RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 ZNF174Q15697 407 aa16.01■□□□□ 0.15
SDC2-203ENST00000519587 CALCRLQ16602 461 aa16.01■□□□□ 0.15
SDC2-203ENST00000519587 FOXD4L6Q3SYB3 417 aaPredicted RBP16.01■□□□□ 0.15
SDC2-203ENST00000519587 FOXD4L3Q6VB84 417 aaPredicted RBP16.01■□□□□ 0.15
SDC2-203ENST00000519587 SEPT14Q6ZU15 432 aa16.01■□□□□ 0.15
SDC2-203ENST00000519587 EEPD1Q7L9B9 569 aa16.01■□□□□ 0.15
SDC2-203ENST00000519587 FBXO16Q8IX29 292 aaPredicted RBP16.01■□□□□ 0.15
SDC2-203ENST00000519587 SLFN12Q8IYM2 578 aa16.01■□□□□ 0.15
SDC2-203ENST00000519587 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.01■□□□□ 0.15
SDC2-203ENST00000519587 FLRT1Q9NZU1 646 aa16.01■□□□□ 0.15
SDC2-203ENST00000519587 ZHX1Q9UKY1 873 aaPredicted RBP16.01■□□□□ 0.15
SDC2-203ENST00000519587 PCDHB6Q9Y5E3 794 aa16.01■□□□□ 0.15
SDC2-203ENST00000519587 SLC37A4O43826 429 aa16■□□□□ 0.15
SDC2-203ENST00000519587 SNAI1O95863 264 aaPredicted RBP16■□□□□ 0.15
SDC2-203ENST00000519587 OR52Z1P0C646 297 aa16■□□□□ 0.15
SDC2-203ENST00000519587 TGFB3P10600 412 aa16■□□□□ 0.15
SDC2-203ENST00000519587 ICAM3P32942 547 aa16■□□□□ 0.15
SDC2-203ENST00000519587 CYP2C19P33261 490 aa16■□□□□ 0.15
SDC2-203ENST00000519587 NASPP49321 788 aaPredicted RBP16■□□□□ 0.15
SDC2-203ENST00000519587 ACVR2BQ13705 512 aa16■□□□□ 0.15
SDC2-203ENST00000519587 NBR1Q14596 966 aa16■□□□□ 0.15
SDC2-203ENST00000519587 TTLL4Q14679 1199 aa16■□□□□ 0.15
SDC2-203ENST00000519587 STK38Q15208 465 aa16■□□□□ 0.15
SDC2-203ENST00000519587 SF3A1Q15459 793 aaKnown RBP16■□□□□ 0.15
SDC2-203ENST00000519587 CSPP1Q1MSJ5 1256 aa16■□□□□ 0.15
SDC2-203ENST00000519587 POTEDQ86YR6 584 aa16■□□□□ 0.15
SDC2-203ENST00000519587 GIMAP8Q8ND71 665 aaPredicted RBP16■□□□□ 0.15
SDC2-203ENST00000519587 KCNG4Q8TDN1 519 aa16■□□□□ 0.15
SDC2-203ENST00000519587 FAM20AQ96MK3 541 aa16■□□□□ 0.15
SDC2-203ENST00000519587 USP28Q96RU2 1077 aa16■□□□□ 0.15
SDC2-203ENST00000519587 SCAND2PQ9GZW5 306 aaPredicted RBP16■□□□□ 0.15
SDC2-203ENST00000519587 KCNH7Q9NS40 1196 aa16■□□□□ 0.15
SDC2-203ENST00000519587 PTPN22Q9Y2R2 807 aa16■□□□□ 0.15
SDC2-203ENST00000519587 PTCH2Q9Y6C5 1203 aa16■□□□□ 0.15
SDC2-203ENST00000519587 SPATA31C2B4DYI2 1134 aa15.99■□□□□ 0.15
SDC2-203ENST00000519587 IPO5O00410 1097 aaKnown RBP15.99■□□□□ 0.15
SDC2-203ENST00000519587 IGHA2P01877 340 aa15.99■□□□□ 0.15
SDC2-203ENST00000519587 ELNP15502 786 aa15.99■□□□□ 0.15
SDC2-203ENST00000519587 GRK4P32298 578 aa15.99■□□□□ 0.15
SDC2-203ENST00000519587 PRPHP41219 470 aa15.99■□□□□ 0.15
SDC2-203ENST00000519587 ATP2C1P98194 919 aaPredicted RBP15.99■□□□□ 0.15
SDC2-203ENST00000519587 CEBPZQ03701 1054 aaKnown RBP15.99■□□□□ 0.15
SDC2-203ENST00000519587 PTGDRQ13258 359 aa15.99■□□□□ 0.15
SDC2-203ENST00000519587 TMEM266Q2M3C6 531 aa15.99■□□□□ 0.15
SDC2-203ENST00000519587 TNPO1Q92973 898 aaKnown RBP15.99■□□□□ 0.15
SDC2-203ENST00000519587 LENG9Q96B70 501 aa15.99■□□□□ 0.15
SDC2-203ENST00000519587 GBP4Q96PP9 640 aa15.99■□□□□ 0.15
SDC2-203ENST00000519587 SDF4Q9BRK5 362 aa15.99■□□□□ 0.15
SDC2-203ENST00000519587 ZNF577Q9BSK1 485 aa15.99■□□□□ 0.15
SDC2-203ENST00000519587 DDX49Q9Y6V7 483 aaKnown RBP15.99■□□□□ 0.15
SDC2-203ENST00000519587 MORC2Q9Y6X9 1032 aaPredicted RBP15.99■□□□□ 0.15
SDC2-203ENST00000519587 WNT7AO00755 349 aa15.98■□□□□ 0.15
SDC2-203ENST00000519587 NKRFO15226 690 aaKnown RBP eCLIP15.98■□□□□ 0.151e-7■□□□□ 10.9
SDC2-203ENST00000519587 GAS7O60861 476 aa15.98■□□□□ 0.15
SDC2-203ENST00000519587 PRKAR2AP13861 404 aaKnown RBP15.98■□□□□ 0.15
SDC2-203ENST00000519587 NEDD9Q14511 834 aa15.98■□□□□ 0.15
SDC2-203ENST00000519587 SLC9C1Q4G0N8 1177 aa15.98■□□□□ 0.15
SDC2-203ENST00000519587 LRCH2Q5VUJ6 765 aa15.98■□□□□ 0.15
SDC2-203ENST00000519587 ARL6IP4Q66PJ3 421 aaKnown RBP15.98■□□□□ 0.15
SDC2-203ENST00000519587 FBXO46Q6PJ61 603 aaPredicted RBP15.98■□□□□ 0.15
SDC2-203ENST00000519587 CYP2W1Q8TAV3 490 aa15.98■□□□□ 0.15
SDC2-203ENST00000519587 ETNPPLQ8TBG4 499 aa15.98■□□□□ 0.15
SDC2-203ENST00000519587 FERMT2Q96AC1 680 aa15.98■□□□□ 0.15
SDC2-203ENST00000519587 ZFP91Q96JP5 570 aaPredicted RBP15.98■□□□□ 0.15
SDC2-203ENST00000519587 SPATA32Q96LK8 384 aa15.98■□□□□ 0.15
SDC2-203ENST00000519587 RIT2Q99578 217 aa15.98■□□□□ 0.15
SDC2-203ENST00000519587 RAB34Q9BZG1 259 aa15.98■□□□□ 0.15
SDC2-203ENST00000519587 WDR11Q9BZH6 1224 aa15.98■□□□□ 0.15
SDC2-203ENST00000519587 AGO4Q9HCK5 861 aaKnown RBP15.98■□□□□ 0.15
SDC2-203ENST00000519587 KCNMB3Q9NPA1 279 aa15.98■□□□□ 0.15
SDC2-203ENST00000519587 TBC1D22BQ9NU19 505 aa15.98■□□□□ 0.15
SDC2-203ENST00000519587 TFIP11Q9UBB9 837 aaKnown RBP15.98■□□□□ 0.15
SDC2-203ENST00000519587 CLIC4Q9Y696 253 aa15.98■□□□□ 0.15
SDC2-203ENST00000519587 RBM47A0AV96 593 aaKnown RBP15.97■□□□□ 0.15
SDC2-203ENST00000519587 SPTLC2O15270 562 aa15.97■□□□□ 0.15
SDC2-203ENST00000519587 MSH4O15457 936 aa15.97■□□□□ 0.15
SDC2-203ENST00000519587 EDIL3O43854 480 aa15.97■□□□□ 0.15
SDC2-203ENST00000519587 RGS20O76081 388 aa15.97■□□□□ 0.15
SDC2-203ENST00000519587 INHAP05111 366 aa15.97■□□□□ 0.15
SDC2-203ENST00000519587 TXNP10599 105 aaKnown RBP15.97■□□□□ 0.15
SDC2-203ENST00000519587 CYBAP13498 195 aa15.97■□□□□ 0.15
SDC2-203ENST00000519587 AKR1A1P14550 325 aa15.97■□□□□ 0.15
SDC2-203ENST00000519587 SLC39A14Q15043 492 aa15.97■□□□□ 0.15
SDC2-203ENST00000519587 IQSEC1Q6DN90 963 aa15.97■□□□□ 0.15
SDC2-203ENST00000519587 SLC5A5Q92911 643 aa15.97■□□□□ 0.15
SDC2-203ENST00000519587 SENP7Q9BQF6 1050 aa15.97■□□□□ 0.15
SDC2-203ENST00000519587 FTOQ9C0B1 505 aaKnown RBP eCLIP15.97■□□□□ 0.154e-39■■□□□ 12.5
SDC2-203ENST00000519587 KATNBL1Q9H079 304 aa15.97■□□□□ 0.15
SDC2-203ENST00000519587 FAM184BQ9ULE4 1060 aa15.97■□□□□ 0.15
SDC2-203ENST00000519587 DOCK5Q9H7D0 1870 aa15.97■□□□□ 0.15
SDC2-203ENST00000519587 NFASCO94856 1347 aa15.96■□□□□ 0.15
SDC2-203ENST00000519587 ARP10275 920 aa15.96■□□□□ 0.15
SDC2-203ENST00000519587 UBA1P22314 1058 aaKnown RBP15.96■□□□□ 0.15
SDC2-203ENST00000519587 FXR1P51114 621 aaKnown RBP eCLIP15.96■□□□□ 0.15
SDC2-203ENST00000519587 PTPAQ15257 358 aa15.96■□□□□ 0.15
SDC2-203ENST00000519587 CCDC144BQ3MJ40 725 aa15.96■□□□□ 0.15
SDC2-203ENST00000519587 TAPT1Q6NXT6 567 aa15.96■□□□□ 0.15
SDC2-203ENST00000519587 DTHD1Q6ZMT9 781 aa15.96■□□□□ 0.15
SDC2-203ENST00000519587 LINC00301Q8NCQ3 95 aa15.96■□□□□ 0.15
SDC2-203ENST00000519587 MTMR9Q96QG7 549 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms