RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 ZNF552Q9H707 407 aaPredicted RBP7.39□□□□□ -1.23
SKP1-208ENST00000521216 SIRT5Q9NXA8 310 aa7.39□□□□□ -1.23
SKP1-208ENST00000521216 PALD1Q9ULE6 856 aa7.39□□□□□ -1.23
SKP1-208ENST00000521216 B4E1Z4 1266 aa7.38□□□□□ -1.23
SKP1-208ENST00000521216 NKRFO15226 690 aaKnown RBP eCLIP7.38□□□□□ -1.231e-7■□□□□ 8.2
SKP1-208ENST00000521216 SGSM2O43147 1006 aa7.38□□□□□ -1.23
SKP1-208ENST00000521216 MYCLP1P12525 358 aaPredicted RBP7.38□□□□□ -1.23
SKP1-208ENST00000521216 VIPR1P32241 457 aa7.38□□□□□ -1.23
SKP1-208ENST00000521216 CRY1Q16526 586 aa7.38□□□□□ -1.23
SKP1-208ENST00000521216 ABHD17CQ6PCB6 329 aa7.38□□□□□ -1.23
SKP1-208ENST00000521216 EP400NLQ6ZTU2 488 aa7.38□□□□□ -1.23
SKP1-208ENST00000521216 UBE2R2Q712K3 238 aaPredicted RBP7.38□□□□□ -1.23
SKP1-208ENST00000521216 OTOP3Q7RTS5 596 aa7.38□□□□□ -1.23
SKP1-208ENST00000521216 DDX53Q86TM3 631 aaKnown RBP7.38□□□□□ -1.23
SKP1-208ENST00000521216 OSTM1Q86WC4 334 aa7.38□□□□□ -1.23
SKP1-208ENST00000521216 RBM12BQ8IXT5 1001 aaKnown RBP7.38□□□□□ -1.23
SKP1-208ENST00000521216 FAM177A1Q8N128 213 aaPredicted RBP7.38□□□□□ -1.23
SKP1-208ENST00000521216 CISD2Q8N5K1 135 aaKnown RBP7.38□□□□□ -1.23
SKP1-208ENST00000521216 SEC14L1Q92503 715 aa7.38□□□□□ -1.23
SKP1-208ENST00000521216 SAMD15Q9P1V8 674 aa7.38□□□□□ -1.23
SKP1-208ENST00000521216 SBNO2Q9Y2G9 1366 aa7.37□□□□□ -1.23
SKP1-208ENST00000521216 SLC27A2O14975 620 aa7.37□□□□□ -1.23
SKP1-208ENST00000521216 MAFKO60675 156 aa7.37□□□□□ -1.23
SKP1-208ENST00000521216 PDE6AP16499 860 aa7.37□□□□□ -1.23
SKP1-208ENST00000521216 SLC6A11P48066 632 aa7.37□□□□□ -1.23
SKP1-208ENST00000521216 YBX1P67809 324 aaKnown RBP7.37□□□□□ -1.23
SKP1-208ENST00000521216 ZNF200P98182 395 aaPredicted RBP7.37□□□□□ -1.23
SKP1-208ENST00000521216 CFAP100Q494V2 611 aa7.37□□□□□ -1.23
SKP1-208ENST00000521216 PIK3R6Q5UE93 754 aa7.37□□□□□ -1.23
SKP1-208ENST00000521216 ZCCHC8Q6NZY4 707 aaKnown RBP7.37□□□□□ -1.23
SKP1-208ENST00000521216 ZNF662Q6ZS27 426 aa7.37□□□□□ -1.23
SKP1-208ENST00000521216 C16orf59Q7L2K0 433 aa7.37□□□□□ -1.23
SKP1-208ENST00000521216 LRRTM3Q86VH5 581 aa7.37□□□□□ -1.23
SKP1-208ENST00000521216 ALG3Q92685 438 aa7.37□□□□□ -1.23
SKP1-208ENST00000521216 SLC6A20Q9NP91 592 aa7.37□□□□□ -1.23
SKP1-208ENST00000521216 INTS7Q9NVH2 962 aaKnown RBP7.37□□□□□ -1.23
SKP1-208ENST00000521216 CBLCQ9ULV8 474 aa7.37□□□□□ -1.23
SKP1-208ENST00000521216 PCDHB4Q9Y5E5 795 aa7.37□□□□□ -1.23
SKP1-208ENST00000521216 KPNA6O60684 536 aa7.36□□□□□ -1.23
SKP1-208ENST00000521216 ZBTB7AO95365 584 aa7.36□□□□□ -1.23
SKP1-208ENST00000521216 CKMP06732 381 aa7.36□□□□□ -1.23
SKP1-208ENST00000521216 KCNA6P17658 529 aa7.36□□□□□ -1.23
SKP1-208ENST00000521216 SLC9A5Q14940 896 aa7.36□□□□□ -1.23
SKP1-208ENST00000521216 TM4SF20Q53R12 229 aa7.36□□□□□ -1.23
SKP1-208ENST00000521216 ARHGAP36Q6ZRI8 547 aa7.36□□□□□ -1.23
SKP1-208ENST00000521216 WNK4Q96J92 1243 aa7.36□□□□□ -1.23
SKP1-208ENST00000521216 TARS2Q9BW92 718 aaKnown RBP7.36□□□□□ -1.23
SKP1-208ENST00000521216 SGPP1Q9BX95 441 aa7.36□□□□□ -1.23
SKP1-208ENST00000521216 MYOTQ9UBF9 498 aa7.36□□□□□ -1.23
SKP1-208ENST00000521216 DSEQ9UL01 958 aa7.36□□□□□ -1.23
SKP1-208ENST00000521216 M0R2C6 588 aa7.35□□□□□ -1.23
SKP1-208ENST00000521216 KCNK3O14649 394 aa7.35□□□□□ -1.23
SKP1-208ENST00000521216 WNT9AO14904 365 aa7.35□□□□□ -1.23
SKP1-208ENST00000521216 NCKAP1LP55160 1127 aa7.35□□□□□ -1.23
SKP1-208ENST00000521216 JAM2P57087 298 aa7.35□□□□□ -1.23
SKP1-208ENST00000521216 GPR19Q15760 415 aa7.35□□□□□ -1.23
SKP1-208ENST00000521216 CDCA2Q69YH5 1023 aaPredicted RBP7.35□□□□□ -1.23
SKP1-208ENST00000521216 PANK1Q8TE04 598 aa7.35□□□□□ -1.23
SKP1-208ENST00000521216 KCNN1Q92952 543 aa7.35□□□□□ -1.23
SKP1-208ENST00000521216 YIPF4Q9BSR8 244 aa7.35□□□□□ -1.23
SKP1-208ENST00000521216 CELF4Q9BZC1 486 aaKnown RBP7.35□□□□□ -1.23
SKP1-208ENST00000521216 CD244Q9BZW8 370 aa7.35□□□□□ -1.23
SKP1-208ENST00000521216 MCOLN1Q9GZU1 580 aa7.35□□□□□ -1.23
SKP1-208ENST00000521216 SMOC1Q9H4F8 434 aa7.35□□□□□ -1.23
SKP1-208ENST00000521216 RNF114Q9Y508 228 aa7.35□□□□□ -1.23
SKP1-208ENST00000521216 LOC100996750A0A140TA64 210 aa7.34□□□□□ -1.23
SKP1-208ENST00000521216 MYOCOSA0A1B0GUC4 107 aa7.34□□□□□ -1.23
SKP1-208ENST00000521216 PDE8AO60658 829 aa7.34□□□□□ -1.23
SKP1-208ENST00000521216 TADA3O75528 432 aa7.34□□□□□ -1.23
SKP1-208ENST00000521216 GLRX3O76003 335 aaKnown RBP7.34□□□□□ -1.23
SKP1-208ENST00000521216 GRIN1Q05586 938 aa7.34□□□□□ -1.23
SKP1-208ENST00000521216 TMEM177Q53S58 311 aa7.34□□□□□ -1.23
SKP1-208ENST00000521216 PTRH1Q86Y79 214 aaKnown RBP7.34□□□□□ -1.23
SKP1-208ENST00000521216 C2orf69Q8N8R5 385 aa7.34□□□□□ -1.23
SKP1-208ENST00000521216 FBXO15Q8NCQ5 510 aaPredicted RBP7.34□□□□□ -1.23
SKP1-208ENST00000521216 DDX1Q92499 740 aaKnown RBP7.34□□□□□ -1.23
SKP1-208ENST00000521216 TSPAN17Q96FV3 270 aa7.34□□□□□ -1.23
SKP1-208ENST00000521216 KRTAP4-6Q9BYQ5 205 aa7.34□□□□□ -1.23
SKP1-208ENST00000521216 PLA2G2DQ9UNK4 145 aa7.34□□□□□ -1.23
SKP1-208ENST00000521216 ZNF652Q9Y2D9 606 aa7.34□□□□□ -1.23
SKP1-208ENST00000521216 NUB1Q9Y5A7 615 aa7.34□□□□□ -1.23
SKP1-208ENST00000521216 TCRBV5S4A2TA0A5A2 114 aa7.33□□□□□ -1.24
SKP1-208ENST00000521216 HRKO00198 91 aa7.33□□□□□ -1.24
SKP1-208ENST00000521216 PEX10O60683 326 aa7.33□□□□□ -1.24
SKP1-208ENST00000521216 NPTXRO95502 500 aa7.33□□□□□ -1.24
SKP1-208ENST00000521216 LTFP02788 710 aa7.33□□□□□ -1.24
SKP1-208ENST00000521216 MASP1P48740 699 aa7.33□□□□□ -1.24
SKP1-208ENST00000521216 EMC4Q5J8M3 183 aa7.33□□□□□ -1.24
SKP1-208ENST00000521216 OVCH1Q7RTY7 1134 aa7.33□□□□□ -1.24
SKP1-208ENST00000521216 ARRDC4Q8NCT1 418 aa7.33□□□□□ -1.24
SKP1-208ENST00000521216 CABP5Q9NP86 173 aa7.33□□□□□ -1.24
SKP1-208ENST00000521216 TCRBV5S2A0A599 114 aa7.32□□□□□ -1.24
SKP1-208ENST00000521216 PAX4O43316 350 aa7.32□□□□□ -1.24
SKP1-208ENST00000521216 KRT37O76014 449 aa7.32□□□□□ -1.24
SKP1-208ENST00000521216 AMY2AP04746 511 aa7.32□□□□□ -1.24
SKP1-208ENST00000521216 AMY2BP19961 511 aa7.32□□□□□ -1.24
SKP1-208ENST00000521216 PMLP29590 882 aa7.32□□□□□ -1.24
SKP1-208ENST00000521216 TUSC3Q13454 348 aa7.32□□□□□ -1.24
SKP1-208ENST00000521216 PCBP1Q15365 356 aaKnown RBP eCLIP7.32□□□□□ -1.24
SKP1-208ENST00000521216 HABP4Q5JVS0 413 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms