RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, human

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNF8-215	ENST00000515572	SET	Q01105	290 aa	Predicted RBP	13.55	□□□□□ -0.24
SNF8-215	ENST00000515572	GUCY1B3	Q02153	619 aa		13.55	□□□□□ -0.24
SNF8-215	ENST00000515572	BRDT	Q58F21	947 aa	Predicted RBP	13.55	□□□□□ -0.24
SNF8-215	ENST00000515572	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.55	□□□□□ -0.24
SNF8-215	ENST00000515572	OXER1	Q8TDS5	423 aa		13.55	□□□□□ -0.24
SNF8-215	ENST00000515572	TBCK	Q8TEA7	893 aa		13.55	□□□□□ -0.24
SNF8-215	ENST00000515572	TNFRSF25	Q93038	417 aa		13.55	□□□□□ -0.24
SNF8-215	ENST00000515572	LENG1	Q96BZ8	264 aa	Predicted RBP	13.55	□□□□□ -0.24
SNF8-215	ENST00000515572	ZFP91	Q96JP5	570 aa	Predicted RBP	13.55	□□□□□ -0.24
SNF8-215	ENST00000515572	NAP1L4	Q99733	375 aa	Known RBP	13.55	□□□□□ -0.24
SNF8-215	ENST00000515572	SENP7	Q9BQF6	1050 aa		13.55	□□□□□ -0.24
SNF8-215	ENST00000515572	DOCK5	Q9H7D0	1870 aa		13.55	□□□□□ -0.24
SNF8-215	ENST00000515572	KBTBD13	C9JR72	458 aa		13.54	□□□□□ -0.24
SNF8-215	ENST00000515572		H3BQV1	296 aa		13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	DYNC1LI2	O43237	492 aa	Predicted RBP	13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	PGK1	P00558	417 aa		13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	C6orf222	P0C671	652 aa	Predicted RBP	13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	UBA1	P22314	1058 aa	Known RBP	13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	CPT1A	P50416	773 aa		13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	NR5A1	Q13285	461 aa		13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	LAMC2	Q13753	1193 aa		13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	BECN1	Q14457	450 aa		13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	NEDD9	Q14511	834 aa		13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	LRRC41	Q15345	812 aa		13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	LY6K	Q17RY6	165 aa		13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	GNAS	Q5JWF2	1037 aa		13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	IFFO2	Q5TF58	517 aa		13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	LARP1B	Q659C4	914 aa	Known RBP	13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	MOXD1	Q6UVY6	613 aa		13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	PIK3AP1	Q6ZUJ8	805 aa		13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	NEK8	Q86SG6	692 aa		13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	DHX37	Q8IY37	1157 aa	Known RBP	13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	PCSK9	Q8NBP7	692 aa	Known RBP	13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	KLHDC9	Q8NEP7	349 aa		13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	OR6J1	Q8NGC5	347 aa		13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	EMID1	Q96A84	441 aa	Predicted RBP	13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	TSEN34	Q9BSV6	310 aa	Known RBP	13.54	□□□□□ -0.24
SNF8-215	ENST00000515572	IGLV3-22	A0A075B6J6	115 aa		13.53	□□□□□ -0.24
SNF8-215	ENST00000515572	FAM86B1	E9PN63	330 aa		13.53	□□□□□ -0.24
SNF8-215	ENST00000515572	ZEB2	O60315	1214 aa		13.53	□□□□□ -0.24
SNF8-215	ENST00000515572	FARP2	O94887	1054 aa	Predicted RBP	13.53	□□□□□ -0.24
SNF8-215	ENST00000515572	MYCN	P04198	464 aa	Predicted RBP	13.53	□□□□□ -0.24
SNF8-215	ENST00000515572	FAM86B2	P0C5J1	330 aa		13.53	□□□□□ -0.24
SNF8-215	ENST00000515572	GCFC2	P16383	781 aa	Known RBP	13.53	□□□□□ -0.24
SNF8-215	ENST00000515572	ARHGAP1	Q07960	439 aa		13.53	□□□□□ -0.24
SNF8-215	ENST00000515572	SEMA3F	Q13275	785 aa		13.53	□□□□□ -0.24
SNF8-215	ENST00000515572	GNL2	Q13823	731 aa	Known RBP	13.53	□□□□□ -0.24
SNF8-215	ENST00000515572	FSCN1	Q16658	493 aa	Known RBP	13.53	□□□□□ -0.24
SNF8-215	ENST00000515572	INF2	Q27J81	1249 aa		13.53	□□□□□ -0.24
SNF8-215	ENST00000515572	CELF3	Q5SZQ8	465 aa	Known RBP	13.53	□□□□□ -0.24
SNF8-215	ENST00000515572	TMEM63B	Q5T3F8	832 aa		13.53	□□□□□ -0.24
SNF8-215	ENST00000515572	GJC2	Q5T442	439 aa	Predicted RBP	13.53	□□□□□ -0.24
SNF8-215	ENST00000515572	PLA2G4D	Q86XP0	818 aa		13.53	□□□□□ -0.24
SNF8-215	ENST00000515572	KCNH7	Q9NS40	1196 aa		13.53	□□□□□ -0.24
SNF8-215	ENST00000515572	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	MOXD2P	A6NHM9	499 aa		13.52	□□□□□ -0.25
SNF8-215	ENST00000515572		A6NJR5	290 aa		13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	CTAGE5	O15320	804 aa		13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	KPNA6	O60684	536 aa		13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	GGPS1	O95749	300 aa		13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	PDIA4	P13667	645 aa	Known RBP	13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	KCNA2	P16389	499 aa		13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	CYP3A7	P24462	503 aa		13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	U2AF2	P26368	475 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	MNX1	P50219	401 aa	Predicted RBP	13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	SP2	Q02086	613 aa		13.52	□□□□□ -0.25
SNF8-215	ENST00000515572		Q4G0T1	1027 aa		13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	PRR16	Q569H4	304 aa		13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	MYSM1	Q5VVJ2	828 aa		13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	PPP4R3A	Q6IN85	833 aa		13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	METTL7B	Q6UX53	244 aa		13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	NECAB2	Q7Z6G3	386 aa		13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	NOSTRIN	Q8IVI9	506 aa		13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	PPTC7	Q8NI37	304 aa		13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	CYP2W1	Q8TAV3	490 aa		13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	COPS5	Q92905	334 aa		13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	MLXIP	Q9HAP2	919 aa		13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	AGO4	Q9HCK5	861 aa	Known RBP	13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	PHF24	Q9UPV7	400 aa		13.52	□□□□□ -0.25
SNF8-215	ENST00000515572	NFASC	O94856	1347 aa		13.51	□□□□□ -0.25
SNF8-215	ENST00000515572	AR	P10275	920 aa		13.51	□□□□□ -0.25
SNF8-215	ENST00000515572	ACLY	P53396	1101 aa		13.51	□□□□□ -0.25
SNF8-215	ENST00000515572	KCNA10	Q16322	511 aa		13.51	□□□□□ -0.25
SNF8-215	ENST00000515572	LETM2	Q2VYF4	491 aa		13.51	□□□□□ -0.25
SNF8-215	ENST00000515572	EARS2	Q5JPH6	523 aa	Known RBP	13.51	□□□□□ -0.25
SNF8-215	ENST00000515572	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.51	□□□□□ -0.25
SNF8-215	ENST00000515572	UBE2Q1	Q7Z7E8	422 aa		13.51	□□□□□ -0.25
SNF8-215	ENST00000515572	LENG9	Q96B70	501 aa		13.51	□□□□□ -0.25
SNF8-215	ENST00000515572	SPATA33	Q96N06	139 aa		13.51	□□□□□ -0.25
SNF8-215	ENST00000515572	MBOAT7	Q96N66	472 aa		13.51	□□□□□ -0.25
SNF8-215	ENST00000515572	SDF4	Q9BRK5	362 aa		13.51	□□□□□ -0.25
SNF8-215	ENST00000515572	C11orf49	Q9H6J7	331 aa		13.51	□□□□□ -0.25
SNF8-215	ENST00000515572	POLR3E	Q9NVU0	708 aa		13.51	□□□□□ -0.25
SNF8-215	ENST00000515572	MYADML2	A6NDP7	307 aa		13.5	□□□□□ -0.25
SNF8-215	ENST00000515572	FAM205C	A6NFA0	338 aa		13.5	□□□□□ -0.25
SNF8-215	ENST00000515572	IPO5	O00410	1097 aa	Known RBP	13.5	□□□□□ -0.25
SNF8-215	ENST00000515572	NOP56	O00567	594 aa	Known RBP	13.5	□□□□□ -0.25
SNF8-215	ENST00000515572	EDIL3	O43854	480 aa		13.5	□□□□□ -0.25
SNF8-215	ENST00000515572	CCNT1	O60563	726 aa	Known RBP	13.5	□□□□□ -0.25
SNF8-215	ENST00000515572	ATP9A	O75110	1047 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms