RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 GTF2A2P52657 109 aa5.02□□□□□ -1.61
CSMD3-209ENST00000519485 EIF6P56537 245 aaKnown RBP5.02□□□□□ -1.61
CSMD3-209ENST00000519485 SCRN1Q12765 414 aa5.02□□□□□ -1.61
CSMD3-209ENST00000519485 TESK1Q15569 626 aa5.02□□□□□ -1.61
CSMD3-209ENST00000519485 CHRNA2Q15822 529 aa5.02□□□□□ -1.61
CSMD3-209ENST00000519485 INF2Q27J81 1249 aa5.02□□□□□ -1.61
CSMD3-209ENST00000519485 E4F1Q66K89 784 aaPredicted RBP5.02□□□□□ -1.61
CSMD3-209ENST00000519485 ZNF585AQ6P3V2 769 aa5.02□□□□□ -1.61
CSMD3-209ENST00000519485 TEX2Q8IWB9 1127 aa5.02□□□□□ -1.61
CSMD3-209ENST00000519485 KBTBD2Q8IY47 623 aa5.02□□□□□ -1.61
CSMD3-209ENST00000519485 ZNF654Q8IZM8 581 aa5.02□□□□□ -1.61
CSMD3-209ENST00000519485 BVESQ8NE79 360 aa5.02□□□□□ -1.61
CSMD3-209ENST00000519485 NPLOC4Q8TAT6 608 aa5.02□□□□□ -1.61
CSMD3-209ENST00000519485 CLIC6Q96NY7 704 aa5.02□□□□□ -1.61
CSMD3-209ENST00000519485 TMEM209Q96SK2 561 aa5.02□□□□□ -1.61
CSMD3-209ENST00000519485 GPRC5CQ9NQ84 441 aa5.02□□□□□ -1.61
CSMD3-209ENST00000519485 PCDHB10Q9UN67 800 aa5.02□□□□□ -1.61
CSMD3-209ENST00000519485 AKT3Q9Y243 479 aa5.02□□□□□ -1.61
CSMD3-209ENST00000519485 SUGT1Q9Y2Z0 365 aa5.02□□□□□ -1.61
CSMD3-209ENST00000519485 STAT5AP42229 794 aa5.01□□□□□ -1.61
CSMD3-209ENST00000519485 MLLT6P55198 1093 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-209ENST00000519485 CASP7P55210 303 aa5.01□□□□□ -1.61
CSMD3-209ENST00000519485 RPL11P62913 178 aaKnown RBP5.01□□□□□ -1.61
CSMD3-209ENST00000519485 RACK1P63244 317 aaKnown RBP5.01□□□□□ -1.61
CSMD3-209ENST00000519485 KLF10Q13118 480 aa5.01□□□□□ -1.61
CSMD3-209ENST00000519485 EMC4Q5J8M3 183 aa5.01□□□□□ -1.61
CSMD3-209ENST00000519485 ZCCHC14Q8WYQ9 949 aaKnown RBP5.01□□□□□ -1.61
CSMD3-209ENST00000519485 TOE1Q96GM8 510 aaKnown RBP5.01□□□□□ -1.61
CSMD3-209ENST00000519485 DTLQ9NZJ0 730 aa5.01□□□□□ -1.61
CSMD3-209ENST00000519485 DDX41Q9UJV9 622 aaKnown RBP5.01□□□□□ -1.61
CSMD3-209ENST00000519485 TIMM13Q9Y5L4 95 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-209ENST00000519485 LOC105371045A0A1W2PR82 267 aa5□□□□□ -1.61
CSMD3-209ENST00000519485 NAT2P11245 290 aa5□□□□□ -1.61
CSMD3-209ENST00000519485 CYP4F3Q08477 520 aa5□□□□□ -1.61
CSMD3-209ENST00000519485 NFATC3Q12968 1075 aa5□□□□□ -1.61
CSMD3-209ENST00000519485 SPDYAQ5MJ70 313 aa5□□□□□ -1.61
CSMD3-209ENST00000519485 NT5DC4Q86YG4 428 aa5□□□□□ -1.61
CSMD3-209ENST00000519485 TRIM59Q8IWR1 403 aa5□□□□□ -1.61
CSMD3-209ENST00000519485 PALM2Q8IXS6 379 aa5□□□□□ -1.61
CSMD3-209ENST00000519485 Q8TCH9 128 aa5□□□□□ -1.61
CSMD3-209ENST00000519485 RASGRP4Q8TDF6 673 aa5□□□□□ -1.61
CSMD3-209ENST00000519485 FRS2Q8WU20 508 aa5□□□□□ -1.61
CSMD3-209ENST00000519485 NKX2-4Q9H2Z4 354 aa5□□□□□ -1.61
CSMD3-209ENST00000519485 SEC61A2Q9H9S3 476 aa5□□□□□ -1.61
CSMD3-209ENST00000519485 BARX1Q9HBU1 254 aaPredicted RBP5□□□□□ -1.61
CSMD3-209ENST00000519485 GINM1Q9NU53 330 aa5□□□□□ -1.61
CSMD3-209ENST00000519485 APEX2Q9UBZ4 518 aa5□□□□□ -1.61
CSMD3-209ENST00000519485 FTSJ1Q9UET6 329 aa5□□□□□ -1.61
CSMD3-209ENST00000519485 ADAM29Q9UKF5 820 aa5□□□□□ -1.61
CSMD3-209ENST00000519485 HS3ST3A1Q9Y663 406 aa5□□□□□ -1.61
CSMD3-209ENST00000519485 UNCXA6NJT0 531 aa4.99□□□□□ -1.61
CSMD3-209ENST00000519485 HGSO14964 777 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-209ENST00000519485 TADA3O75528 432 aa4.99□□□□□ -1.61
CSMD3-209ENST00000519485 KCNH1O95259 989 aa4.99□□□□□ -1.61
CSMD3-209ENST00000519485 FPR2P25090 351 aa4.99□□□□□ -1.61
CSMD3-209ENST00000519485 MIIPQ5JXC2 388 aa4.99□□□□□ -1.61
CSMD3-209ENST00000519485 GTF2IRD2BQ6EKJ0 949 aa4.99□□□□□ -1.61
CSMD3-209ENST00000519485 TEPPQ6URK8 271 aa4.99□□□□□ -1.61
CSMD3-209ENST00000519485 CCDC81Q6ZN84 652 aa4.99□□□□□ -1.61
CSMD3-209ENST00000519485 GTF2IRD2Q86UP8 949 aa4.99□□□□□ -1.61
CSMD3-209ENST00000519485 NLRP10Q86W26 655 aa4.99□□□□□ -1.61
CSMD3-209ENST00000519485 MRGPRX3Q96LB0 322 aa4.99□□□□□ -1.61
CSMD3-209ENST00000519485 APBA2Q99767 749 aa4.99□□□□□ -1.61
CSMD3-209ENST00000519485 YIPF4Q9BSR8 244 aa4.99□□□□□ -1.61
CSMD3-209ENST00000519485 JADE2Q9NQC1 790 aa4.99□□□□□ -1.61
CSMD3-209ENST00000519485 KIAA1522Q9P206 1035 aaPredicted RBP4.99□□□□□ -1.61
CSMD3-209ENST00000519485 TCRBV5S2A0A599 114 aa4.98□□□□□ -1.61
CSMD3-209ENST00000519485 CHGBP05060 677 aa4.98□□□□□ -1.61
CSMD3-209ENST00000519485 COL6A1P12109 1028 aa4.98□□□□□ -1.61
CSMD3-209ENST00000519485 HDLBPQ00341 1268 aaKnown RBP4.98□□□□□ -1.61
CSMD3-209ENST00000519485 PAK2Q13177 524 aa4.98□□□□□ -1.61
CSMD3-209ENST00000519485 CEP68Q76N32 757 aa4.98□□□□□ -1.61
CSMD3-209ENST00000519485 AMER2Q8N7J2 671 aa4.98□□□□□ -1.61
CSMD3-209ENST00000519485 TRMT2BQ96GJ1 504 aaKnown RBP4.98□□□□□ -1.61
CSMD3-209ENST00000519485 BTG4Q9NY30 223 aa4.98□□□□□ -1.61
CSMD3-209ENST00000519485 ING1Q9UK53 422 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-209ENST00000519485 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-209ENST00000519485 H7BY64 318 aa4.97□□□□□ -1.61
CSMD3-209ENST00000519485 NOP56O00567 594 aaKnown RBP4.97□□□□□ -1.61
CSMD3-209ENST00000519485 B4GALT4O60513 344 aa4.97□□□□□ -1.61
CSMD3-209ENST00000519485 LRG1P02750 347 aa4.97□□□□□ -1.61
CSMD3-209ENST00000519485 SCG5P05408 212 aa4.97□□□□□ -1.61
CSMD3-209ENST00000519485 TGFB2P61812 414 aa4.97□□□□□ -1.61
CSMD3-209ENST00000519485 KCNAB2Q13303 367 aa4.97□□□□□ -1.61
CSMD3-209ENST00000519485 ACBD5Q5T8D3 534 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-209ENST00000519485 KIAA1211LQ6NV74 962 aa4.97□□□□□ -1.61
CSMD3-209ENST00000519485 METTL16Q86W50 562 aaKnown RBP4.97□□□□□ -1.61
CSMD3-209ENST00000519485 CCDC103Q8IW40 242 aa4.97□□□□□ -1.61
CSMD3-209ENST00000519485 ARRDC4Q8NCT1 418 aa4.97□□□□□ -1.61
CSMD3-209ENST00000519485 PHOSPHO1Q8TCT1 267 aa4.97□□□□□ -1.61
CSMD3-209ENST00000519485 GPRASP2Q96D09 838 aa4.97□□□□□ -1.61
CSMD3-209ENST00000519485 TMEM169Q96HH4 297 aa4.97□□□□□ -1.61
CSMD3-209ENST00000519485 ZSWIM3Q96MP5 696 aa4.97□□□□□ -1.61
CSMD3-209ENST00000519485 PTPN18Q99952 460 aa4.97□□□□□ -1.61
CSMD3-209ENST00000519485 EFR3BQ9Y2G0 817 aa4.97□□□□□ -1.61
CSMD3-209ENST00000519485 COA3Q9Y2R0 106 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-209ENST00000519485 SLC4A7Q9Y6M7 1214 aa4.97□□□□□ -1.61
CSMD3-209ENST00000519485 ARNTLO00327 626 aa4.96□□□□□ -1.62
CSMD3-209ENST00000519485 MYO1BO43795 1136 aa4.96□□□□□ -1.62
CSMD3-209ENST00000519485 CNOT4O95628 575 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms