RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 TUBB4AP04350 444 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 SPDYE6P0CI01 402 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 KIF5AQ12840 1032 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 COASYQ13057 564 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 ADAM9Q13443 819 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 SPAG5Q96R06 1193 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 HINFPQ9BQA5 517 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 EHD4Q9H223 541 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 EHMT1Q9H9B1 1298 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 BLOC1S4Q9NUP1 217 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 SEPT11Q9NVA2 429 aaKnown RBP12.6□□□□□ -0.39
CLK4-206ENST00000520878 PIM2Q9P1W9 311 aa12.6□□□□□ -0.39
CLK4-206ENST00000520878 CETN3O15182 167 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 CLIC2O15247 247 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 KLRC4O43908 158 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 PRPF6O94906 941 aaKnown RBP12.59□□□□□ -0.39
CLK4-206ENST00000520878 FOSP01100 380 aaPredicted RBP12.59□□□□□ -0.39
CLK4-206ENST00000520878 PPP1R2P41236 205 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 HDLBPQ00341 1268 aaKnown RBP12.59□□□□□ -0.39
CLK4-206ENST00000520878 RAPGEF1Q13905 1077 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 PDIA5Q14554 519 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 PPP1R18Q6NYC8 613 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 CCDC155Q8N6L0 562 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 LRRC15Q8TF66 581 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 CCDC51Q96ER9 411 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 SH2D3AQ9BRG2 576 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 NDST4Q9H3R1 872 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 SH2D4AQ9H788 454 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 TNRC6CQ9HCJ0 1690 aaKnown RBP12.59□□□□□ -0.39
CLK4-206ENST00000520878 RNF225M0QZC1 329 aaPredicted RBP12.59□□□□□ -0.39
CLK4-206ENST00000520878 TBX2Q13207 712 aaPredicted RBP12.59□□□□□ -0.39
CLK4-206ENST00000520878 RASA3Q14644 834 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 TNIP1Q15025 636 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 TTI2Q6NXR4 508 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 EMILIN3Q9NT22 766 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 KRT86O43790 486 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 USO1O60763 962 aaKnown RBP12.59□□□□□ -0.39
CLK4-206ENST00000520878 FXR2P51116 673 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLK4-206ENST00000520878 KRT83P78385 493 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 JAG1P78504 1218 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 DALRD3Q5D0E6 543 aaKnown RBP12.59□□□□□ -0.39
CLK4-206ENST00000520878 KIAA0895Q8NCT3 520 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 MTMR9Q96QG7 549 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLK4-206ENST00000520878 TRIM10Q9UDY6 481 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 ZNRF3Q9ULT6 936 aa12.59□□□□□ -0.39
CLK4-206ENST00000520878 NDUFA10O95299 355 aa12.58□□□□□ -0.4
CLK4-206ENST00000520878 GTF2F1P35269 517 aaKnown RBP eCLIP12.58□□□□□ -0.4
CLK4-206ENST00000520878 TRAF1Q13077 416 aa12.58□□□□□ -0.4
CLK4-206ENST00000520878 HAS1Q92839 578 aa12.58□□□□□ -0.4
CLK4-206ENST00000520878 JAKMIP2Q96AA8 810 aa12.58□□□□□ -0.4
CLK4-206ENST00000520878 TAOK3Q9H2K8 898 aa12.58□□□□□ -0.4
CLK4-206ENST00000520878 HERC5Q9UII4 1024 aaKnown RBP12.58□□□□□ -0.4
CLK4-206ENST00000520878 CHD4Q14839 1912 aa12.58□□□□□ -0.4
CLK4-206ENST00000520878 MYH6P13533 1939 aa12.58□□□□□ -0.4
CLK4-206ENST00000520878 A0A0U1RQG5 324 aaPredicted RBP12.58□□□□□ -0.4
CLK4-206ENST00000520878 SNHG28P0DPA3 235 aa12.58□□□□□ -0.4
CLK4-206ENST00000520878 FKBP3Q00688 224 aaKnown RBP12.58□□□□□ -0.4
CLK4-206ENST00000520878 CXCL9Q07325 125 aa12.58□□□□□ -0.4
CLK4-206ENST00000520878 PPP4R3AQ6IN85 833 aa12.58□□□□□ -0.4
CLK4-206ENST00000520878 SAMD7Q7Z3H4 446 aa12.58□□□□□ -0.4
CLK4-206ENST00000520878 GLIS2Q9BZE0 524 aaPredicted RBP12.58□□□□□ -0.4
CLK4-206ENST00000520878 SEMA6BQ9H3T3 888 aa12.58□□□□□ -0.4
CLK4-206ENST00000520878 MRPL11Q9Y3B7 192 aaKnown RBP12.58□□□□□ -0.4
CLK4-206ENST00000520878 RABGAP1Q9Y3P9 1069 aa12.58□□□□□ -0.4
CLK4-206ENST00000520878 POLR3GO15318 223 aaPredicted RBP12.58□□□□□ -0.4
CLK4-206ENST00000520878 NR2F2P24468 414 aa12.58□□□□□ -0.4
CLK4-206ENST00000520878 ECM1Q16610 540 aa12.58□□□□□ -0.4
CLK4-206ENST00000520878 FBXO38Q6PIJ6 1188 aa12.58□□□□□ -0.4
CLK4-206ENST00000520878 FAM151AQ8WW52 585 aa12.58□□□□□ -0.4
CLK4-206ENST00000520878 NAPGQ99747 312 aaPredicted RBP12.58□□□□□ -0.4
CLK4-206ENST00000520878 NUP58Q9BVL2 599 aa12.58□□□□□ -0.4
CLK4-206ENST00000520878 IGKV6D-41A0A0C4DH26 115 aa12.57□□□□□ -0.4
CLK4-206ENST00000520878 SHTN1A0MZ66 631 aa12.57□□□□□ -0.4
CLK4-206ENST00000520878 MED24O75448 989 aa12.57□□□□□ -0.4
CLK4-206ENST00000520878 USP11P51784 963 aa12.57□□□□□ -0.4
CLK4-206ENST00000520878 POLR2FP61218 127 aaKnown RBP12.57□□□□□ -0.4
CLK4-206ENST00000520878 PSMC6P62333 389 aa12.57□□□□□ -0.4
CLK4-206ENST00000520878 ERVK-24P63145 666 aa12.57□□□□□ -0.4
CLK4-206ENST00000520878 ZNF771Q7L3S4 317 aaPredicted RBP12.57□□□□□ -0.4
CLK4-206ENST00000520878 KRT26Q7Z3Y9 468 aa12.57□□□□□ -0.4
CLK4-206ENST00000520878 DUSP9Q99956 384 aaKnown RBP12.57□□□□□ -0.4
CLK4-206ENST00000520878 ZNF577Q9BSK1 485 aa12.57□□□□□ -0.4
CLK4-206ENST00000520878 PVALEFA0A1B0GWK0 134 aa12.57□□□□□ -0.4
CLK4-206ENST00000520878 AP3B2Q13367 1082 aa12.57□□□□□ -0.4
CLK4-206ENST00000520878 RRP1BQ14684 758 aaKnown RBP12.57□□□□□ -0.4
CLK4-206ENST00000520878 VWA3BQ502W6 1294 aa12.57□□□□□ -0.4
CLK4-206ENST00000520878 CCDC181Q5TID7 509 aa12.57□□□□□ -0.4
CLK4-206ENST00000520878 IRF2BP1Q8IU81 584 aa12.57□□□□□ -0.4
CLK4-206ENST00000520878 HOOK2Q96ED9 719 aa12.57□□□□□ -0.4
CLK4-206ENST00000520878 LSM14BQ9BX40 385 aaKnown RBP12.57□□□□□ -0.4
CLK4-206ENST00000520878 RAVER2Q9HCJ3 691 aaKnown RBP12.57□□□□□ -0.4
CLK4-206ENST00000520878 PHLPP2Q6ZVD8 1323 aa12.57□□□□□ -0.4
CLK4-206ENST00000520878 CTAGE15A4D2H0 777 aa12.57□□□□□ -0.4
CLK4-206ENST00000520878 CTAGE8P0CG41 777 aa12.57□□□□□ -0.4
CLK4-206ENST00000520878 CHMP4BP1P59074 171 aa12.57□□□□□ -0.4
CLK4-206ENST00000520878 CTAGE6Q86UF2 777 aa12.57□□□□□ -0.4
CLK4-206ENST00000520878 SFR1Q86XK3 245 aa12.57□□□□□ -0.4
CLK4-206ENST00000520878 CTAGE4Q8IX94 777 aa12.57□□□□□ -0.4
CLK4-206ENST00000520878 GOLGA1Q92805 767 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms