RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 NOX5Q96PH1 765 aa11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 ARHGAP20Q9P2F6 1191 aa11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 ARPP21Q9UBL0 812 aaPredicted RBP11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 TNKSO95271 1327 aa11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 IGHMBP2P38935 993 aaKnown RBP11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 RHBDL3P58872 404 aa11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 CACNB1Q02641 598 aaPredicted RBP11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 EAPPQ56P03 285 aaPredicted RBP11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 ANKRD40Q6AI12 368 aa11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 LCORLQ8N3X6 602 aa11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 TMEM87BQ96K49 555 aa11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 EPB41L4AQ9HCS5 686 aaPredicted RBP11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 PANK4Q9NVE7 773 aa11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 ANKIB1Q9P2G1 1089 aa11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 LMTK2Q8IWU2 1503 aa11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 PEAK1Q9H792 1746 aa11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 PXDNLA1KZ92 1463 aa11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 IPO5O00410 1097 aaKnown RBP11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 RASSF9O75901 435 aa11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 ZFYP08048 801 aaPredicted RBP11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 KCNJ2P63252 427 aa11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 ZNF658Q5TYW1 1059 aaPredicted RBP11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 NELFCDQ8IXH7 590 aa11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 ADAMTS1Q9UHI8 967 aa11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 AMACRQ9UHK6 382 aa11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 CAPN11Q9UMQ6 739 aa11.06□□□□□ -0.64
PDGFRB-207ENST00000520579 TUBGCP6Q96RT7 1819 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 JCADQ9P266 1359 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 GTPBP6O43824 516 aaPredicted RBP11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 PCK1P35558 622 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 HSD17B3P37058 310 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 DNM2P50570 870 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 POLE2P56282 527 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 MAP3K12Q12852 859 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 RASA3Q14644 834 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 KIAA0753Q2KHM9 967 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 IFIT1BQ5T764 474 aaKnown RBP11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 KDM7AQ6ZMT4 941 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 LPIN2Q92539 896 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 BABAM1Q9NWV8 329 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 NCAPD2Q15021 1401 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 MYH13Q9UKX3 1938 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 ABCC6O95255 1503 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 hCG_2014768A0A024R1R8 64 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 ATP6V1G2O95670 118 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 TCP1P17987 556 aaKnown RBP11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 RNASELQ05823 741 aaKnown RBP11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 MRRFQ96E11 262 aaKnown RBP11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 TRIM51Q9BSJ1 452 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 TLR10Q9BXR5 811 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 ADAM33Q9BZ11 813 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 FOXP1Q9H334 677 aaPredicted RBP11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 CPDO75976 1380 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 H7C1D1 291 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 ADD2P35612 726 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 STK4Q13043 487 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 SEPT14Q6ZU15 432 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 ANKLE2Q86XL3 938 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 RBM12BQ8IXT5 1001 aaKnown RBP11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 AGAP11Q8TF27 550 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 SHISA4Q96DD7 197 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 FAM81BQ96LP2 452 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 KCNK9Q9NPC2 374 aa11.05□□□□□ -0.64
PDGFRB-207ENST00000520579 TMEM110-MUSTN1A8MSY1 372 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 SHBGP04278 402 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 EPS15P42566 896 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 POLR2FP61218 127 aaKnown RBP11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 NT5DC1Q5TFE4 455 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 DAAM2Q86T65 1068 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 ARFGAP2Q8N6H7 521 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 TMCO5AQ8N6Q1 288 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 GDAP1Q8TB36 358 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 SPAG5Q96R06 1193 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 NUP58Q9BVL2 599 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 SH2D4AQ9H788 454 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 RHBDL2Q9NX52 303 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 SPATA7Q9P0W8 599 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 GOLGA6L10A0A0M3HER8 536 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 GCP02774 474 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 ITGA4P13612 1032 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 MMGT1Q8N4V1 131 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 GREM2Q9H772 168 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 ITM2BQ9Y287 266 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 PFDN1O60925 122 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 YY1P25490 414 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 ELF3P78545 371 aaPredicted RBP11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 SKOR1P84550 965 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 CUL3Q13618 768 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 Q4G0T1 1027 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 CATIPQ7Z7H3 387 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 CCDC197Q8NCU1 140 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 ORAI2Q96SN7 254 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 NEUROG2Q9H2A3 272 aa11.04□□□□□ -0.64
PDGFRB-207ENST00000520579 CCDC194A0A1B0GVG4 234 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 A0A1B0GVG6 124 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 SPDYE3A6NKU9 549 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 NBPF26B4DH59 902 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 CREB3O43889 395 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 MARCH6O60337 910 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 KLRC1P26715 233 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms