RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 ANO3Q9BYT9 981 aa13.19□□□□□ -0.3
SUB1-213ENST00000515355 GLT8D2Q9H1C3 349 aa13.19□□□□□ -0.3
SUB1-213ENST00000515355 POLR3EQ9NVU0 708 aa13.19□□□□□ -0.3
SUB1-213ENST00000515355 A0A0U1RQG5 324 aaPredicted RBP13.18□□□□□ -0.3
SUB1-213ENST00000515355 DCDC2CA8MYV0 355 aa13.18□□□□□ -0.3
SUB1-213ENST00000515355 DEXIO95424 95 aa13.18□□□□□ -0.3
SUB1-213ENST00000515355 LARGE1O95461 756 aa13.18□□□□□ -0.3
SUB1-213ENST00000515355 FOSP01100 380 aaPredicted RBP13.18□□□□□ -0.3
SUB1-213ENST00000515355 GNA11P29992 359 aa13.18□□□□□ -0.3
SUB1-213ENST00000515355 MDM2Q00987 491 aaPredicted RBP13.18□□□□□ -0.3
SUB1-213ENST00000515355 SP2Q02086 613 aa13.18□□□□□ -0.3
SUB1-213ENST00000515355 ARHGAP1Q07960 439 aa13.18□□□□□ -0.3
SUB1-213ENST00000515355 ITGA7Q13683 1181 aa13.18□□□□□ -0.3
SUB1-213ENST00000515355 LAMC2Q13753 1193 aa13.18□□□□□ -0.3
SUB1-213ENST00000515355 KCNV1Q6PIU1 500 aa13.18□□□□□ -0.3
SUB1-213ENST00000515355 CCDC148Q8NFR7 591 aa13.18□□□□□ -0.3
SUB1-213ENST00000515355 RASGRP4Q8TDF6 673 aa13.18□□□□□ -0.3
SUB1-213ENST00000515355 SPATA33Q96N06 139 aa13.18□□□□□ -0.3
SUB1-213ENST00000515355 LBHD1Q9BQE6 289 aaPredicted RBP13.18□□□□□ -0.3
SUB1-213ENST00000515355 MTG1Q9BT17 334 aaPredicted RBP13.18□□□□□ -0.3
SUB1-213ENST00000515355 ALDH8A1Q9H2A2 487 aaPredicted RBP13.18□□□□□ -0.3
SUB1-213ENST00000515355 TMEM39AQ9NV64 488 aa13.18□□□□□ -0.3
SUB1-213ENST00000515355 NID2Q14112 1375 aa13.18□□□□□ -0.3
SUB1-213ENST00000515355 ELP1O95163 1332 aa13.17□□□□□ -0.3
SUB1-213ENST00000515355 ARVCFO00192 962 aa13.17□□□□□ -0.3
SUB1-213ENST00000515355 NOP56O00567 594 aaKnown RBP13.17□□□□□ -0.3
SUB1-213ENST00000515355 FIBPO43427 364 aa13.17□□□□□ -0.3
SUB1-213ENST00000515355 STAM2O75886 525 aa13.17□□□□□ -0.3
SUB1-213ENST00000515355 CABYRO75952 493 aa13.17□□□□□ -0.3
SUB1-213ENST00000515355 MMP3P08254 477 aa13.17□□□□□ -0.3
SUB1-213ENST00000515355 UBA1P22314 1058 aaKnown RBP13.17□□□□□ -0.3
SUB1-213ENST00000515355 CELF3Q5SZQ8 465 aaKnown RBP13.17□□□□□ -0.3
SUB1-213ENST00000515355 CYFIP1Q7L576 1253 aa13.17□□□□□ -0.3
SUB1-213ENST00000515355 SH3RF1Q7Z6J0 888 aa13.17□□□□□ -0.3
SUB1-213ENST00000515355 REXO1Q8N1G1 1221 aaKnown RBP13.17□□□□□ -0.3
SUB1-213ENST00000515355 BICD2Q8TD16 824 aa13.17□□□□□ -0.3
SUB1-213ENST00000515355 UIMC1Q96RL1 719 aa13.17□□□□□ -0.3
SUB1-213ENST00000515355 ZMYND12Q9H0C1 365 aa13.17□□□□□ -0.3
SUB1-213ENST00000515355 BCAS3Q9H6U6 928 aa13.17□□□□□ -0.3
SUB1-213ENST00000515355 ORC3Q9UBD5 711 aaPredicted RBP13.17□□□□□ -0.3
SUB1-213ENST00000515355 FRMPD3Q5JV73 1810 aa13.17□□□□□ -0.3
SUB1-213ENST00000515355 A6NJR5 290 aa13.16□□□□□ -0.3
SUB1-213ENST00000515355 SPATA31C2B4DYI2 1134 aa13.16□□□□□ -0.3
SUB1-213ENST00000515355 ADAMTS3O15072 1205 aa13.16□□□□□ -0.3
SUB1-213ENST00000515355 CLTBP09497 229 aa13.16□□□□□ -0.3
SUB1-213ENST00000515355 TGFB3P10600 412 aa13.16□□□□□ -0.3
SUB1-213ENST00000515355 PURAQ00577 322 aaKnown RBP13.16□□□□□ -0.3
SUB1-213ENST00000515355 MTMR1Q13613 665 aa13.16□□□□□ -0.3
SUB1-213ENST00000515355 NEDD9Q14511 834 aa13.16□□□□□ -0.3
SUB1-213ENST00000515355 DGKDQ16760 1214 aa13.16□□□□□ -0.3
SUB1-213ENST00000515355 XRRA1Q6P2D8 792 aa13.16□□□□□ -0.3
SUB1-213ENST00000515355 INPP4AQ96PE3 977 aaPredicted RBP13.16□□□□□ -0.3
SUB1-213ENST00000515355 ALG1Q9BT22 464 aa13.16□□□□□ -0.3
SUB1-213ENST00000515355 KCNJ14Q9UNX9 436 aa13.16□□□□□ -0.3
SUB1-213ENST00000515355 COLQQ9Y215 455 aaPredicted RBP13.16□□□□□ -0.3
SUB1-213ENST00000515355 FRMPD4Q14CM0 1322 aa13.15□□□□□ -0.3
SUB1-213ENST00000515355 TLR3O15455 904 aaKnown RBP13.15□□□□□ -0.3
SUB1-213ENST00000515355 KPNA6O60684 536 aa13.15□□□□□ -0.3
SUB1-213ENST00000515355 ZNF286BP0CG31 522 aa13.15□□□□□ -0.3
SUB1-213ENST00000515355 RAG1P15918 1043 aa13.15□□□□□ -0.3
SUB1-213ENST00000515355 XBP1P17861 261 aa13.15□□□□□ -0.3
SUB1-213ENST00000515355 ITGB5P18084 799 aa13.15□□□□□ -0.3
SUB1-213ENST00000515355 MAGEA10P43363 369 aaPredicted RBP13.15□□□□□ -0.3
SUB1-213ENST00000515355 NKX3-2P78367 333 aa13.15□□□□□ -0.3
SUB1-213ENST00000515355 ARHGAP4P98171 946 aa13.15□□□□□ -0.3
SUB1-213ENST00000515355 AP3B2Q13367 1082 aa13.15□□□□□ -0.3
SUB1-213ENST00000515355 SNX17Q15036 470 aa13.15□□□□□ -0.3
SUB1-213ENST00000515355 NBPF20Q3BBV1 942 aa13.15□□□□□ -0.3
SUB1-213ENST00000515355 HSDL1Q3SXM5 330 aa13.15□□□□□ -0.3
SUB1-213ENST00000515355 UTP14CQ5TAP6 766 aaKnown RBP13.15□□□□□ -0.3
SUB1-213ENST00000515355 MYSM1Q5VVJ2 828 aa13.15□□□□□ -0.3
SUB1-213ENST00000515355 CCDC83Q8IWF9 413 aa13.15□□□□□ -0.3
SUB1-213ENST00000515355 CYP2W1Q8TAV3 490 aa13.15□□□□□ -0.3
SUB1-213ENST00000515355 GTF3C6Q969F1 213 aa13.15□□□□□ -0.3
SUB1-213ENST00000515355 KIF2CQ99661 725 aa13.15□□□□□ -0.3
SUB1-213ENST00000515355 TRPV6Q9H1D0 765 aa13.15□□□□□ -0.3
SUB1-213ENST00000515355 PDLIM7Q9NR12 457 aa13.15□□□□□ -0.3
SUB1-213ENST00000515355 GJB4Q9NTQ9 266 aa13.15□□□□□ -0.3
SUB1-213ENST00000515355 LIMCH1Q9UPQ0 1083 aa13.15□□□□□ -0.3
SUB1-213ENST00000515355 MROH7Q68CQ1 1323 aa13.14□□□□□ -0.31
SUB1-213ENST00000515355 LRRC37A2A6NM11 1700 aa13.14□□□□□ -0.31
SUB1-213ENST00000515355 ESYT2A0FGR8 921 aa13.14□□□□□ -0.31
SUB1-213ENST00000515355 TRIM43BA6NCK2 446 aa13.14□□□□□ -0.31
SUB1-213ENST00000515355 ST18O60284 1047 aa13.14□□□□□ -0.31
SUB1-213ENST00000515355 JAK2O60674 1132 aa13.14□□□□□ -0.31
SUB1-213ENST00000515355 ATP9AO75110 1047 aa13.14□□□□□ -0.31
SUB1-213ENST00000515355 CTDNEP1O95476 244 aa13.14□□□□□ -0.31
SUB1-213ENST00000515355 RBM25P49756 843 aaKnown RBP13.14□□□□□ -0.31
SUB1-213ENST00000515355 CLK2P49760 499 aaKnown RBP13.14□□□□□ -0.31
SUB1-213ENST00000515355 FAAP100Q0VG06 881 aa13.14□□□□□ -0.31
SUB1-213ENST00000515355 SEMA3FQ13275 785 aa13.14□□□□□ -0.31
SUB1-213ENST00000515355 RABEP1Q15276 862 aa13.14□□□□□ -0.31
SUB1-213ENST00000515355 C1orf53Q5VUE5 145 aa13.14□□□□□ -0.31
SUB1-213ENST00000515355 PPTC7Q8NI37 304 aa13.14□□□□□ -0.31
SUB1-213ENST00000515355 BADQ92934 168 aa13.14□□□□□ -0.31
SUB1-213ENST00000515355 TRIM43Q96BQ3 446 aaPredicted RBP13.14□□□□□ -0.31
SUB1-213ENST00000515355 GPRASP2Q96D09 838 aa13.14□□□□□ -0.31
SUB1-213ENST00000515355 IL17RAQ96F46 866 aa13.14□□□□□ -0.31
SUB1-213ENST00000515355 CDHR1Q96JP9 859 aa13.14□□□□□ -0.31
SUB1-213ENST00000515355 MXRA8Q9BRK3 442 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms