RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 TDP2O95551 362 aa11.07□□□□□ -0.64
SCARNA16-201ENST00000515981 CYP3A4P08684 503 aa11.07□□□□□ -0.64
SCARNA16-201ENST00000515981 ATP2B1P20020 1258 aa11.07□□□□□ -0.64
SCARNA16-201ENST00000515981 TTLL4Q14679 1199 aa11.07□□□□□ -0.64
SCARNA16-201ENST00000515981 NONOQ15233 471 aaKnown RBP eCLIP11.07□□□□□ -0.64
SCARNA16-201ENST00000515981 LRRC41Q15345 812 aa11.07□□□□□ -0.64
SCARNA16-201ENST00000515981 SAFBQ15424 915 aaKnown RBP eCLIP11.07□□□□□ -0.64
SCARNA16-201ENST00000515981 CEP55Q53EZ4 464 aa11.07□□□□□ -0.64
SCARNA16-201ENST00000515981 IFFO2Q5TF58 517 aa11.07□□□□□ -0.64
SCARNA16-201ENST00000515981 MCTP1Q6DN14 999 aa11.07□□□□□ -0.64
SCARNA16-201ENST00000515981 NLRX1Q86UT6 975 aa11.07□□□□□ -0.64
SCARNA16-201ENST00000515981 PLA2G4DQ86XP0 818 aa11.07□□□□□ -0.64
SCARNA16-201ENST00000515981 TEX2Q8IWB9 1127 aa11.07□□□□□ -0.64
SCARNA16-201ENST00000515981 FAM177A1Q8N128 213 aaPredicted RBP11.07□□□□□ -0.64
SCARNA16-201ENST00000515981 OR6J1Q8NGC5 347 aa11.07□□□□□ -0.64
SCARNA16-201ENST00000515981 GJA10Q969M2 543 aa11.07□□□□□ -0.64
SCARNA16-201ENST00000515981 FERMT2Q96AC1 680 aa11.07□□□□□ -0.64
SCARNA16-201ENST00000515981 INTS4Q96HW7 963 aaKnown RBP11.07□□□□□ -0.64
SCARNA16-201ENST00000515981 AP5M1Q9H0R1 490 aa11.07□□□□□ -0.64
SCARNA16-201ENST00000515981 BRMS1Q9HCU9 246 aa11.07□□□□□ -0.64
SCARNA16-201ENST00000515981 SYNRGQ9UMZ2 1314 aa11.07□□□□□ -0.64
SCARNA16-201ENST00000515981 IGLV3-22A0A075B6J6 115 aa11.06□□□□□ -0.64
SCARNA16-201ENST00000515981 MSCO60682 206 aa11.06□□□□□ -0.64
SCARNA16-201ENST00000515981 GGPS1O95749 300 aa11.06□□□□□ -0.64
SCARNA16-201ENST00000515981 C6orf222P0C671 652 aaPredicted RBP11.06□□□□□ -0.64
SCARNA16-201ENST00000515981 UBA1P22314 1058 aaKnown RBP11.06□□□□□ -0.64
SCARNA16-201ENST00000515981 ICAM3P32942 547 aa11.06□□□□□ -0.64
SCARNA16-201ENST00000515981 GJA9P57773 515 aa11.06□□□□□ -0.64
SCARNA16-201ENST00000515981 SP4Q02446 784 aa11.06□□□□□ -0.64
SCARNA16-201ENST00000515981 ARHGAP1Q07960 439 aa11.06□□□□□ -0.64
SCARNA16-201ENST00000515981 LETM2Q2VYF4 491 aa11.06□□□□□ -0.64
SCARNA16-201ENST00000515981 PRR16Q569H4 304 aa11.06□□□□□ -0.64
SCARNA16-201ENST00000515981 GNASQ5JWF2 1037 aa11.06□□□□□ -0.64
SCARNA16-201ENST00000515981 MCTP2Q6DN12 878 aa11.06□□□□□ -0.64
SCARNA16-201ENST00000515981 CYFIP1Q7L576 1253 aa11.06□□□□□ -0.64
SCARNA16-201ENST00000515981 TLK2Q86UE8 772 aa11.06□□□□□ -0.64
SCARNA16-201ENST00000515981 KLHDC9Q8NEP7 349 aa11.06□□□□□ -0.64
SCARNA16-201ENST00000515981 AFG1LQ8WV93 481 aa11.06□□□□□ -0.64
SCARNA16-201ENST00000515981 UPF3AQ9H1J1 476 aaKnown RBP11.06□□□□□ -0.64
SCARNA16-201ENST00000515981 KCNH7Q9NS40 1196 aa11.06□□□□□ -0.64
SCARNA16-201ENST00000515981 FIBPO43427 364 aa11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 STAM2O75886 525 aa11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 GH1P01241 217 aa11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 HSP90AA1P07900 732 aaKnown RBP11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 KCNA2P16389 499 aa11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 SYT1P21579 422 aa11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 CIITAP33076 1130 aa11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 USP11P51784 963 aa11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 ITGB3BPQ13352 177 aaPredicted RBP11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 MTMR1Q13613 665 aa11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 KCNA10Q16322 511 aa11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 FSCN1Q16658 493 aaKnown RBP11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 GNPTABQ3T906 1256 aa11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 CELF3Q5SZQ8 465 aaKnown RBP11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 FOXD4L5Q5VV16 416 aaPredicted RBP11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 MYSM1Q5VVJ2 828 aa11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 FERMT3Q86UX7 667 aa11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 DHX37Q8IY37 1157 aaKnown RBP11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 ARRDC4Q8NCT1 418 aa11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 PPP1R13LQ8WUF5 828 aa11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 FOXD4L4Q8WXT5 416 aaPredicted RBP11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 LENG9Q96B70 501 aa11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 GPRASP2Q96D09 838 aa11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 PAWRQ96IZ0 340 aaKnown RBP11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 DOCK5Q9H7D0 1870 aa11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 AGO4Q9HCK5 861 aaKnown RBP11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 KIF3AQ9Y496 699 aa11.05□□□□□ -0.64
SCARNA16-201ENST00000515981 MKI67P46013 3256 aaKnown RBP11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 DNAH12Q6ZR08 3092 aa11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 CYP3A7-CYP3A51PA0A087WV96 503 aa11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 VPS37CA5D8V6 355 aaPredicted RBP11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 DDX39AO00148 427 aaKnown RBP11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 MSH4O15457 936 aa11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 SLC37A4O43826 429 aa11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 FARP2O94887 1054 aaPredicted RBP11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 MYL3P08590 195 aa11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 TGFB3P10600 412 aa11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 CYP3A7P24462 503 aa11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 GNL2Q13823 731 aaKnown RBP11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 NBR1Q14596 966 aa11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 ZNF174Q15697 407 aa11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 CCSAPQ6IQ19 270 aaPredicted RBP11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 KCNV1Q6PIU1 500 aa11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 NEK8Q86SG6 692 aa11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 RNF180Q86T96 592 aa11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 NOSTRINQ8IVI9 506 aa11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 SPATA33Q96N06 139 aa11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 FOXP1Q9H334 677 aaPredicted RBP11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 MLXIPQ9HAP2 919 aa11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 SPC25Q9HBM1 224 aa11.04□□□□□ -0.64
SCARNA16-201ENST00000515981 FRMPD3Q5JV73 1810 aa11.03□□□□□ -0.64
SCARNA16-201ENST00000515981 NKRFO15226 690 aaKnown RBP eCLIP11.03□□□□□ -0.64
SCARNA16-201ENST00000515981 DHX15O43143 795 aaKnown RBP11.03□□□□□ -0.64
SCARNA16-201ENST00000515981 CCNT1O60563 726 aaKnown RBP11.03□□□□□ -0.64
SCARNA16-201ENST00000515981 U2AF2P26368 475 aaKnown RBP eCLIP11.03□□□□□ -0.64
SCARNA16-201ENST00000515981 TOB1P50616 345 aaPredicted RBP11.03□□□□□ -0.64
SCARNA16-201ENST00000515981 ACLYP53396 1101 aa11.03□□□□□ -0.64
SCARNA16-201ENST00000515981 LAMC2Q13753 1193 aa11.03□□□□□ -0.64
SCARNA16-201ENST00000515981 NEDD9Q14511 834 aa11.03□□□□□ -0.64
SCARNA16-201ENST00000515981 HSDL1Q3SXM5 330 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms