RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 CYB5RLQ6IPT4 315 aa4.88□□□□□ -1.63
VPS13B-209ENST00000521559 RSPO2Q6UXX9 243 aaPredicted RBP4.88□□□□□ -1.63
VPS13B-209ENST00000521559 TTLL7Q6ZT98 887 aa4.88□□□□□ -1.63
VPS13B-209ENST00000521559 MILR1Q7Z6M3 343 aa4.88□□□□□ -1.63
VPS13B-209ENST00000521559 SAPCD2Q86UD0 394 aa4.88□□□□□ -1.63
VPS13B-209ENST00000521559 CCDC103Q8IW40 242 aa4.88□□□□□ -1.63
VPS13B-209ENST00000521559 CELF2-AS1Q8N7Q2 184 aa4.88□□□□□ -1.63
VPS13B-209ENST00000521559 TMEM145Q8NBT3 493 aa4.88□□□□□ -1.63
VPS13B-209ENST00000521559 RCBTB1Q8NDN9 531 aa4.88□□□□□ -1.63
VPS13B-209ENST00000521559 SMARCC2Q8TAQ2 1214 aa4.88□□□□□ -1.63
VPS13B-209ENST00000521559 RELTQ969Z4 430 aa4.88□□□□□ -1.63
VPS13B-209ENST00000521559 ZNF669Q96BR6 464 aaPredicted RBP4.88□□□□□ -1.63
VPS13B-209ENST00000521559 YIPF4Q9BSR8 244 aa4.88□□□□□ -1.63
VPS13B-209ENST00000521559 AARSD1Q9BTE6 412 aaKnown RBP4.88□□□□□ -1.63
VPS13B-209ENST00000521559 PCDHA2Q9Y5H9 948 aa4.88□□□□□ -1.63
VPS13B-209ENST00000521559 KIF21BO75037 1637 aa4.87□□□□□ -1.63
VPS13B-209ENST00000521559 CHD1O14646 1710 aa4.87□□□□□ -1.63
VPS13B-209ENST00000521559 SH3D21A4FU49 640 aa4.87□□□□□ -1.63
VPS13B-209ENST00000521559 FFAR3O14843 346 aa4.87□□□□□ -1.63
VPS13B-209ENST00000521559 SGSM2O43147 1006 aa4.87□□□□□ -1.63
VPS13B-209ENST00000521559 DGKIO75912 1065 aa4.87□□□□□ -1.63
VPS13B-209ENST00000521559 ATP2B1P20020 1258 aa4.87□□□□□ -1.63
VPS13B-209ENST00000521559 MC3RP41968 323 aa4.87□□□□□ -1.63
VPS13B-209ENST00000521559 RANGAP1P46060 587 aaPredicted RBP4.87□□□□□ -1.63
VPS13B-209ENST00000521559 HTRA3P83110 453 aa4.87□□□□□ -1.63
VPS13B-209ENST00000521559 NFIXQ14938 502 aa4.87□□□□□ -1.63
VPS13B-209ENST00000521559 PRSS53Q2L4Q9 553 aa4.87□□□□□ -1.63
VPS13B-209ENST00000521559 SLC35F1Q5T1Q4 408 aa4.87□□□□□ -1.63
VPS13B-209ENST00000521559 NBPF6Q5VWK0 638 aa4.87□□□□□ -1.63
VPS13B-209ENST00000521559 MIB1Q86YT6 1006 aa4.87□□□□□ -1.63
VPS13B-209ENST00000521559 NBPF4Q96M43 638 aa4.87□□□□□ -1.63
VPS13B-209ENST00000521559 BCAS3Q9H6U6 928 aa4.87□□□□□ -1.63
VPS13B-209ENST00000521559 GPR27Q9NS67 375 aa4.87□□□□□ -1.63
VPS13B-209ENST00000521559 CLDND1Q9NY35 253 aa4.87□□□□□ -1.63
VPS13B-209ENST00000521559 RTEL1Q9NZ71 1219 aa4.87□□□□□ -1.63
VPS13B-209ENST00000521559 TMEFF2Q9UIK5 374 aaPredicted RBP4.87□□□□□ -1.63
VPS13B-209ENST00000521559 SIT1Q9Y3P8 196 aa4.87□□□□□ -1.63
VPS13B-209ENST00000521559 NPFFR2Q9Y5X5 522 aa4.87□□□□□ -1.63
VPS13B-209ENST00000521559 KRIT1O00522 736 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 HGSO14964 777 aaPredicted RBP4.86□□□□□ -1.63
VPS13B-209ENST00000521559 PLA2G1BP04054 148 aaKnown RBP4.86□□□□□ -1.63
VPS13B-209ENST00000521559 CAPNS1P04632 268 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 FGFR1P11362 822 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 FPR2P25090 351 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 SLURP1P55000 103 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 SF1Q15637 639 aaKnown RBP4.86□□□□□ -1.63
VPS13B-209ENST00000521559 VWA3BQ502W6 1294 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 LIPIQ6XZB0 460 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 FAM126BQ8IXS8 530 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 TTLL6Q8N841 843 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 TP53I13Q8NBR0 393 aaPredicted RBP4.86□□□□□ -1.63
VPS13B-209ENST00000521559 C1orf159Q96HA4 380 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 C8orf37Q96NL8 207 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 IER2Q9BTL4 223 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 TANGO6Q9C0B7 1094 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 XYLT2Q9H1B5 865 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 EPB41L1Q9H4G0 881 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 NTMQ9P121 344 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 PALD1Q9ULE6 856 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 PLA2G2DQ9UNK4 145 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 ZNF652Q9Y2D9 606 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 NUB1Q9Y5A7 615 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 PTPRGP23470 1445 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 UGGT2Q9NYU1 1516 aa4.86□□□□□ -1.63
VPS13B-209ENST00000521559 TRAV20A0A0B4J274 112 aa4.85□□□□□ -1.63
VPS13B-209ENST00000521559 OTOL1A6NHN0 477 aaPredicted RBP4.85□□□□□ -1.63
VPS13B-209ENST00000521559 SARSP49591 514 aaKnown RBP4.85□□□□□ -1.63
VPS13B-209ENST00000521559 NKX3-2P78367 333 aa4.85□□□□□ -1.63
VPS13B-209ENST00000521559 STEAP3Q658P3 488 aa4.85□□□□□ -1.63
VPS13B-209ENST00000521559 CD300LDQ6UXZ3 194 aa4.85□□□□□ -1.63
VPS13B-209ENST00000521559 USP53Q70EK8 1073 aa4.85□□□□□ -1.63
VPS13B-209ENST00000521559 FRMD5Q7Z6J6 570 aa4.85□□□□□ -1.63
VPS13B-209ENST00000521559 NLRP10Q86W26 655 aa4.85□□□□□ -1.63
VPS13B-209ENST00000521559 LINC00482Q8N8I6 264 aa4.85□□□□□ -1.63
VPS13B-209ENST00000521559 PHOSPHO1Q8TCT1 267 aa4.85□□□□□ -1.63
VPS13B-209ENST00000521559 DCAF4Q8WV16 495 aa4.85□□□□□ -1.63
VPS13B-209ENST00000521559 ZBTB8AQ96BR9 441 aa4.85□□□□□ -1.63
VPS13B-209ENST00000521559 TEPSINQ96N21 525 aa4.85□□□□□ -1.63
VPS13B-209ENST00000521559 IPO9Q96P70 1041 aaKnown RBP4.85□□□□□ -1.63
VPS13B-209ENST00000521559 ZFYVE21Q9BQ24 234 aa4.85□□□□□ -1.63
VPS13B-209ENST00000521559 HIRIP3Q9BW71 556 aaPredicted RBP4.85□□□□□ -1.63
VPS13B-209ENST00000521559 USP40Q9NVE5 1235 aa4.85□□□□□ -1.63
VPS13B-209ENST00000521559 TTBK1Q5TCY1 1321 aaPredicted RBP4.85□□□□□ -1.63
VPS13B-209ENST00000521559 ARHGEF11O15085 1522 aa4.85□□□□□ -1.63
VPS13B-209ENST00000521559 IQGAP2Q13576 1575 aa4.85□□□□□ -1.63
VPS13B-209ENST00000521559 DISP1Q96F81 1524 aa4.84□□□□□ -1.63
VPS13B-209ENST00000521559 B8ZZF3 427 aa4.84□□□□□ -1.63
VPS13B-209ENST00000521559 ARNTLO00327 626 aa4.84□□□□□ -1.63
VPS13B-209ENST00000521559 PRODHO43272 600 aa4.84□□□□□ -1.63
VPS13B-209ENST00000521559 DLX3O60479 287 aa4.84□□□□□ -1.63
VPS13B-209ENST00000521559 C8BP07358 591 aa4.84□□□□□ -1.63
VPS13B-209ENST00000521559 SYN1P17600 705 aa4.84□□□□□ -1.63
VPS13B-209ENST00000521559 GRIA2P42262 883 aa4.84□□□□□ -1.63
VPS13B-209ENST00000521559 IFRD2Q12894 506 aaPredicted RBP4.84□□□□□ -1.63
VPS13B-209ENST00000521559 EMC4Q5J8M3 183 aa4.84□□□□□ -1.63
VPS13B-209ENST00000521559 DENND5AQ6IQ26 1287 aa4.84□□□□□ -1.63
VPS13B-209ENST00000521559 CYP4F22Q6NT55 531 aa4.84□□□□□ -1.63
VPS13B-209ENST00000521559 NSMFQ6X4W1 530 aa4.84□□□□□ -1.63
VPS13B-209ENST00000521559 TRIM48Q8IWZ4 208 aa4.84□□□□□ -1.63
VPS13B-209ENST00000521559 CARFQ8N187 725 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms