RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 AKAP17AQ02040 695 aaKnown RBP14.66□□□□□ -0.06
CLCN3-210ENST00000515420 PTPN11Q06124 597 aaPredicted RBP14.66□□□□□ -0.06
CLCN3-210ENST00000515420 AP3B2Q13367 1082 aa14.66□□□□□ -0.06
CLCN3-210ENST00000515420 DGKDQ16760 1214 aa14.66□□□□□ -0.06
CLCN3-210ENST00000515420 CELF3Q5SZQ8 465 aaKnown RBP14.66□□□□□ -0.06
CLCN3-210ENST00000515420 MYSM1Q5VVJ2 828 aa14.66□□□□□ -0.06
CLCN3-210ENST00000515420 MCTP2Q6DN12 878 aa14.66□□□□□ -0.06
CLCN3-210ENST00000515420 TYW1BQ6NUM6 668 aa14.66□□□□□ -0.06
CLCN3-210ENST00000515420 NFRKBQ6P4R8 1299 aa14.66□□□□□ -0.06
CLCN3-210ENST00000515420 SH3RF1Q7Z6J0 888 aa14.66□□□□□ -0.06
CLCN3-210ENST00000515420 TDHQ8IZJ6 230 aa14.66□□□□□ -0.06
CLCN3-210ENST00000515420 AFG1LQ8WV93 481 aa14.66□□□□□ -0.06
CLCN3-210ENST00000515420 GPRASP2Q96D09 838 aa14.66□□□□□ -0.06
CLCN3-210ENST00000515420 CDHR1Q96JP9 859 aa14.66□□□□□ -0.06
CLCN3-210ENST00000515420 SENP7Q9BQF6 1050 aa14.66□□□□□ -0.06
CLCN3-210ENST00000515420 UBE2OQ9C0C9 1292 aaKnown RBP14.66□□□□□ -0.06
CLCN3-210ENST00000515420 SPATA31C2B4DYI2 1134 aa14.65□□□□□ -0.06
CLCN3-210ENST00000515420 MAFGO15525 162 aa14.65□□□□□ -0.06
CLCN3-210ENST00000515420 RAG1P15918 1043 aa14.65□□□□□ -0.06
CLCN3-210ENST00000515420 CLK2P49760 499 aaKnown RBP14.65□□□□□ -0.06
CLCN3-210ENST00000515420 MDM2Q00987 491 aaPredicted RBP14.65□□□□□ -0.06
CLCN3-210ENST00000515420 NEDD9Q14511 834 aa14.65□□□□□ -0.06
CLCN3-210ENST00000515420 ANKRD1Q15327 319 aa14.65□□□□□ -0.06
CLCN3-210ENST00000515420 PKN1Q16512 942 aa14.65□□□□□ -0.06
CLCN3-210ENST00000515420 UBE2SQ16763 222 aa14.65□□□□□ -0.06
CLCN3-210ENST00000515420 NLRX1Q86UT6 975 aa14.65□□□□□ -0.06
CLCN3-210ENST00000515420 FAM177A1Q8N128 213 aaPredicted RBP14.65□□□□□ -0.06
CLCN3-210ENST00000515420 ZMYND12Q9H0C1 365 aa14.65□□□□□ -0.06
CLCN3-210ENST00000515420 PCDHA6Q9UN73 950 aa14.65□□□□□ -0.06
CLCN3-210ENST00000515420 PCDHA8Q9Y5H6 950 aa14.65□□□□□ -0.06
CLCN3-210ENST00000515420 SMCO2A6NFE2 343 aa14.64□□□□□ -0.07
CLCN3-210ENST00000515420 CPLX1O14810 134 aa14.64□□□□□ -0.07
CLCN3-210ENST00000515420 PPFIA4O75335 1185 aa14.64□□□□□ -0.07
CLCN3-210ENST00000515420 GGPS1O95749 300 aa14.64□□□□□ -0.07
CLCN3-210ENST00000515420 TIMP1P01033 207 aa14.64□□□□□ -0.07
CLCN3-210ENST00000515420 SUPT20HL2P0C7V6 817 aa14.64□□□□□ -0.07
CLCN3-210ENST00000515420 FXR1P51114 621 aaKnown RBP eCLIP14.64□□□□□ -0.07
CLCN3-210ENST00000515420 PSMC6P62333 389 aa14.64□□□□□ -0.07
CLCN3-210ENST00000515420 SP2Q02086 613 aa14.64□□□□□ -0.07
CLCN3-210ENST00000515420 CPLX2Q6PUV4 134 aaKnown RBP14.64□□□□□ -0.07
CLCN3-210ENST00000515420 SESTD1Q86VW0 696 aa14.64□□□□□ -0.07
CLCN3-210ENST00000515420 TRIM22Q8IYM9 498 aa14.64□□□□□ -0.07
CLCN3-210ENST00000515420 GIMAP8Q8ND71 665 aaPredicted RBP14.64□□□□□ -0.07
CLCN3-210ENST00000515420 CCDC148Q8NFR7 591 aa14.64□□□□□ -0.07
CLCN3-210ENST00000515420 BADQ92934 168 aa14.64□□□□□ -0.07
CLCN3-210ENST00000515420 SPATA33Q96N06 139 aa14.64□□□□□ -0.07
CLCN3-210ENST00000515420 KATNAL1Q9BW62 490 aa14.64□□□□□ -0.07
CLCN3-210ENST00000515420 SH3GLB2Q9NR46 395 aa14.64□□□□□ -0.07
CLCN3-210ENST00000515420 DOCK5Q9H7D0 1870 aa14.63□□□□□ -0.07
CLCN3-210ENST00000515420 F2P00734 622 aa14.63□□□□□ -0.07
CLCN3-210ENST00000515420 GNA11P29992 359 aa14.63□□□□□ -0.07
CLCN3-210ENST00000515420 CCT2P78371 535 aaKnown RBP14.63□□□□□ -0.07
CLCN3-210ENST00000515420 SEMA3FQ13275 785 aa14.63□□□□□ -0.07
CLCN3-210ENST00000515420 NBPF20Q3BBV1 942 aa14.63□□□□□ -0.07
CLCN3-210ENST00000515420 LRIT3Q3SXY7 679 aa14.63□□□□□ -0.07
CLCN3-210ENST00000515420 METTL7BQ6UX53 244 aa14.63□□□□□ -0.07
CLCN3-210ENST00000515420 PHKBQ93100 1093 aa14.63□□□□□ -0.07
CLCN3-210ENST00000515420 ANO3Q9BYT9 981 aa14.63□□□□□ -0.07
CLCN3-210ENST00000515420 MLXIPQ9HAP2 919 aa14.63□□□□□ -0.07
CLCN3-210ENST00000515420 NCOA5Q9HCD5 579 aaKnown RBP14.63□□□□□ -0.07
CLCN3-210ENST00000515420 C6orf50Q9HD87 102 aa14.63□□□□□ -0.07
CLCN3-210ENST00000515420 RTEL1Q9NZ71 1219 aa14.63□□□□□ -0.07
CLCN3-210ENST00000515420 UBIAD1Q9Y5Z9 338 aa14.63□□□□□ -0.07
CLCN3-210ENST00000515420 LAMA3Q16787 3333 aa14.62□□□□□ -0.07
CLCN3-210ENST00000515420 B4GALT4O60513 344 aa14.62□□□□□ -0.07
CLCN3-210ENST00000515420 CDKL5O76039 1030 aa14.62□□□□□ -0.07
CLCN3-210ENST00000515420 DEXIO95424 95 aa14.62□□□□□ -0.07
CLCN3-210ENST00000515420 ITGB8P26012 769 aa14.62□□□□□ -0.07
CLCN3-210ENST00000515420 SREBF1P36956 1147 aa14.62□□□□□ -0.07
CLCN3-210ENST00000515420 FPGSQ05932 587 aa14.62□□□□□ -0.07
CLCN3-210ENST00000515420 HSDL1Q3SXM5 330 aa14.62□□□□□ -0.07
CLCN3-210ENST00000515420 C8orf34Q49A92 452 aa14.62□□□□□ -0.07
CLCN3-210ENST00000515420 MFSD5Q6N075 450 aa14.62□□□□□ -0.07
CLCN3-210ENST00000515420 BICD2Q8TD16 824 aa14.62□□□□□ -0.07
CLCN3-210ENST00000515420 KAT2BQ92831 832 aa14.62□□□□□ -0.07
CLCN3-210ENST00000515420 SLC26A6Q9BXS9 759 aa14.62□□□□□ -0.07
CLCN3-210ENST00000515420 HAS3O00219 553 aa14.61□□□□□ -0.07
CLCN3-210ENST00000515420 SEC24BO95487 1268 aa14.61□□□□□ -0.07
CLCN3-210ENST00000515420 ITGB5P18084 799 aa14.61□□□□□ -0.07
CLCN3-210ENST00000515420 SSRP1Q08945 709 aaKnown RBP14.61□□□□□ -0.07
CLCN3-210ENST00000515420 MTMR1Q13613 665 aa14.61□□□□□ -0.07
CLCN3-210ENST00000515420 NIPA1Q7RTP0 329 aa14.61□□□□□ -0.07
CLCN3-210ENST00000515420 REXO1Q8N1G1 1221 aaKnown RBP14.61□□□□□ -0.07
CLCN3-210ENST00000515420 TMEM199Q8N511 208 aa14.61□□□□□ -0.07
CLCN3-210ENST00000515420 ZFP91Q96JP5 570 aaPredicted RBP14.61□□□□□ -0.07
CLCN3-210ENST00000515420 SLKQ9H2G2 1235 aaPredicted RBP14.61□□□□□ -0.07
CLCN3-210ENST00000515420 HIPK3Q9H422 1215 aa14.61□□□□□ -0.07
CLCN3-210ENST00000515420 JADE2Q9NQC1 790 aa14.61□□□□□ -0.07
CLCN3-210ENST00000515420 NOP56O00567 594 aaKnown RBP14.6□□□□□ -0.07
CLCN3-210ENST00000515420 PFKFB2O60825 505 aa14.6□□□□□ -0.07
CLCN3-210ENST00000515420 AK2P54819 239 aa14.6□□□□□ -0.07
CLCN3-210ENST00000515420 PPIGQ13427 754 aaKnown RBP eCLIP14.6□□□□□ -0.07
CLCN3-210ENST00000515420 GPR153Q6NV75 609 aa14.6□□□□□ -0.07
CLCN3-210ENST00000515420 CYFIP1Q7L576 1253 aa14.6□□□□□ -0.07
CLCN3-210ENST00000515420 CRYGNQ8WXF5 182 aa14.6□□□□□ -0.07
CLCN3-210ENST00000515420 MXRA8Q9BRK3 442 aa14.6□□□□□ -0.07
CLCN3-210ENST00000515420 NOC4LQ9BVI4 516 aaKnown RBP14.6□□□□□ -0.07
CLCN3-210ENST00000515420 TRPV6Q9H1D0 765 aa14.6□□□□□ -0.07
CLCN3-210ENST00000515420 TPCN1Q9ULQ1 816 aa14.6□□□□□ -0.07
CLCN3-210ENST00000515420 STK36Q9NRP7 1315 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms