RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 ANKRD1Q15327 319 aa5.3□□□□□ -1.56
PABPC1-212ENST00000519622 TAF1CQ15572 869 aaPredicted RBP5.3□□□□□ -1.56
PABPC1-212ENST00000519622 MAP3K11Q16584 847 aa5.3□□□□□ -1.56
PABPC1-212ENST00000519622 LDLRAD1Q5T700 205 aa5.3□□□□□ -1.56
PABPC1-212ENST00000519622 NAA16Q6N069 864 aaPredicted RBP5.3□□□□□ -1.56
PABPC1-212ENST00000519622 KIF6Q6ZMV9 814 aa5.3□□□□□ -1.56
PABPC1-212ENST00000519622 CYB5R4Q7L1T6 521 aa5.3□□□□□ -1.56
PABPC1-212ENST00000519622 FERMT3Q86UX7 667 aa5.3□□□□□ -1.56
PABPC1-212ENST00000519622 ZSCAN30Q86W11 494 aa5.3□□□□□ -1.56
PABPC1-212ENST00000519622 LINC00116Q8NCU8 138 aa5.3□□□□□ -1.56
PABPC1-212ENST00000519622 RNF214Q8ND24 703 aa5.3□□□□□ -1.56
PABPC1-212ENST00000519622 ENGASEQ8NFI3 743 aa5.3□□□□□ -1.56
PABPC1-212ENST00000519622 SHISA4Q96DD7 197 aa5.3□□□□□ -1.56
PABPC1-212ENST00000519622 FAM46AQ96IP4 442 aaKnown RBP5.3□□□□□ -1.56
PABPC1-212ENST00000519622 NEUROD6Q96NK8 337 aa5.3□□□□□ -1.56
PABPC1-212ENST00000519622 CORO1BQ9BR76 489 aa5.3□□□□□ -1.56
PABPC1-212ENST00000519622 RUSC1Q9BVN2 902 aa5.3□□□□□ -1.56
PABPC1-212ENST00000519622 CEP44Q9C0F1 390 aa5.3□□□□□ -1.56
PABPC1-212ENST00000519622 KIAA1522Q9P206 1035 aaPredicted RBP5.3□□□□□ -1.56
PABPC1-212ENST00000519622 STOML1Q9UBI4 398 aa5.3□□□□□ -1.56
PABPC1-212ENST00000519622 NOL7Q9UMY1 257 aaKnown RBP5.3□□□□□ -1.56
PABPC1-212ENST00000519622 MRVI1Q9Y6F6 885 aa5.3□□□□□ -1.56
PABPC1-212ENST00000519622 MYH13Q9UKX3 1938 aa5.3□□□□□ -1.56
PABPC1-212ENST00000519622 UBR3Q6ZT12 1888 aa5.3□□□□□ -1.56
PABPC1-212ENST00000519622 CDK5RAP2Q96SN8 1893 aa5.3□□□□□ -1.56
PABPC1-212ENST00000519622 KIF28PB7ZC32 967 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 SMIM22K7EJ46 135 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 SH2B2O14492 632 aaPredicted RBP5.29□□□□□ -1.56
PABPC1-212ENST00000519622 GPAA1O43292 621 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 STARD3NLO95772 234 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 TGFB1P01137 390 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 IGLV1-40P01703 118 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 CYP11A1P05108 521 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 ZFYP08048 801 aaPredicted RBP5.29□□□□□ -1.56
PABPC1-212ENST00000519622 GSTP1P09211 210 aaKnown RBP5.29□□□□□ -1.56
PABPC1-212ENST00000519622 PDE6AP16499 860 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 NME2P22392 152 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 CD97P48960 835 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 EVA1CP58658 441 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 IFIT5Q13325 482 aaKnown RBP5.29□□□□□ -1.56
PABPC1-212ENST00000519622 ALX1Q15699 326 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 NTRK3Q16288 839 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 TSNAXIP1Q2TAA8 658 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 CCDC57Q2TAC2 916 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 PCNX4Q63HM2 1172 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 LARP1BQ659C4 914 aaKnown RBP5.29□□□□□ -1.56
PABPC1-212ENST00000519622 GIMAP6Q6P9H5 292 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 SV2BQ7L1I2 683 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 CHST3Q7LGC8 479 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 PDZD3Q86UT5 571 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 DDX11Q96FC9 970 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 ZNF274Q96GC6 653 aaPredicted RBP5.29□□□□□ -1.56
PABPC1-212ENST00000519622 KCNF1Q9H3M0 494 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 CLSTN2Q9H4D0 955 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 CBX8Q9HC52 389 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 RCOR1Q9UKL0 485 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 ZKSCAN5Q9Y2L8 839 aa5.29□□□□□ -1.56
PABPC1-212ENST00000519622 THRAP3Q9Y2W1 955 aaKnown RBP5.29□□□□□ -1.56
PABPC1-212ENST00000519622 MROH7-TTC4A0A0A0MT08 1334 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 CNTNAP4Q9C0A0 1308 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 HMX2A2RU54 273 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 UBE2Q2LH0YL09 131 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 KCNQ2O43526 872 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 RANBP6O60518 1105 aaKnown RBP5.28□□□□□ -1.56
PABPC1-212ENST00000519622 OFD1O75665 1012 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 BMP6P22004 513 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 KCNJ4P48050 445 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 ST13P50502 369 aaKnown RBP5.28□□□□□ -1.56
PABPC1-212ENST00000519622 HAND2P61296 217 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 SNW1Q13573 536 aaKnown RBP5.28□□□□□ -1.56
PABPC1-212ENST00000519622 UBE3CQ15386 1083 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 UVSSAQ2YD98 709 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 METTL24Q5JXM2 366 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 TTC39AQ5SRH9 613 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 SMIM5Q71RC9 77 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 ADGRA1Q86SQ6 560 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 TRIM42Q8IWZ5 723 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 GRIN3AQ8TCU5 1115 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 USP28Q96RU2 1077 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 STRBPQ96SI9 672 aaKnown RBP5.28□□□□□ -1.56
PABPC1-212ENST00000519622 KRTAP4-12Q9BQ66 201 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 RNF208Q9H0X6 261 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 CCDC86Q9H6F5 360 aaKnown RBP5.28□□□□□ -1.56
PABPC1-212ENST00000519622 C7orf69Q9H7B7 122 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 GJB4Q9NTQ9 266 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 PCMTD2Q9NV79 361 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 USP25Q9UHP3 1055 aa5.28□□□□□ -1.56
PABPC1-212ENST00000519622 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.28□□□□□ -1.561e-56■■■■■ 40.3
PABPC1-212ENST00000519622 BAZ2AQ9UIF9 1905 aaKnown RBP5.28□□□□□ -1.56
PABPC1-212ENST00000519622 PNPLA7Q6ZV29 1317 aa5.27□□□□□ -1.57
PABPC1-212ENST00000519622 ZNF532Q9HCE3 1301 aa5.27□□□□□ -1.57
PABPC1-212ENST00000519622 ANKRD18BA2A2Z9 1011 aa5.27□□□□□ -1.57
PABPC1-212ENST00000519622 GSG1L2A8MUP6 293 aa5.27□□□□□ -1.57
PABPC1-212ENST00000519622 EXOC5O00471 708 aa5.27□□□□□ -1.57
PABPC1-212ENST00000519622 DHX15O43143 795 aaKnown RBP5.27□□□□□ -1.57
PABPC1-212ENST00000519622 PRC1O43663 620 aa5.27□□□□□ -1.57
PABPC1-212ENST00000519622 ADAMTS4O75173 837 aa5.27□□□□□ -1.57
PABPC1-212ENST00000519622 HMGB1P09429 215 aaKnown RBP5.27□□□□□ -1.57
PABPC1-212ENST00000519622 PDCP20941 246 aa5.27□□□□□ -1.57
PABPC1-212ENST00000519622 ARNTP27540 789 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms