RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 HOXA13P31271 388 aaPredicted RBP6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 HOXC8P31273 242 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 CLK2P49760 499 aaKnown RBP6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 NAPAP54920 295 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 IRX5P78411 483 aaPredicted RBP6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 FUT2Q10981 343 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 PFKFB3Q16875 520 aaPredicted RBP6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 LY6KQ17RY6 165 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 CELF3Q5SZQ8 465 aaKnown RBP6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 ZNF697Q5TEC3 545 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 RASIP1Q5U651 963 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 MYSM1Q5VVJ2 828 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 WWC2Q6AWC2 1192 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 CPLX2Q6PUV4 134 aaKnown RBP6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 FAM43BQ6ZT52 329 aaPredicted RBP6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 RUFY3Q7L099 469 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 NIPA1Q7RTP0 329 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 HEATR3Q7Z4Q2 680 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 RPUSD2Q8IZ73 545 aaKnown RBP6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 IL31RAQ8NI17 732 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 BICD2Q8TD16 824 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 AFAP1L1Q8TED9 768 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 AFG1LQ8WV93 481 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 TBC1D5Q92609 795 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 BRF1Q92994 677 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 IL17RAQ96F46 866 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SPATA33Q96N06 139 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 NOC4LQ9BVI4 516 aaKnown RBP6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 USP26Q9BXU7 913 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 LRRC2Q9BYS8 371 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 C22orf23Q9BZE7 217 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 IL23AQ9NPF7 189 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 RIC8AQ9NPQ8 531 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 GTF2IRD1Q9UHL9 959 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 NOD1Q9Y239 953 aa6.88□□□□□ -1.31
SCARNA18.1-201ENST00000516330 NFASCO94856 1347 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 STK36Q9NRP7 1315 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 BAZ2BQ9UIF8 2168 aaKnown RBP6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SPATA31C2B4DYI2 1134 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 STXBP3O00186 592 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SOX1O00570 391 aaPredicted RBP6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 EFCAB14O75071 495 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 GNAT1P11488 350 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 MYCLP12524 364 aaPredicted RBP6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 ACTN1P12814 892 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 IFNAR1P17181 557 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 ITGB8P26012 769 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SREBF1P36956 1147 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 ADCY7P51828 1080 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 MRPS9P82933 396 aaKnown RBP6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 AKAP17AQ02040 695 aaKnown RBP6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 PTK7Q13308 1070 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 MTMR1Q13613 665 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 ANKRD1Q15327 319 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 NBPF20Q3BBV1 942 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 HSDL1Q3SXM5 330 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 FAM47CQ5HY64 1035 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 USP17L6PQ6QN14 398 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 Q6ZUG5 572 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 FCHSD1Q86WN1 690 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SKAP1Q86WV1 359 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 TRIM22Q8IYM9 498 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 C7orf31Q8N865 590 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 IL27Q8NEV9 243 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 HERVK_113Q902F9 699 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 COPS5Q92905 334 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 TNPO1Q92973 898 aaKnown RBP6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 ZNF274Q96GC6 653 aaPredicted RBP6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 LRCH3Q96II8 777 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 ANO3Q9BYT9 981 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 PPP1R12CQ9BZL4 782 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 ZMYND12Q9H0C1 365 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 WNT8AQ9H1J5 351 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 MLXIPQ9HAP2 919 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 ZSWIM6Q9HCJ5 1215 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SH3GLB2Q9NR46 395 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 BRPF3Q9ULD4 1205 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 CYP46A1Q9Y6A2 500 aa6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 DDX49Q9Y6V7 483 aaKnown RBP6.87□□□□□ -1.31
SCARNA18.1-201ENST00000516330 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 PRPF3O43395 683 aaKnown RBP6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 CDKL5O76039 1030 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 LGALS2P05162 132 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 CSF2RAP15509 400 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 KCNA2P16389 499 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 DNAJB2P25686 324 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 CDC27P30260 824 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 PSEN2P49810 448 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SLC26A2P50443 739 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 PSMC6P62333 389 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SEMA3FQ13275 785 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 COL9A3Q14050 684 aaPredicted RBP6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 MFSD10Q14728 455 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SHHQ15465 462 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 RAB30Q15771 203 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 KIAA0753Q2KHM9 967 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 TMEM240Q5SV17 173 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 C9orf50Q5SZB4 431 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 TMEM63BQ5T3F8 832 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms