RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 FAM177A1Q8N128 213 aaPredicted RBP6.72□□□□□ -1.33
CD47-205ENST00000517766 CMTR1Q8N1G2 835 aaKnown RBP6.72□□□□□ -1.33
CD47-205ENST00000517766 NEDD1Q8NHV4 660 aa6.72□□□□□ -1.33
CD47-205ENST00000517766 MRPS27Q92552 414 aaKnown RBP6.72□□□□□ -1.33
CD47-205ENST00000517766 TRIM44Q96DX7 344 aaPredicted RBP6.72□□□□□ -1.33
CD47-205ENST00000517766 MRRFQ96E11 262 aaKnown RBP6.72□□□□□ -1.33
CD47-205ENST00000517766 LZTS2Q9BRK4 669 aa6.72□□□□□ -1.33
CD47-205ENST00000517766 FUCA2Q9BTY2 467 aa6.72□□□□□ -1.33
CD47-205ENST00000517766 PANK2Q9BZ23 570 aa6.72□□□□□ -1.33
CD47-205ENST00000517766 BRMS1Q9HCU9 246 aa6.72□□□□□ -1.33
CD47-205ENST00000517766 DACT1Q9NYF0 836 aa6.72□□□□□ -1.33
CD47-205ENST00000517766 DMGDHQ9UI17 866 aaKnown RBP6.72□□□□□ -1.33
CD47-205ENST00000517766 PCDHA7Q9UN72 937 aa6.72□□□□□ -1.33
CD47-205ENST00000517766 TTF2Q9UNY4 1162 aaKnown RBP6.72□□□□□ -1.33
CD47-205ENST00000517766 CEP131Q9UPN4 1083 aa6.72□□□□□ -1.33
CD47-205ENST00000517766 DAGLAQ9Y4D2 1042 aa6.72□□□□□ -1.33
CD47-205ENST00000517766 GJA3Q9Y6H8 435 aa6.72□□□□□ -1.33
CD47-205ENST00000517766 MYO3BQ8WXR4 1341 aa6.72□□□□□ -1.33
CD47-205ENST00000517766 GREB1LQ9C091 1923 aaPredicted RBP6.72□□□□□ -1.33
CD47-205ENST00000517766 C10orf71Q711Q0 1435 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 KIF28PB7ZC32 967 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 SMIM22K7EJ46 135 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 TREHO43280 583 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 KINO60870 393 aaKnown RBP6.71□□□□□ -1.34
CD47-205ENST00000517766 IGHA2P01877 340 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 KRT2P35908 639 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 CDK8P49336 464 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 FAM160A1Q05DH4 1040 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 EHHADHQ08426 723 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 GRM4Q14833 912 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 SLC39A14Q15043 492 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 SASS6Q6UVJ0 657 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 RIPOR1Q6ZS17 1223 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 BTLAQ7Z6A9 289 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 NOSTRINQ8IVI9 506 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 DIS3L2Q8IYB7 885 aaKnown RBP6.71□□□□□ -1.34
CD47-205ENST00000517766 FSIP1Q8NA03 581 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 TEKT1Q969V4 418 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 CEP63Q96MT8 703 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 AIFM3Q96NN9 605 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 FAM129BQ96TA1 746 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 VPS33BQ9H267 617 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 KIAA1522Q9P206 1035 aaPredicted RBP6.71□□□□□ -1.34
CD47-205ENST00000517766 SWAP70Q9UH65 585 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 NOL7Q9UMY1 257 aaKnown RBP6.71□□□□□ -1.34
CD47-205ENST00000517766 CLIC4Q9Y696 253 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 MORC2Q9Y6X9 1032 aaPredicted RBP6.71□□□□□ -1.34
CD47-205ENST00000517766 ADAMTSL1Q8N6G6 1762 aa6.71□□□□□ -1.34
CD47-205ENST00000517766 PLIN4Q96Q06 1357 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 SNED1Q8TER0 1413 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 ECE2O60344 883 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 CUTAO60888 179 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 BMP15O95972 392 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 HLA-DOAP06340 250 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 CMA1P23946 247 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 CALML3P27482 149 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 SMARCA1P28370 1054 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 GUCY1A2P33402 732 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 NOVP48745 357 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 PLCD1P51178 756 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 KIAA2012Q0VF49 1180 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 ORC1Q13415 861 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 PKN1Q16512 942 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 PFKFB3Q16875 520 aaPredicted RBP6.7□□□□□ -1.34
CD47-205ENST00000517766 HS1BP3Q53T59 392 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 WDR44Q5JSH3 913 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 RCSD1Q6JBY9 416 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 RTKN2Q8IZC4 609 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 GJD3Q8N144 294 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 CERS5Q8N5B7 392 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 TTC16Q8NEE8 873 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 ENGASEQ8NFI3 743 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 PIK3R5Q8WYR1 880 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 DYNLL2Q96FJ2 89 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 ZDHHC15Q96MV8 337 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 TIGD1Q96MW7 591 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 FAM161BQ96MY7 647 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 PHF20Q9BVI0 1012 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 DHX36Q9H2U1 1008 aaKnown RBP6.7□□□□□ -1.34
CD47-205ENST00000517766 SH3GLB2Q9NR46 395 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 IL17RBQ9NRM6 502 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 GJB4Q9NTQ9 266 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 USP40Q9NVE5 1235 aa6.7□□□□□ -1.34
CD47-205ENST00000517766 SAP30BPQ9UHR5 308 aaKnown RBP6.7□□□□□ -1.34
CD47-205ENST00000517766 BAZ2BQ9UIF8 2168 aaKnown RBP6.69□□□□□ -1.34
CD47-205ENST00000517766 SIPA1L1O43166 1804 aa6.69□□□□□ -1.34
CD47-205ENST00000517766 ARFGEF1Q9Y6D6 1849 aa6.69□□□□□ -1.34
CD47-205ENST00000517766 BRCA1P38398 1863 aaKnown RBP6.69□□□□□ -1.34
CD47-205ENST00000517766 FAM237AA0A1B0GTK4 181 aa6.69□□□□□ -1.34
CD47-205ENST00000517766 BTBD18B2RXH4 712 aa6.69□□□□□ -1.34
CD47-205ENST00000517766 F8W031 263 aaPredicted RBP6.69□□□□□ -1.34
CD47-205ENST00000517766 NMT2O60551 498 aa6.69□□□□□ -1.34
CD47-205ENST00000517766 PLEKHA8P1O95397 391 aa6.69□□□□□ -1.34
CD47-205ENST00000517766 F11P03951 625 aa6.69□□□□□ -1.34
CD47-205ENST00000517766 TOP1P11387 765 aaKnown RBP6.69□□□□□ -1.34
CD47-205ENST00000517766 SCG2P13521 617 aa6.69□□□□□ -1.34
CD47-205ENST00000517766 PCSK2P16519 638 aa6.69□□□□□ -1.34
CD47-205ENST00000517766 CHRNA5P30532 468 aa6.69□□□□□ -1.34
CD47-205ENST00000517766 INPP5BP32019 993 aa6.69□□□□□ -1.34
CD47-205ENST00000517766 CRKP46108 304 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms