-208ENST00000521605 C16orf86Q6ZW13 317 aa12.44□□□□□ -0.42
MRPS28-208ENST00000521605 TGS1Q96RS0 853 aaKnown RBP12.44□□□□□ -0.42
MRPS28-208ENST00000521605 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.44□□□□□ -0.42
MRPS28-208ENST00000521605 ACAD9Q9H845 621 aa12.44□□□□□ -0.42
MRPS28-208ENST00000521605 SLC38A10Q9HBR0 1119 aa12.44□□□□□ -0.42
MRPS28-208ENST00000521605 NCOA5Q9HCD5 579 aaKnown RBP12.44□□□□□ -0.42
MRPS28-208ENST00000521605 A1CFQ9NQ94 594 aaKnown RBP12.44□□□□□ -0.42
MRPS28-208ENST00000521605 GPHNQ9NQX3 736 aaPredicted RBP12.44□□□□□ -0.42
MRPS28-208ENST00000521605 FAM217BQ9NTX9 383 aaPredicted RBP12.44□□□□□ -0.42
MRPS28-208ENST00000521605 ORC3Q9UBD5 711 aaPredicted RBP12.44□□□□□ -0.42
MRPS28-208ENST00000521605 NOD1Q9Y239 953 aa12.44□□□□□ -0.42
MRPS28-208ENST00000521605 CFAP54Q96N23 3096 aa12.44□□□□□ -0.42
MRPS28-208ENST00000521605 LETM1O95202 739 aaPredicted RBP12.43□□□□□ -0.42
MRPS28-208ENST00000521605 DEKP35659 375 aaKnown RBP12.43□□□□□ -0.42
MRPS28-208ENST00000521605 NOVP48745 357 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms