RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 INTS4Q96HW7 963 aaKnown RBP6.39□□□□□ -1.39
SQLE-202ENST00000518604 WNK4Q96J92 1243 aa6.39□□□□□ -1.39
SQLE-202ENST00000518604 TARS2Q9BW92 718 aaKnown RBP6.39□□□□□ -1.39
SQLE-202ENST00000518604 JAM3Q9BX67 310 aa6.39□□□□□ -1.39
SQLE-202ENST00000518604 SLC6A20Q9NP91 592 aa6.39□□□□□ -1.39
SQLE-202ENST00000518604 PPARGC1AQ9UBK2 798 aaKnown RBP6.39□□□□□ -1.39
SQLE-202ENST00000518604 CCDC66A2RUB6 948 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 OR14I1A6ND48 311 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 HRKO00198 91 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 ZBTB7AO95365 584 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 NTRK1P04629 796 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 DBHP09172 617 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 JMJD7P0C870 316 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 SRGAP2CP0DJJ0 459 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 GNAT1P11488 350 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 IRAK1P51617 712 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 NEK4P51957 841 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 ZNF460Q14592 562 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 SLC9A5Q14940 896 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 GPR19Q15760 415 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 CRY1Q16526 586 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 ARHGAP44Q17R89 818 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 EMC4Q5J8M3 183 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 SIRT2Q8IXJ6 389 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 IGSF22Q8N9C0 903 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 PHOSPHO1Q8TCT1 267 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 AP5M1Q9H0R1 490 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 CATSPERZQ9NTU4 200 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 SAMD15Q9P1V8 674 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 FBLN5Q9UBX5 448 aa6.38□□□□□ -1.39
SQLE-202ENST00000518604 FAM83GA6ND36 823 aa6.37□□□□□ -1.39
SQLE-202ENST00000518604 BTBD11A6QL63 1104 aa6.37□□□□□ -1.39
SQLE-202ENST00000518604 HGSO14964 777 aaPredicted RBP6.37□□□□□ -1.39
SQLE-202ENST00000518604 PAPLNO95428 1278 aa6.37□□□□□ -1.39
SQLE-202ENST00000518604 OLFML2BQ68BL8 750 aa6.37□□□□□ -1.39
SQLE-202ENST00000518604 ABHD17CQ6PCB6 329 aa6.37□□□□□ -1.39
SQLE-202ENST00000518604 KCNJ15Q99712 375 aa6.37□□□□□ -1.39
SQLE-202ENST00000518604 MTFR1LQ9H019 292 aa6.37□□□□□ -1.39
SQLE-202ENST00000518604 SMOC1Q9H4F8 434 aa6.37□□□□□ -1.39
SQLE-202ENST00000518604 FAM53CQ9NYF3 392 aa6.37□□□□□ -1.39
SQLE-202ENST00000518604 TADA3O75528 432 aa6.36□□□□□ -1.39
SQLE-202ENST00000518604 PYGMP11217 842 aa6.36□□□□□ -1.39
SQLE-202ENST00000518604 IBSPP21815 317 aaPredicted RBP6.36□□□□□ -1.39
SQLE-202ENST00000518604 MAPKAPK2P49137 400 aa6.36□□□□□ -1.39
SQLE-202ENST00000518604 DNM2P50570 870 aa6.36□□□□□ -1.39
SQLE-202ENST00000518604 YBX1P67809 324 aaKnown RBP6.36□□□□□ -1.39
SQLE-202ENST00000518604 TMEM177Q53S58 311 aa6.36□□□□□ -1.39
SQLE-202ENST00000518604 ADGRF1Q5T601 910 aa6.36□□□□□ -1.39
SQLE-202ENST00000518604 PIK3R6Q5UE93 754 aa6.36□□□□□ -1.39
SQLE-202ENST00000518604 STEAP3Q658P3 488 aa6.36□□□□□ -1.39
SQLE-202ENST00000518604 DDX46Q7L014 1031 aaKnown RBP6.36□□□□□ -1.39
SQLE-202ENST00000518604 OVCH1Q7RTY7 1134 aa6.36□□□□□ -1.39
SQLE-202ENST00000518604 RNF180Q86T96 592 aa6.36□□□□□ -1.39
SQLE-202ENST00000518604 TRIM48Q8IWZ4 208 aa6.36□□□□□ -1.39
SQLE-202ENST00000518604 NLGN4XQ8N0W4 816 aa6.36□□□□□ -1.39
SQLE-202ENST00000518604 PDGFDQ9GZP0 370 aaPredicted RBP6.36□□□□□ -1.39
SQLE-202ENST00000518604 CABP5Q9NP86 173 aa6.36□□□□□ -1.39
SQLE-202ENST00000518604 ZNF652Q9Y2D9 606 aa6.36□□□□□ -1.39
SQLE-202ENST00000518604 COQ6Q9Y2Z9 468 aa6.36□□□□□ -1.39
SQLE-202ENST00000518604 F8W031 263 aaPredicted RBP6.35□□□□□ -1.39
SQLE-202ENST00000518604 CBX4O00257 560 aa6.35□□□□□ -1.39
SQLE-202ENST00000518604 PDE6AP16499 860 aa6.35□□□□□ -1.39
SQLE-202ENST00000518604 CPEP16870 476 aa6.35□□□□□ -1.39
SQLE-202ENST00000518604 PDE6BP35913 854 aa6.35□□□□□ -1.39
SQLE-202ENST00000518604 GALK1P51570 392 aa6.35□□□□□ -1.39
SQLE-202ENST00000518604 MECP2P51608 486 aaKnown RBP6.35□□□□□ -1.39
SQLE-202ENST00000518604 RAB3GAP1Q15042 981 aa6.35□□□□□ -1.39
SQLE-202ENST00000518604 PTPROQ16827 1216 aa6.35□□□□□ -1.39
SQLE-202ENST00000518604 ARHGAP36Q6ZRI8 547 aa6.35□□□□□ -1.39
SQLE-202ENST00000518604 UHMK1Q8TAS1 419 aaKnown RBP6.35□□□□□ -1.39
SQLE-202ENST00000518604 PIP4K2CQ8TBX8 421 aa6.35□□□□□ -1.39
SQLE-202ENST00000518604 FAM168AQ92567 244 aa6.35□□□□□ -1.39
SQLE-202ENST00000518604 TSPAN17Q96FV3 270 aa6.35□□□□□ -1.39
SQLE-202ENST00000518604 DBR1Q9UK59 544 aaKnown RBP6.35□□□□□ -1.39
SQLE-202ENST00000518604 DSEQ9UL01 958 aa6.35□□□□□ -1.39
SQLE-202ENST00000518604 CBLCQ9ULV8 474 aa6.35□□□□□ -1.39
SQLE-202ENST00000518604 ZC3H12DA2A288 527 aaKnown RBP6.34□□□□□ -1.39
SQLE-202ENST00000518604 ZNF561-AS1K7EIQ3 104 aa6.34□□□□□ -1.39
SQLE-202ENST00000518604 M0R2C6 588 aa6.34□□□□□ -1.39
SQLE-202ENST00000518604 KPNA6O60684 536 aa6.34□□□□□ -1.39
SQLE-202ENST00000518604 GLRX3O76003 335 aaKnown RBP6.34□□□□□ -1.39
SQLE-202ENST00000518604 COL6A2P12110 1019 aa6.34□□□□□ -1.39
SQLE-202ENST00000518604 SCNN1BP51168 640 aa6.34□□□□□ -1.39
SQLE-202ENST00000518604 PCBP1Q15365 356 aaKnown RBP eCLIP6.34□□□□□ -1.39
SQLE-202ENST00000518604 DHCR24Q15392 516 aa6.34□□□□□ -1.39
SQLE-202ENST00000518604 CT47A1Q5JQC4 288 aaPredicted RBP6.34□□□□□ -1.39
SQLE-202ENST00000518604 HHIPL2Q6UWX4 724 aa6.34□□□□□ -1.39
SQLE-202ENST00000518604 RPTNQ6XPR3 784 aa6.34□□□□□ -1.39
SQLE-202ENST00000518604 OTOP1Q7RTM1 612 aa6.34□□□□□ -1.39
SQLE-202ENST00000518604 OSTM1Q86WC4 334 aa6.34□□□□□ -1.39
SQLE-202ENST00000518604 C2orf69Q8N8R5 385 aa6.34□□□□□ -1.39
SQLE-202ENST00000518604 CHST14Q8NCH0 376 aa6.34□□□□□ -1.39
SQLE-202ENST00000518604 ZNF552Q9H707 407 aaPredicted RBP6.34□□□□□ -1.39
SQLE-202ENST00000518604 KLHL14Q9P2G3 628 aa6.34□□□□□ -1.39
SQLE-202ENST00000518604 B4GALT6Q9UBX8 382 aa6.34□□□□□ -1.39
SQLE-202ENST00000518604 COL4A3BPQ9Y5P4 624 aa6.34□□□□□ -1.39
SQLE-202ENST00000518604 NUDT19A8MXV4 375 aa6.33□□□□□ -1.4
SQLE-202ENST00000518604 TRAF5O00463 557 aa6.33□□□□□ -1.4
SQLE-202ENST00000518604 NKRFO15226 690 aaKnown RBP eCLIP6.33□□□□□ -1.4
SQLE-202ENST00000518604 SGSM2O43147 1006 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms