RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 ANKRD26Q9UPS8 1709 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 PDE6CP51160 858 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 FIGNQ5HY92 759 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 ALKBH5Q6P6C2 394 aaKnown RBP9.3□□□□□ -0.92
PCM1-212ENST00000519253 CHMP6Q96FZ7 201 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 SLITRK6Q9H5Y7 841 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 AGPAT5Q9NUQ2 364 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 DIS3Q9Y2L1 958 aaKnown RBP9.3□□□□□ -0.92
PCM1-212ENST00000519253 hCG_1984214I3L0E3 225 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 NCK2O43639 380 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 CHRNDQ07001 517 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 ADCY2Q08462 1091 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 ORC2Q13416 577 aaPredicted RBP9.3□□□□□ -0.92
PCM1-212ENST00000519253 COL9A3Q14050 684 aaPredicted RBP9.3□□□□□ -0.92
PCM1-212ENST00000519253 ZNF713Q8N859 430 aaPredicted RBP9.3□□□□□ -0.92
PCM1-212ENST00000519253 FAM133AQ8N9E0 248 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 ERGIC2Q96RQ1 377 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 SMC6Q96SB8 1091 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 PCDHA12Q9UN75 941 aa9.3□□□□□ -0.92
PCM1-212ENST00000519253 NBPF26B4DH59 902 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 SMTNP53814 917 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 NBPF10Q6P3W6 841 aaKnown RBP9.29□□□□□ -0.92
PCM1-212ENST00000519253 FOXR1Q6PIV2 292 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 ARHGAP24Q8N264 748 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 NBPF15Q8N660 670 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 ANKRD42Q8N9B4 389 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 GIMAP8Q8ND71 665 aaPredicted RBP9.29□□□□□ -0.92
PCM1-212ENST00000519253 CEP63Q96MT8 703 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 BATF3Q9NR55 127 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 PASKQ96RG2 1323 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 GYG1P46976 350 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 IFNAR2P48551 515 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 MDM2Q00987 491 aaPredicted RBP9.29□□□□□ -0.92
PCM1-212ENST00000519253 FAM83BQ5T0W9 1011 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 SWT1Q5T5J6 900 aaKnown RBP9.29□□□□□ -0.92
PCM1-212ENST00000519253 PDXDC1Q6P996 788 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 SENP2Q9HC62 589 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 SUFUQ9UMX1 484 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 PLAGL2Q9UPG8 496 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.29□□□□□ -0.92
PCM1-212ENST00000519253 FAM205CA6NFA0 338 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 PLTPP55058 493 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 SF3A3Q12874 501 aaKnown RBP eCLIP9.29□□□□□ -0.921e-6■■□□□ 12.8
PCM1-212ENST00000519253 ZMYND12Q9H0C1 365 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 FRMD3A2A2Y4 597 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 LRRD1A4D1F6 860 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 KRT14P02533 472 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 MAGOHP61326 146 aaKnown RBP9.29□□□□□ -0.92
PCM1-212ENST00000519253 GFPT1Q06210 699 aaPredicted RBP9.29□□□□□ -0.92
PCM1-212ENST00000519253 PPP4R3CPQ6ZMV5 832 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 MGARPQ8TDB4 240 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 MAGOHBQ96A72 148 aaKnown RBP9.29□□□□□ -0.92
PCM1-212ENST00000519253 COL15A1P39059 1388 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 MMEP08473 750 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 ABCB4P21439 1286 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 TBC1D1Q86TI0 1168 aaPredicted RBP9.29□□□□□ -0.92
PCM1-212ENST00000519253 AXIN2Q9Y2T1 843 aa9.29□□□□□ -0.92
PCM1-212ENST00000519253 ADAMTS13Q76LX8 1427 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 RASGRF2O14827 1237 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 AFPP02771 609 aaKnown RBP9.28□□□□□ -0.92
PCM1-212ENST00000519253 NR2F2P24468 414 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 PEX19P40855 299 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 CAVIN3Q969G5 261 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 SGSM3Q96HU1 749 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 RBM12Q9NTZ6 932 aaKnown RBP9.28□□□□□ -0.92
PCM1-212ENST00000519253 ERVV-1B6SEH8 477 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 TRIM9Q9C026 710 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 TYW1Q9NV66 732 aaKnown RBP9.28□□□□□ -0.92
PCM1-212ENST00000519253 EVI5O60447 810 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 SH3BGRP55822 239 aaPredicted RBP9.28□□□□□ -0.92
PCM1-212ENST00000519253 AGBL2Q5U5Z8 902 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 HHATQ5VTY9 493 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 ANKRD40Q6AI12 368 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 ARHGAP27Q6ZUM4 889 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 KIFAP3Q92845 792 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 VTI1AQ96AJ9 217 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 MCUR1Q96AQ8 359 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 CYFIP2Q96F07 1278 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.28□□□□□ -0.923e-7■□□□□ 10.2
PCM1-212ENST00000519253 AP1M1Q9BXS5 423 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 DR1Q01658 176 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 LRRC41Q15345 812 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 CDC37Q16543 378 aaPredicted RBP9.28□□□□□ -0.92
PCM1-212ENST00000519253 PTPROQ16827 1216 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 STAG2Q8N3U4 1231 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 TBCKQ8TEA7 893 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 RNPC3Q96LT9 517 aaKnown RBP9.28□□□□□ -0.92
PCM1-212ENST00000519253 SETDB2Q96T68 719 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 SPZ1Q9BXG8 430 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 PPP1R12CQ9BZL4 782 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 CCDC87Q9NVE4 849 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 DMGDHQ9UI17 866 aaKnown RBP9.28□□□□□ -0.92
PCM1-212ENST00000519253 PCDHB13Q9Y5F0 798 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 MYO1FO00160 1098 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 GCFC2P16383 781 aaKnown RBP9.28□□□□□ -0.92
PCM1-212ENST00000519253 BMP6P22004 513 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 SKOR1P84550 965 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 FAM133BQ5BKY9 247 aaKnown RBP9.28□□□□□ -0.92
PCM1-212ENST00000519253 TPTE2Q6XPS3 522 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 EYA3Q99504 573 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms