RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 MROH7Q68CQ1 1323 aa18.64■□□□□ 0.57
TNPO1-212ENST00000520850 ALPK3Q96L96 1907 aa18.63■□□□□ 0.57
TNPO1-212ENST00000520850 A0A0U1RQG5 324 aaPredicted RBP18.63■□□□□ 0.57
TNPO1-212ENST00000520850 ARVCFO00192 962 aa18.63■□□□□ 0.57
TNPO1-212ENST00000520850 PPFIA4O75335 1185 aa18.63■□□□□ 0.57
TNPO1-212ENST00000520850 CYP3A4P08684 503 aa18.63■□□□□ 0.57
TNPO1-212ENST00000520850 RTP1P59025 263 aa18.63■□□□□ 0.57
TNPO1-212ENST00000520850 IRX5P78411 483 aaPredicted RBP18.63■□□□□ 0.57
TNPO1-212ENST00000520850 PURAQ00577 322 aaKnown RBP18.63■□□□□ 0.57
TNPO1-212ENST00000520850 BEX3Q00994 111 aa18.63■□□□□ 0.57
TNPO1-212ENST00000520850 PPTC7Q8NI37 304 aa18.63■□□□□ 0.57
TNPO1-212ENST00000520850 WASF1Q92558 559 aa18.63■□□□□ 0.57
TNPO1-212ENST00000520850 TBC1D32Q96NH3 1257 aa18.63■□□□□ 0.57
TNPO1-212ENST00000520850 ANO3Q9BYT9 981 aa18.63■□□□□ 0.57
TNPO1-212ENST00000520850 JADE2Q9NQC1 790 aa18.63■□□□□ 0.57
TNPO1-212ENST00000520850 CTDNEP1O95476 244 aa18.62■□□□□ 0.57
TNPO1-212ENST00000520850 XBP1P17861 261 aa18.62■□□□□ 0.57
TNPO1-212ENST00000520850 ATN1P54259 1190 aaPredicted RBP18.62■□□□□ 0.57
TNPO1-212ENST00000520850 SP2Q02086 613 aa18.62■□□□□ 0.57
TNPO1-212ENST00000520850 NIPA1Q7RTP0 329 aa18.62■□□□□ 0.57
TNPO1-212ENST00000520850 DHX37Q8IY37 1157 aaKnown RBP18.62■□□□□ 0.57
TNPO1-212ENST00000520850 REXO1Q8N1G1 1221 aaKnown RBP18.62■□□□□ 0.57
TNPO1-212ENST00000520850 DAGLBQ8NCG7 672 aa18.62■□□□□ 0.57
TNPO1-212ENST00000520850 COPS5Q92905 334 aa18.62■□□□□ 0.57
TNPO1-212ENST00000520850 MTG1Q9BT17 334 aaPredicted RBP18.62■□□□□ 0.57
TNPO1-212ENST00000520850 SH2B1Q9NRF2 756 aaPredicted RBP18.62■□□□□ 0.57
TNPO1-212ENST00000520850 H0YGN5 161 aa18.61■□□□□ 0.57
TNPO1-212ENST00000520850 ITGB5P18084 799 aa18.61■□□□□ 0.57
TNPO1-212ENST00000520850 DGKDQ16760 1214 aa18.61■□□□□ 0.57
TNPO1-212ENST00000520850 CXCL17Q6UXB2 119 aa18.61■□□□□ 0.57
TNPO1-212ENST00000520850 MXRA8Q9BRK3 442 aa18.61■□□□□ 0.57
TNPO1-212ENST00000520850 LLPHQ9BRT6 129 aaKnown RBP18.61■□□□□ 0.57
TNPO1-212ENST00000520850 RTEL1Q9NZ71 1219 aa18.61■□□□□ 0.57
TNPO1-212ENST00000520850 PCDHA4Q9UN74 947 aa18.61■□□□□ 0.57
TNPO1-212ENST00000520850 M0R2N6 131 aa18.6■□□□□ 0.57
TNPO1-212ENST00000520850 MEIS1O00470 390 aa18.6■□□□□ 0.57
TNPO1-212ENST00000520850 MMP3P08254 477 aa18.6■□□□□ 0.57
TNPO1-212ENST00000520850 UBA1P22314 1058 aaKnown RBP18.6■□□□□ 0.57
TNPO1-212ENST00000520850 USP11P51784 963 aa18.6■□□□□ 0.57
TNPO1-212ENST00000520850 NLRP5P59047 1200 aa18.6■□□□□ 0.57
TNPO1-212ENST00000520850 PTPN11Q06124 597 aaPredicted RBP18.6■□□□□ 0.57
TNPO1-212ENST00000520850 SEMA3FQ13275 785 aa18.6■□□□□ 0.57
TNPO1-212ENST00000520850 ITGA7Q13683 1181 aa18.6■□□□□ 0.57
TNPO1-212ENST00000520850 CEP55Q53EZ4 464 aa18.6■□□□□ 0.57
TNPO1-212ENST00000520850 METTL7BQ6UX53 244 aa18.6■□□□□ 0.57
TNPO1-212ENST00000520850 AFG1LQ8WV93 481 aa18.6■□□□□ 0.57
TNPO1-212ENST00000520850 VPS54Q9P1Q0 977 aa18.6■□□□□ 0.57
TNPO1-212ENST00000520850 GRIN2DO15399 1336 aa18.59■□□□□ 0.57
TNPO1-212ENST00000520850 DCDC2CA8MYV0 355 aa18.59■□□□□ 0.57
TNPO1-212ENST00000520850 ST18O60284 1047 aa18.59■□□□□ 0.57
TNPO1-212ENST00000520850 GGPS1O95749 300 aa18.59■□□□□ 0.57
TNPO1-212ENST00000520850 FDPSP14324 419 aaKnown RBP18.59■□□□□ 0.57
TNPO1-212ENST00000520850 PTGS1P23219 599 aa18.59■□□□□ 0.57
TNPO1-212ENST00000520850 CIITAP33076 1130 aa18.59■□□□□ 0.57
TNPO1-212ENST00000520850 MCM2P49736 904 aa18.59■□□□□ 0.57
TNPO1-212ENST00000520850 ARHGAP4P98171 946 aa18.59■□□□□ 0.57
TNPO1-212ENST00000520850 TLE2Q04725 743 aa18.59■□□□□ 0.57
TNPO1-212ENST00000520850 MTMR1Q13613 665 aa18.59■□□□□ 0.57
TNPO1-212ENST00000520850 TRIM60Q495X7 471 aa18.59■□□□□ 0.57
TNPO1-212ENST00000520850 NFRKBQ6P4R8 1299 aa18.59■□□□□ 0.57
TNPO1-212ENST00000520850 C7orf61Q8IZ16 206 aa18.59■□□□□ 0.57
TNPO1-212ENST00000520850 NECAB1Q8N987 351 aa18.59■□□□□ 0.57
TNPO1-212ENST00000520850 NSUN7Q8NE18 718 aaKnown RBP18.59■□□□□ 0.57
TNPO1-212ENST00000520850 VTI1AQ96AJ9 217 aa18.59■□□□□ 0.57
TNPO1-212ENST00000520850 MLXIPQ9HAP2 919 aa18.59■□□□□ 0.57
TNPO1-212ENST00000520850 ORC3Q9UBD5 711 aaPredicted RBP18.59■□□□□ 0.57
TNPO1-212ENST00000520850 LARGE1O95461 756 aa18.58■□□□□ 0.56
TNPO1-212ENST00000520850 BMP8BP34820 402 aa18.58■□□□□ 0.56
TNPO1-212ENST00000520850 NPY5RQ15761 445 aa18.58■□□□□ 0.56
TNPO1-212ENST00000520850 JAKMIP3Q5VZ66 844 aa18.58■□□□□ 0.56
TNPO1-212ENST00000520850 SESTD1Q86VW0 696 aa18.58■□□□□ 0.56
TNPO1-212ENST00000520850 BLIDQ8IZY5 108 aa18.58■□□□□ 0.56
TNPO1-212ENST00000520850 SPATA33Q96N06 139 aa18.58■□□□□ 0.56
TNPO1-212ENST00000520850 PHF20Q9BVI0 1012 aa18.58■□□□□ 0.56
TNPO1-212ENST00000520850 KCNH7Q9NS40 1196 aa18.58■□□□□ 0.56
TNPO1-212ENST00000520850 TMEM260Q9NX78 707 aa18.58■□□□□ 0.56
TNPO1-212ENST00000520850 ATP11BQ9Y2G3 1177 aa18.58■□□□□ 0.56
TNPO1-212ENST00000520850 SCN10AQ9Y5Y9 1956 aa18.57■□□□□ 0.56
TNPO1-212ENST00000520850 MYH7BA7E2Y1 1941 aa18.57■□□□□ 0.56
TNPO1-212ENST00000520850 KIAA0355O15063 1070 aa18.57■□□□□ 0.56
TNPO1-212ENST00000520850 PPFIA3O75145 1194 aa18.57■□□□□ 0.56
TNPO1-212ENST00000520850 CD4P01730 458 aa18.57■□□□□ 0.56
TNPO1-212ENST00000520850 MYL3P08590 195 aa18.57■□□□□ 0.56
TNPO1-212ENST00000520850 KCNA2P16389 499 aa18.57■□□□□ 0.56
TNPO1-212ENST00000520850 FAAP100Q0VG06 881 aa18.57■□□□□ 0.56
TNPO1-212ENST00000520850 HSDL1Q3SXM5 330 aa18.57■□□□□ 0.56
TNPO1-212ENST00000520850 FAM126BQ8IXS8 530 aa18.57■□□□□ 0.56
TNPO1-212ENST00000520850 KATNAL1Q9BW62 490 aa18.57■□□□□ 0.56
TNPO1-212ENST00000520850 PRKAG2Q9UGJ0 569 aa18.57■□□□□ 0.56
TNPO1-212ENST00000520850 NFASCO94856 1347 aa18.56■□□□□ 0.56
TNPO1-212ENST00000520850 HAS3O00219 553 aa18.56■□□□□ 0.56
TNPO1-212ENST00000520850 TLR3O15455 904 aaKnown RBP18.56■□□□□ 0.56
TNPO1-212ENST00000520850 CLTBP09497 229 aa18.56■□□□□ 0.56
TNPO1-212ENST00000520850 CYFIP1Q7L576 1253 aa18.56■□□□□ 0.56
TNPO1-212ENST00000520850 ZFP91Q96JP5 570 aaPredicted RBP18.56■□□□□ 0.56
TNPO1-212ENST00000520850 GDF15Q99988 308 aa18.56■□□□□ 0.56
TNPO1-212ENST00000520850 PRO3102Q9H379 93 aa18.56■□□□□ 0.56
TNPO1-212ENST00000520850 IGLV3-22A0A075B6J6 115 aa18.55■□□□□ 0.56
TNPO1-212ENST00000520850 ADAMTS3O15072 1205 aa18.55■□□□□ 0.56
TNPO1-212ENST00000520850 ATP9AO75110 1047 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms