RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 PEX11GQ96HA9 241 aa7.44□□□□□ -1.22
LINC00535-204ENST00000520513 TEPSINQ96N21 525 aa7.44□□□□□ -1.22
LINC00535-204ENST00000520513 SPATA25Q9BR10 227 aa7.44□□□□□ -1.22
LINC00535-204ENST00000520513 FANCLQ9NW38 375 aa7.44□□□□□ -1.22
LINC00535-204ENST00000520513 SPATA6Q9NWH7 488 aaPredicted RBP7.44□□□□□ -1.22
LINC00535-204ENST00000520513 BTG4Q9NY30 223 aa7.44□□□□□ -1.22
LINC00535-204ENST00000520513 LRP2BPQ9P2M1 347 aa7.44□□□□□ -1.22
LINC00535-204ENST00000520513 NUDT5Q9UKK9 219 aa7.44□□□□□ -1.22
LINC00535-204ENST00000520513 FAN1Q9Y2M0 1017 aa7.44□□□□□ -1.22
LINC00535-204ENST00000520513 PTCH2Q9Y6C5 1203 aa7.44□□□□□ -1.22
LINC00535-204ENST00000520513 ANKRD62A6NC57 917 aa7.43□□□□□ -1.22
LINC00535-204ENST00000520513 ADCY3O60266 1144 aa7.43□□□□□ -1.22
LINC00535-204ENST00000520513 LCP1P13796 627 aa7.43□□□□□ -1.22
LINC00535-204ENST00000520513 GRIA2P42262 883 aa7.43□□□□□ -1.22
LINC00535-204ENST00000520513 SQSTM1Q13501 440 aa7.43□□□□□ -1.22
LINC00535-204ENST00000520513 HSP90AA2PQ14568 343 aaPredicted RBP7.43□□□□□ -1.22
LINC00535-204ENST00000520513 SKOR2Q2VWA4 1001 aaPredicted RBP7.43□□□□□ -1.22
LINC00535-204ENST00000520513 C16orf86Q6ZW13 317 aa7.43□□□□□ -1.22
LINC00535-204ENST00000520513 FAM26EQ8N5C1 309 aa7.43□□□□□ -1.22
LINC00535-204ENST00000520513 CPA5Q8WXQ8 436 aa7.43□□□□□ -1.22
LINC00535-204ENST00000520513 C1orf159Q96HA4 380 aa7.43□□□□□ -1.22
LINC00535-204ENST00000520513 SLKQ9H2G2 1235 aaPredicted RBP7.43□□□□□ -1.22
LINC00535-204ENST00000520513 A0A1W2PQU0 124 aa7.42□□□□□ -1.22
LINC00535-204ENST00000520513 ESYT3A0FGR9 886 aa7.42□□□□□ -1.22
LINC00535-204ENST00000520513 SH3D21A4FU49 640 aa7.42□□□□□ -1.22
LINC00535-204ENST00000520513 C22orf46C9J442 243 aa7.42□□□□□ -1.22
LINC00535-204ENST00000520513 PRICKLE3O43900 615 aaPredicted RBP7.42□□□□□ -1.22
LINC00535-204ENST00000520513 SCG5P05408 212 aa7.42□□□□□ -1.22
LINC00535-204ENST00000520513 ECI1P42126 302 aa7.42□□□□□ -1.22
LINC00535-204ENST00000520513 CACNB2Q08289 660 aaPredicted RBP7.42□□□□□ -1.22
LINC00535-204ENST00000520513 FRMD5Q7Z6J6 570 aa7.42□□□□□ -1.22
LINC00535-204ENST00000520513 KIAA0907Q7Z7F0 614 aaPredicted RBP7.42□□□□□ -1.22
LINC00535-204ENST00000520513 DDX11Q96FC9 970 aa7.42□□□□□ -1.22
LINC00535-204ENST00000520513 PUS7Q96PZ0 661 aaKnown RBP7.42□□□□□ -1.22
LINC00535-204ENST00000520513 FEZ1Q99689 392 aa7.42□□□□□ -1.22
LINC00535-204ENST00000520513 KANSL2Q9H9L4 492 aa7.42□□□□□ -1.22
LINC00535-204ENST00000520513 SBNO2Q9Y2G9 1366 aa7.42□□□□□ -1.22
LINC00535-204ENST00000520513 TRAV20A0A0B4J274 112 aa7.41□□□□□ -1.22
LINC00535-204ENST00000520513 FAM153BP0C7A2 387 aa7.41□□□□□ -1.22
LINC00535-204ENST00000520513 BCL6P41182 706 aa7.41□□□□□ -1.22
LINC00535-204ENST00000520513 KCNC1P48547 511 aa7.41□□□□□ -1.22
LINC00535-204ENST00000520513 SLC9A5Q14940 896 aa7.41□□□□□ -1.22
LINC00535-204ENST00000520513 TCEA2Q15560 299 aa7.41□□□□□ -1.22
LINC00535-204ENST00000520513 Q8N1Y9 231 aa7.41□□□□□ -1.22
LINC00535-204ENST00000520513 RCBTB1Q8NDN9 531 aa7.41□□□□□ -1.22
LINC00535-204ENST00000520513 GORASP1Q9BQQ3 440 aa7.41□□□□□ -1.22
LINC00535-204ENST00000520513 AARSD1Q9BTE6 412 aaKnown RBP7.41□□□□□ -1.22
LINC00535-204ENST00000520513 ZBTB7AO95365 584 aa7.4□□□□□ -1.22
LINC00535-204ENST00000520513 SNRPB2P08579 225 aaKnown RBP7.4□□□□□ -1.22
LINC00535-204ENST00000520513 FGFR1P11362 822 aa7.4□□□□□ -1.22
LINC00535-204ENST00000520513 GFRA1P56159 465 aa7.4□□□□□ -1.22
LINC00535-204ENST00000520513 PPP2R2AP63151 447 aa7.4□□□□□ -1.22
LINC00535-204ENST00000520513 RNF187Q5TA31 235 aaPredicted RBP7.4□□□□□ -1.22
LINC00535-204ENST00000520513 TMEM145Q8NBT3 493 aa7.4□□□□□ -1.22
LINC00535-204ENST00000520513 IPO9Q96P70 1041 aaKnown RBP7.4□□□□□ -1.22
LINC00535-204ENST00000520513 ARHGEF4Q9NR80 690 aa7.4□□□□□ -1.22
LINC00535-204ENST00000520513 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.4□□□□□ -1.22
LINC00535-204ENST00000520513 PRKAB1Q9Y478 270 aa7.4□□□□□ -1.22
LINC00535-204ENST00000520513 CELA3BP08861 270 aa7.39□□□□□ -1.23
LINC00535-204ENST00000520513 HMGB1P09429 215 aaKnown RBP7.39□□□□□ -1.23
LINC00535-204ENST00000520513 HOXC12P31275 282 aa7.39□□□□□ -1.23
LINC00535-204ENST00000520513 SMAD4Q13485 552 aaKnown RBP7.39□□□□□ -1.23
LINC00535-204ENST00000520513 TESK1Q15569 626 aa7.39□□□□□ -1.23
LINC00535-204ENST00000520513 SCUBE1Q8IWY4 988 aa7.39□□□□□ -1.23
LINC00535-204ENST00000520513 DIO2Q92813 273 aa7.39□□□□□ -1.23
LINC00535-204ENST00000520513 CDC6Q99741 560 aa7.39□□□□□ -1.23
LINC00535-204ENST00000520513 PALD1Q9ULE6 856 aa7.39□□□□□ -1.23
LINC00535-204ENST00000520513 PLAAQ9Y263 795 aa7.39□□□□□ -1.23
LINC00535-204ENST00000520513 TIMM13Q9Y5L4 95 aaPredicted RBP7.39□□□□□ -1.23
LINC00535-204ENST00000520513 DUSP10Q9Y6W6 482 aa7.39□□□□□ -1.23
LINC00535-204ENST00000520513 X6R8D5 127 aa7.39□□□□□ -1.23
LINC00535-204ENST00000520513 SLC35F1Q5T1Q4 408 aa7.38□□□□□ -1.23
LINC00535-204ENST00000520513 E4F1Q66K89 784 aaPredicted RBP7.38□□□□□ -1.23
LINC00535-204ENST00000520513 CEP68Q76N32 757 aa7.38□□□□□ -1.23
LINC00535-204ENST00000520513 STK32CQ86UX6 486 aa7.38□□□□□ -1.23
LINC00535-204ENST00000520513 MIB1Q86YT6 1006 aa7.38□□□□□ -1.23
LINC00535-204ENST00000520513 DCP2Q8IU60 420 aaKnown RBP7.38□□□□□ -1.23
LINC00535-204ENST00000520513 CARFQ8N187 725 aa7.38□□□□□ -1.23
LINC00535-204ENST00000520513 LINC00482Q8N8I6 264 aa7.38□□□□□ -1.23
LINC00535-204ENST00000520513 CCDC140Q96MF4 163 aa7.38□□□□□ -1.23
LINC00535-204ENST00000520513 NOBOXO60393 691 aa7.37□□□□□ -1.23
LINC00535-204ENST00000520513 RPL11P62913 178 aaKnown RBP7.37□□□□□ -1.23
LINC00535-204ENST00000520513 RTP5Q14D33 572 aa7.37□□□□□ -1.23
LINC00535-204ENST00000520513 ACBD5Q5T8D3 534 aaPredicted RBP7.37□□□□□ -1.23
LINC00535-204ENST00000520513 NT5DC1Q5TFE4 455 aa7.37□□□□□ -1.23
LINC00535-204ENST00000520513 ZNF662Q6ZS27 426 aa7.37□□□□□ -1.23
LINC00535-204ENST00000520513 PPIL6Q8IXY8 311 aa7.37□□□□□ -1.23
LINC00535-204ENST00000520513 KISS1RQ969F8 398 aaPredicted RBP7.37□□□□□ -1.23
LINC00535-204ENST00000520513 ZBTB8AQ96BR9 441 aa7.37□□□□□ -1.23
LINC00535-204ENST00000520513 DHRS4Q9BTZ2 278 aa7.37□□□□□ -1.23
LINC00535-204ENST00000520513 CDIP1Q9H305 208 aa7.37□□□□□ -1.23
LINC00535-204ENST00000520513 TRBV23-1A0A0A0MS06 115 aa7.36□□□□□ -1.23
LINC00535-204ENST00000520513 PPP1R12AO14974 1030 aaPredicted RBP7.36□□□□□ -1.23
LINC00535-204ENST00000520513 MEFVO15553 781 aaPredicted RBP7.36□□□□□ -1.23
LINC00535-204ENST00000520513 STAT5AP42229 794 aa7.36□□□□□ -1.23
LINC00535-204ENST00000520513 SLC6A11P48066 632 aa7.36□□□□□ -1.23
LINC00535-204ENST00000520513 SUMO1P63165 101 aaKnown RBP7.36□□□□□ -1.23
LINC00535-204ENST00000520513 IQCEQ6IPM2 695 aa7.36□□□□□ -1.23
LINC00535-204ENST00000520513 FERMT3Q86UX7 667 aa7.36□□□□□ -1.23
LINC00535-204ENST00000520513 RIOX2Q8IUF8 465 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms